Name: rs35514612
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35514612

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:3837333-3837341 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delCC / delC / dupC / dupCC / dup(…
delCC / delC / dupC / dupCC / dup(C)₄ / dup(C)₅ / dup(C)₆
Variation Type: Indel Insertion and Deletion
Frequency: (C)₉=0.1936 (950/4908, ALFA)
(C)₉=0.1635 (791/4838, 1000G)
(C)₉=0.1154 (517/4480, Estonian) (+ 4 more)
(C)₉=0.1292 (498/3854, ALSPAC)
(C)₉=0.1297 (481/3708, TWINSUK)
(C)₉=0.113 (68/600, NorthernSweden)
(C)₉=0.07 (3/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LRRN1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4908	CCCCCCCCC=0.1936	CCCCCCC=0.0000, CCCCCCCC=0.8064, CCCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000, CCCCCCCCCCCCCC=0.0000, CCCCCCCCCCCCCCC=0.0000	0.103912	0.716789	0.179299	32
European	Sub	4620	CCCCCCCCC=0.1450	CCCCCCC=0.0000, CCCCCCCC=0.8550, CCCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000, CCCCCCCCCCCCCC=0.0000, CCCCCCCCCCCCCCC=0.0000	0.049784	0.75974	0.190476	32
African	Sub	242	CCCCCCCCC=1.000	CCCCCCC=0.000, CCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
African Others	Sub	8	CCCCCCCCC=1.0	CCCCCCC=0.0, CCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
African American	Sub	234	CCCCCCCCC=1.000	CCCCCCC=0.000, CCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCC=0.000, CCCCCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
Asian	Sub	0	CCCCCCCCC=0	CCCCCCC=0, CCCCCCCC=0, CCCCCCCCCC=0, CCCCCCCCCCC=0, CCCCCCCCCCCCC=0, CCCCCCCCCCCCCC=0, CCCCCCCCCCCCCCC=0	0	0	0	N/A
East Asian	Sub	0	CCCCCCCCC=0	CCCCCCC=0, CCCCCCCC=0, CCCCCCCCCC=0, CCCCCCCCCCC=0, CCCCCCCCCCCCC=0, CCCCCCCCCCCCCC=0, CCCCCCCCCCCCCCC=0	0	0	0	N/A
Other Asian	Sub	0	CCCCCCCCC=0	CCCCCCC=0, CCCCCCCC=0, CCCCCCCCCC=0, CCCCCCCCCCC=0, CCCCCCCCCCCCC=0, CCCCCCCCCCCCCC=0, CCCCCCCCCCCCCCC=0	0	0	0	N/A
Latin American 1	Sub	4	CCCCCCCCC=1.0	CCCCCCC=0.0, CCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	10	CCCCCCCCC=1.0	CCCCCCC=0.0, CCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
South Asian	Sub	6	CCCCCCCCC=1.0	CCCCCCC=0.0, CCCCCCCC=0.0, CCCCCCCCCC=0.0, CCCCCCCCCCC=0.0, CCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCC=0.0, CCCCCCCCCCCCCCC=0.0	1.0	0.0	0.0	N/A
Other	Sub	26	CCCCCCCCC=0.69	CCCCCCC=0.00, CCCCCCCC=0.31, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCC=0.00, CCCCCCCCCCCCCCC=0.00	0.692308	0.307692	0.0	8

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	4908	(C)₉=0.1936	delCC=0.0000, delC=0.8064, dupC=0.0000, dupCC=0.0000, dup(C)₄=0.0000, dup(C)₅=0.0000, dup(C)₆=0.0000
Allele Frequency Aggregator	European	Sub	4620	(C)₉=0.1450	delCC=0.0000, delC=0.8550, dupC=0.0000, dupCC=0.0000, dup(C)₄=0.0000, dup(C)₅=0.0000, dup(C)₆=0.0000
Allele Frequency Aggregator	African	Sub	242	(C)₉=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dup(C)₄=0.000, dup(C)₅=0.000, dup(C)₆=0.000
