Name: rs35467129
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35467129

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:19311055-19311071 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₈ / del(T)₇ / del(T)₆ / del(…
del(T)₈ / del(T)₇ / del(T)₆ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.04821 (651/13504, ALFA)
(T)₁₇=0.5 (4/8, KOREAN)
dupT=0.5 (4/8, KOREAN)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SUGP1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13504	TTTTTTTTTTTTTTTTT=0.94365	TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00733, TTTTTTTTTTTTTTTT=0.00081, TTTTTTTTTTTTTTTTTT=0.04821, TTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTT=0.00000	0.916453	0.011441	0.072106	32
European	Sub	11536	TTTTTTTTTTTTTTTTT=0.93412	TTTTTTTTT=0.00000, TTTTTTTTTT=0.00000, TTTTTTTTTTT=0.00000, TTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTT=0.00858, TTTTTTTTTTTTTTTT=0.00095, TTTTTTTTTTTTTTTTTT=0.05635, TTTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTTT=0.00000	0.902103	0.01343	0.084467	32
African	Sub	1236	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	36	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1200	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTT=0.0000, TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	60	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	40	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	20	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	70	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	272	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	34	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	296	TTTTTTTTTTTTTTTTT=0.997	TTTTTTTTT=0.000, TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.003, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	0.993243	0.0	0.006757	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13504	(T)₁₇=0.94365	del(T)₈=0.00000, del(T)₇=0.00000, del(T)₆=0.00000, delTTT=0.00000, delTT=0.00733, delT=0.00081, dupT=0.04821, dupTT=0.00000, dupTTT=0.00000
Allele Frequency Aggregator	European	Sub	11536	(T)₁₇=0.93412	del(T)₈=0.00000, del(T)₇=0.00000, del(T)₆=0.00000, delTTT=0.00000, delTT=0.00858, delT=0.00095, dupT=0.05635, dupTT=0.00000, dupTTT=0.00000
Allele Frequency Aggregator	African	Sub	1236	(T)₁₇=1.0000	del(T)₈=0.0000, del(T)₇=0.0000, del(T)₆=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	Other	Sub	296	(T)₁₇=0.997	del(T)₈=0.000, del(T)₇=0.000, del(T)₆=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.003, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	272	(T)₁₇=1.000	del(T)₈=0.000, del(T)₇=0.000, del(T)₆=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	70	(T)₁₇=1.00	del(T)₈=0.00, del(T)₇=0.00, del(T)₆=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Asian	Sub	60	(T)₁₇=1.00	del(T)₈=0.00, del(T)₇=0.00, del(T)₆=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	34	(T)₁₇=1.00	del(T)₈=0.00, del(T)₇=0.00, del(T)₆=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
KOREAN population from KRGDB	KOREAN	Study-wide	8	- No frequency provided	dupT=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.19311064_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311065_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311066_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311068_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311069_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311070_19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311071del
GRCh38.p14 chr 19	NC_000019.10:g.19311071dup
GRCh38.p14 chr 19	NC_000019.10:g.19311070_19311071dup
GRCh38.p14 chr 19	NC_000019.10:g.19311069_19311071dup
GRCh37.p13 chr 19	NC_000019.9:g.19421873_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421874_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421875_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421877_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421878_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421879_19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421880del
GRCh37.p13 chr 19	NC_000019.9:g.19421880dup
GRCh37.p13 chr 19	NC_000019.9:g.19421879_19421880dup
GRCh37.p13 chr 19	NC_000019.9:g.19421878_19421880dup