Allele Frequency Aggregator	Other	Sub	26	(C)₉=0.69	delCC=0.00, delC=0.31, dupC=0.00, dupCC=0.00, dup(C)₄=0.00, dup(C)₅=0.00, dup(C)₆=0.00
Allele Frequency Aggregator	Latin American 2	Sub	10	(C)₉=1.0	delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dup(C)₄=0.0, dup(C)₅=0.0, dup(C)₆=0.0
Allele Frequency Aggregator	South Asian	Sub	6	(C)₉=1.0	delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dup(C)₄=0.0, dup(C)₅=0.0, dup(C)₆=0.0
Allele Frequency Aggregator	Latin American 1	Sub	4	(C)₉=1.0	delCC=0.0, delC=0.0, dupC=0.0, dupCC=0.0, dup(C)₄=0.0, dup(C)₅=0.0, dup(C)₆=0.0
Allele Frequency Aggregator	Asian	Sub	0	(C)₉=0	delCC=0, delC=0, dupC=0, dupCC=0, dup(C)₄=0, dup(C)₅=0, dup(C)₆=0
1000Genomes	Global	Study-wide	4838	(C)₉=0.1635	delC=0.8365
1000Genomes	African	Sub	1319	(C)₉=0.2714	delC=0.7286
1000Genomes	Europe	Sub	1006	(C)₉=0.1491	delC=0.8509
1000Genomes	South Asian	Sub	936	(C)₉=0.128	delC=0.872
1000Genomes	East Asian	Sub	886	(C)₉=0.067	delC=0.933
1000Genomes	American	Sub	691	(C)₉=0.151	delC=0.849
Genetic variation in the Estonian population	Estonian	Study-wide	4480	(C)₉=0.1154	delC=0.8846
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(C)₉=0.1292	delC=0.8708
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(C)₉=0.1297	delC=0.8703
Northern Sweden	ACPOP	Study-wide	600	(C)₉=0.113	delC=0.887
The Danish reference pan genome	Danish	Study-wide	40	(C)₉=0.07	delC=0.93

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.3837340_3837341del
GRCh38.p14 chr 3	NC_000003.12:g.3837341del
GRCh38.p14 chr 3	NC_000003.12:g.3837341dup
GRCh38.p14 chr 3	NC_000003.12:g.3837340_3837341dup
GRCh38.p14 chr 3	NC_000003.12:g.3837338_3837341dup
GRCh38.p14 chr 3	NC_000003.12:g.3837337_3837341dup
GRCh38.p14 chr 3	NC_000003.12:g.3837336_3837341dup
GRCh37.p13 chr 3	NC_000003.11:g.3879024_3879025del
GRCh37.p13 chr 3	NC_000003.11:g.3879025del
GRCh37.p13 chr 3	NC_000003.11:g.3879025dup
GRCh37.p13 chr 3	NC_000003.11:g.3879024_3879025dup
GRCh37.p13 chr 3	NC_000003.11:g.3879022_3879025dup
GRCh37.p13 chr 3	NC_000003.11:g.3879021_3879025dup
GRCh37.p13 chr 3	NC_000003.11:g.3879020_3879025dup

Gene: LRRN1, leucine rich repeat neuronal 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LRRN1 transcript variant 1	NM_001324188.2:c.-278-702… NM_001324188.2:c.-278-7024_-278-7023del	N/A	Intron Variant
LRRN1 transcript variant 2	NM_001324189.2:c.-278-702… NM_001324189.2:c.-278-7024_-278-7023del	N/A	Intron Variant
LRRN1 transcript variant 3	NM_020873.7:c.-278-7024_-… NM_020873.7:c.-278-7024_-278-7023del	N/A	Intron Variant
LRRN1 transcript variant X1	XM_047448644.1:c.-278-702… XM_047448644.1:c.-278-7024_-278-7023del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₉=	delCC	delC	dupC	dupCC	dup(C)₄	dup(C)₅	dup(C)₆
GRCh38.p14 chr 3	NC_000003.12:g.3837333_3837341=	NC_000003.12:g.3837340_3837341del	NC_000003.12:g.3837341del	NC_000003.12:g.3837341dup	NC_000003.12:g.3837340_3837341dup	NC_000003.12:g.3837338_3837341dup	NC_000003.12:g.3837337_3837341dup	NC_000003.12:g.3837336_3837341dup
GRCh37.p13 chr 3	NC_000003.11:g.3879017_3879025=	NC_000003.11:g.3879024_3879025del	NC_000003.11:g.3879025del	NC_000003.11:g.3879025dup	NC_000003.11:g.3879024_3879025dup	NC_000003.11:g.3879022_3879025dup	NC_000003.11:g.3879021_3879025dup	NC_000003.11:g.3879020_3879025dup
LRRN1 transcript variant 1	NM_001324188.2:c.-278-7031=	NM_001324188.2:c.-278-7024_-278-7023del	NM_001324188.2:c.-278-7023del	NM_001324188.2:c.-278-7023dup	NM_001324188.2:c.-278-7024_-278-7023dup	NM_001324188.2:c.-278-7026_-278-7023dup	NM_001324188.2:c.-278-7027_-278-7023dup	NM_001324188.2:c.-278-7028_-278-7023dup
LRRN1 transcript variant 2	NM_001324189.2:c.-278-7031=	NM_001324189.2:c.-278-7024_-278-7023del	NM_001324189.2:c.-278-7023del	NM_001324189.2:c.-278-7023dup	NM_001324189.2:c.-278-7024_-278-7023dup	NM_001324189.2:c.-278-7026_-278-7023dup	NM_001324189.2:c.-278-7027_-278-7023dup	NM_001324189.2:c.-278-7028_-278-7023dup
LRRN1 transcript	NM_020873.5:c.-278-7031=	NM_020873.5:c.-278-7024_-278-7023del	NM_020873.5:c.-278-7023del	NM_020873.5:c.-278-7023dup	NM_020873.5:c.-278-7024_-278-7023dup	NM_020873.5:c.-278-7026_-278-7023dup	NM_020873.5:c.-278-7027_-278-7023dup	NM_020873.5:c.-278-7028_-278-7023dup
LRRN1 transcript variant 3	NM_020873.7:c.-278-7031=	NM_020873.7:c.-278-7024_-278-7023del	NM_020873.7:c.-278-7023del	NM_020873.7:c.-278-7023dup	NM_020873.7:c.-278-7024_-278-7023dup	NM_020873.7:c.-278-7026_-278-7023dup	NM_020873.7:c.-278-7027_-278-7023dup	NM_020873.7:c.-278-7028_-278-7023dup
LRRN1 transcript variant X1	XM_005265351.1:c.-278-7031=	XM_005265351.1:c.-278-7024_-278-7023del	XM_005265351.1:c.-278-7023del	XM_005265351.1:c.-278-7023dup	XM_005265351.1:c.-278-7024_-278-7023dup	XM_005265351.1:c.-278-7026_-278-7023dup	XM_005265351.1:c.-278-7027_-278-7023dup	XM_005265351.1:c.-278-7028_-278-7023dup
LRRN1 transcript variant X1	XM_047448644.1:c.-278-7031=	XM_047448644.1:c.-278-7024_-278-7023del	XM_047448644.1:c.-278-7023del	XM_047448644.1:c.-278-7023dup	XM_047448644.1:c.-278-7024_-278-7023dup	XM_047448644.1:c.-278-7026_-278-7023dup	XM_047448644.1:c.-278-7027_-278-7023dup	XM_047448644.1:c.-278-7028_-278-7023dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

72 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42104053	Mar 15, 2006 (126)
2	ABI	ss42112723	Mar 15, 2006 (126)
3	HGSV	ss82191765	Sep 08, 2015 (146)
4	HUMANGENOME_JCVI	ss95308730	Feb 06, 2009 (137)
5	BGI	ss104738175	Dec 06, 2013 (138)
6	BGI	ss105503155	Dec 03, 2013 (138)
7	BUSHMAN	ss193654931	Jul 04, 2010 (132)
8	BL	ss255983719	May 09, 2011 (137)
9	GMI	ss287719477	May 09, 2011 (134)
10	GMI	ss288316595	May 04, 2012 (137)
11	GMI	ss288316597	May 04, 2012 (137)
12	PJP	ss295085432	May 09, 2011 (137)
13	1000GENOMES	ss326332973	May 09, 2011 (137)
14	1000GENOMES	ss326355073	May 09, 2011 (137)
15	1000GENOMES	ss326457808	May 09, 2011 (137)
16	LUNTER	ss551202186	Apr 25, 2013 (138)
17	LUNTER	ss551276364	Apr 25, 2013 (138)
18	LUNTER	ss552994211	Apr 25, 2013 (138)
19	TISHKOFF	ss553965273	Apr 25, 2013 (138)
20	TISHKOFF	ss553965276	Apr 25, 2013 (138)
21	TISHKOFF	ss556113267	Apr 25, 2013 (138)
22	BILGI_BIOE	ss666195137	Apr 25, 2013 (138)
23	1000GENOMES	ss1369892388	Aug 21, 2014 (142)
24	1000GENOMES	ss1369892391	Aug 21, 2014 (142)
25	DDI	ss1536339789	Apr 01, 2015 (144)
26	EVA_GENOME_DK	ss1575872214	Apr 01, 2015 (144)
27	EVA_UK10K_TWINSUK	ss1703490828	Apr 01, 2015 (144)
28	EVA_UK10K_ALSPAC	ss1703490831	Apr 01, 2015 (144)
29	HAMMER_LAB	ss1798755731	Sep 08, 2015 (146)
30	JJLAB	ss2030492564	Sep 14, 2016 (149)
31	SYSTEMSBIOZJU	ss2625138961	Nov 08, 2017 (151)
32	SWEGEN	ss2991730727	Nov 08, 2017 (151)
33	MCHAISSO	ss3064034115	Nov 08, 2017 (151)
34	MCHAISSO	ss3064894097	Nov 08, 2017 (151)
35	MCHAISSO	ss3065864085	Nov 08, 2017 (151)
36	BEROUKHIMLAB	ss3644118412	Oct 11, 2018 (152)
37	BIOINF_KMB_FNS_UNIBA	ss3645693263	Oct 11, 2018 (152)
38	URBANLAB	ss3647326574	Oct 11, 2018 (152)
39	EGCUT_WGS	ss3659627398	Jul 13, 2019 (153)
40	EVA_DECODE	ss3708515603	Jul 13, 2019 (153)
41	EVA_DECODE	ss3708515604	Jul 13, 2019 (153)
42	ACPOP	ss3729576984	Jul 13, 2019 (153)
43	PACBIO	ss3784217149	Jul 13, 2019 (153)
44	PACBIO	ss3789748047	Jul 13, 2019 (153)
45	PACBIO	ss3794621759	Jul 13, 2019 (153)
46	KHV_HUMAN_GENOMES	ss3802732587	Jul 13, 2019 (153)
47	KHV_HUMAN_GENOMES	ss3802732588	Jul 13, 2019 (153)
48	EVA	ss3827627896	Apr 25, 2020 (154)
49	EVA	ss3837234935	Apr 25, 2020 (154)
50	EVA	ss3842658449	Apr 25, 2020 (154)
51	GNOMAD	ss4064850436	Apr 26, 2021 (155)
52	GNOMAD	ss4064850437	Apr 26, 2021 (155)
53	GNOMAD	ss4064850438	Apr 26, 2021 (155)
54	GNOMAD	ss4064850439	Apr 26, 2021 (155)
55	GNOMAD	ss4064850440	Apr 26, 2021 (155)
56	GNOMAD	ss4064850441	Apr 26, 2021 (155)
57	TOMMO_GENOMICS	ss5157526068	Apr 26, 2021 (155)
58	TOMMO_GENOMICS	ss5157526069	Apr 26, 2021 (155)
59	TOMMO_GENOMICS	ss5157526070	Apr 26, 2021 (155)
60	TOMMO_GENOMICS	ss5157526071	Apr 26, 2021 (155)
61	1000G_HIGH_COVERAGE	ss5252831476	Oct 12, 2022 (156)
62	1000G_HIGH_COVERAGE	ss5252831477	Oct 12, 2022 (156)
63	1000G_HIGH_COVERAGE	ss5252831479	Oct 12, 2022 (156)
64	HUGCELL_USP	ss5452357826	Oct 12, 2022 (156)
65	HUGCELL_USP	ss5452357827	Oct 12, 2022 (156)
66	TOMMO_GENOMICS	ss5688717596	Oct 12, 2022 (156)
67	TOMMO_GENOMICS	ss5688717597	Oct 12, 2022 (156)
68	TOMMO_GENOMICS	ss5688717598	Oct 12, 2022 (156)
69	TOMMO_GENOMICS	ss5688717599	Oct 12, 2022 (156)
70	EVA	ss5825260361	Oct 12, 2022 (156)
71	EVA	ss5867380653	Oct 12, 2022 (156)
72	EVA	ss5959670778	Oct 12, 2022 (156)
73	1000Genomes	NC_000003.11 - 3879017	Oct 11, 2018 (152)
74	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 3879017	Oct 11, 2018 (152)
75	Genetic variation in the Estonian population	NC_000003.11 - 3879017	Oct 11, 2018 (152)
76	The Danish reference pan genome	NC_000003.11 - 3879017	Apr 25, 2020 (154)
77	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
78	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
79	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
80	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
81	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
82	gnomAD - Genomes Submission ignored due to conflicting rows: Row 97317668 (NC_000003.12:3837332::C 759/139434) Row 97317669 (NC_000003.12:3837332::CC 21/139438) Row 97317670 (NC_000003.12:3837332::CCCC 3/139434)...	-	Apr 26, 2021 (155)
83	Northern Sweden	NC_000003.11 - 3879017	Jul 13, 2019 (153)
84	8.3KJPN Submission ignored due to conflicting rows: Row 15495375 (NC_000003.11:3879016::C 2792/16760) Row 15495376 (NC_000003.11:3879016:C: 12984/16760) Row 15495377 (NC_000003.11:3879016:CC: 15/16760)...	-	Apr 26, 2021 (155)
85	8.3KJPN Submission ignored due to conflicting rows: Row 15495375 (NC_000003.11:3879016::C 2792/16760) Row 15495376 (NC_000003.11:3879016:C: 12984/16760) Row 15495377 (NC_000003.11:3879016:CC: 15/16760)...	-	Apr 26, 2021 (155)
86	8.3KJPN Submission ignored due to conflicting rows: Row 15495375 (NC_000003.11:3879016::C 2792/16760) Row 15495376 (NC_000003.11:3879016:C: 12984/16760) Row 15495377 (NC_000003.11:3879016:CC: 15/16760)...	-	Apr 26, 2021 (155)
87	8.3KJPN Submission ignored due to conflicting rows: Row 15495375 (NC_000003.11:3879016::C 2792/16760) Row 15495376 (NC_000003.11:3879016:C: 12984/16760) Row 15495377 (NC_000003.11:3879016:CC: 15/16760)...	-	Apr 26, 2021 (155)
88	14KJPN Submission ignored due to conflicting rows: Row 22554700 (NC_000003.12:3837332:C: 21866/28258) Row 22554701 (NC_000003.12:3837332::C 4735/28258) Row 22554702 (NC_000003.12:3837332:CC: 17/28258)...	-	Oct 12, 2022 (156)
89	14KJPN Submission ignored due to conflicting rows: Row 22554700 (NC_000003.12:3837332:C: 21866/28258) Row 22554701 (NC_000003.12:3837332::C 4735/28258) Row 22554702 (NC_000003.12:3837332:CC: 17/28258)...	-	Oct 12, 2022 (156)
90	14KJPN Submission ignored due to conflicting rows: Row 22554700 (NC_000003.12:3837332:C: 21866/28258) Row 22554701 (NC_000003.12:3837332::C 4735/28258) Row 22554702 (NC_000003.12:3837332:CC: 17/28258)...	-	Oct 12, 2022 (156)
91	14KJPN Submission ignored due to conflicting rows: Row 22554700 (NC_000003.12:3837332:C: 21866/28258) Row 22554701 (NC_000003.12:3837332::C 4735/28258) Row 22554702 (NC_000003.12:3837332:CC: 17/28258)...	-	Oct 12, 2022 (156)
92	UK 10K study - Twins	NC_000003.11 - 3879017	Oct 11, 2018 (152)
93	ALFA	NC_000003.12 - 3837333	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs60170937	May 11, 2012 (137)
rs72567169	May 11, 2012 (137)
rs72581822	Feb 26, 2009 (130)
rs143007791	May 04, 2012 (137)
rs373714966	May 15, 2013 (138)
rs375220522	May 15, 2013 (138)
rs377478036	May 13, 2013 (138)
rs367654915	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5157526070	NC_000003.11:3879016:CC:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCC	(self)
ss4064850441, ss5688717598	NC_000003.12:3837332:CC:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCC	(self)
ss82191765	NC_000003.9:3854024:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss255983719, ss288316595, ss326332973, ss326355073, ss326457808, ss551202186, ss551276364, ss552994211	NC_000003.10:3854016:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss295085432	NC_000003.10:3854024:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
13688922, 7585469, 5365646, 804364, 2861849, 7585469, ss666195137, ss1369892388, ss1536339789, ss1575872214, ss1703490828, ss1703490831, ss1798755731, ss2030492564, ss2625138961, ss2991730727, ss3644118412, ss3659627398, ss3729576984, ss3784217149, ss3789748047, ss3794621759, ss3827627896, ss3837234935, ss5157526069, ss5825260361, ss5959670778	NC_000003.11:3879016:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss553965273	NC_000003.11:3879022:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss553965276	NC_000003.11:3879024:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss3064034115, ss3064894097, ss3065864085, ss3645693263, ss3647326574, ss3708515604, ss3802732588, ss3842658449, ss4064850440, ss5252831476, ss5452357826, ss5688717596, ss5867380653	NC_000003.12:3837332:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss42112723, ss287719477	NT_022517.18:3819016:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss104738175, ss105503155	NT_022517.18:3819023:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss95308730	NT_022517.18:3819024:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss193654931	NT_022517.19:3827332:C:	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCC	(self)
ss288316597	NC_000003.10:3854025::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss556113267, ss5157526068	NC_000003.11:3879016::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss1369892391	NC_000003.11:3879017::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss4064850436, ss5252831477, ss5452357827, ss5688717597	NC_000003.12:3837332::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss3708515603, ss3802732587	NC_000003.12:3837333::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss42104053	NT_022517.18:3819017::C	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCC	(self)
ss5157526071	NC_000003.11:3879016::CC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCC	(self)
ss4064850437, ss5252831479, ss5688717599	NC_000003.12:3837332::CC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCC	(self)
ss4064850438	NC_000003.12:3837332::CCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCC	(self)
ss4064850439	NC_000003.12:3837332::CCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCCC	(self)
2268959324	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCCCC	NC_000003.12:3837332:CCCCCCCCC:CCC… NC_000003.12:3837332:CCCCCCCCC:CCCCCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35514612

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35514612