Gene: SUGP1, SURP and G-patch domain containing 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SUGP1 transcript	NM_172231.4:c.207-862_207… NM_172231.4:c.207-862_207-855del	N/A	Intron Variant
SUGP1 transcript variant X1	XM_047439142.1:c.-320-498… XM_047439142.1:c.-320-4986_-320-4979del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₇=	del(T)₈	del(T)₇	del(T)₆	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT
GRCh38.p14 chr 19	NC_000019.10:g.19311055_19311071=	NC_000019.10:g.19311064_19311071del	NC_000019.10:g.19311065_19311071del	NC_000019.10:g.19311066_19311071del	NC_000019.10:g.19311068_19311071del	NC_000019.10:g.19311069_19311071del	NC_000019.10:g.19311070_19311071del	NC_000019.10:g.19311071del	NC_000019.10:g.19311071dup	NC_000019.10:g.19311070_19311071dup	NC_000019.10:g.19311069_19311071dup
GRCh37.p13 chr 19	NC_000019.9:g.19421864_19421880=	NC_000019.9:g.19421873_19421880del	NC_000019.9:g.19421874_19421880del	NC_000019.9:g.19421875_19421880del	NC_000019.9:g.19421877_19421880del	NC_000019.9:g.19421878_19421880del	NC_000019.9:g.19421879_19421880del	NC_000019.9:g.19421880del	NC_000019.9:g.19421880dup	NC_000019.9:g.19421879_19421880dup	NC_000019.9:g.19421878_19421880dup
SUGP1 transcript	NM_172231.3:c.207-855=	NM_172231.3:c.207-862_207-855del	NM_172231.3:c.207-861_207-855del	NM_172231.3:c.207-860_207-855del	NM_172231.3:c.207-858_207-855del	NM_172231.3:c.207-857_207-855del	NM_172231.3:c.207-856_207-855del	NM_172231.3:c.207-855del	NM_172231.3:c.207-855dup	NM_172231.3:c.207-856_207-855dup	NM_172231.3:c.207-857_207-855dup
SUGP1 transcript	NM_172231.4:c.207-855=	NM_172231.4:c.207-862_207-855del	NM_172231.4:c.207-861_207-855del	NM_172231.4:c.207-860_207-855del	NM_172231.4:c.207-858_207-855del	NM_172231.4:c.207-857_207-855del	NM_172231.4:c.207-856_207-855del	NM_172231.4:c.207-855del	NM_172231.4:c.207-855dup	NM_172231.4:c.207-856_207-855dup	NM_172231.4:c.207-857_207-855dup
SUGP1 transcript variant X1	XM_005260002.1:c.-489-855=	XM_005260002.1:c.-489-862_-489-855del	XM_005260002.1:c.-489-861_-489-855del	XM_005260002.1:c.-489-860_-489-855del	XM_005260002.1:c.-489-858_-489-855del	XM_005260002.1:c.-489-857_-489-855del	XM_005260002.1:c.-489-856_-489-855del	XM_005260002.1:c.-489-855del	XM_005260002.1:c.-489-855dup	XM_005260002.1:c.-489-856_-489-855dup	XM_005260002.1:c.-489-857_-489-855dup
SUGP1 transcript variant X2	XM_005260003.1:c.-516-4979=	XM_005260003.1:c.-516-4986_-516-4979del	XM_005260003.1:c.-516-4985_-516-4979del	XM_005260003.1:c.-516-4984_-516-4979del	XM_005260003.1:c.-516-4982_-516-4979del	XM_005260003.1:c.-516-4981_-516-4979del	XM_005260003.1:c.-516-4980_-516-4979del	XM_005260003.1:c.-516-4979del	XM_005260003.1:c.-516-4979dup	XM_005260003.1:c.-516-4980_-516-4979dup	XM_005260003.1:c.-516-4981_-516-4979dup
SUGP1 transcript variant X1	XM_047439142.1:c.-320-4979=	XM_047439142.1:c.-320-4986_-320-4979del	XM_047439142.1:c.-320-4985_-320-4979del	XM_047439142.1:c.-320-4984_-320-4979del	XM_047439142.1:c.-320-4982_-320-4979del	XM_047439142.1:c.-320-4981_-320-4979del	XM_047439142.1:c.-320-4980_-320-4979del	XM_047439142.1:c.-320-4979del	XM_047439142.1:c.-320-4979dup	XM_047439142.1:c.-320-4980_-320-4979dup	XM_047439142.1:c.-320-4981_-320-4979dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

38 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40978974	Mar 15, 2006 (126)
2	HUMANGENOME_JCVI	ss95724111	Oct 12, 2018 (152)
3	SSIP	ss947391348	Aug 21, 2014 (142)
4	SWEGEN	ss3017218561	Nov 17, 2017 (151)
5	MCHAISSO	ss3063910491	Nov 08, 2017 (151)
6	MCHAISSO	ss3064757927	Nov 08, 2017 (151)
7	MCHAISSO	ss3065705206	Nov 08, 2017 (151)
8	PACBIO	ss3788489052	Jul 13, 2019 (153)
9	EVA	ss3835388900	Apr 27, 2020 (154)
10	EVA	ss3841314175	Apr 27, 2020 (154)
11	EVA	ss3846819063	Apr 27, 2020 (154)
12	KRGDB	ss3937923014	Apr 27, 2020 (154)
13	GNOMAD	ss4328844608	Apr 27, 2021 (155)
14	GNOMAD	ss4328844609	Apr 27, 2021 (155)
15	GNOMAD	ss4328844610	Apr 27, 2021 (155)
16	GNOMAD	ss4328844611	Apr 27, 2021 (155)
17	GNOMAD	ss4328844612	Apr 27, 2021 (155)
18	GNOMAD	ss4328844613	Apr 27, 2021 (155)
19	GNOMAD	ss4328844614	Apr 27, 2021 (155)
20	GNOMAD	ss4328844615	Apr 27, 2021 (155)
21	GNOMAD	ss4328844616	Apr 27, 2021 (155)
22	TOPMED	ss5070235057	Apr 27, 2021 (155)
23	TOPMED	ss5070235058	Apr 27, 2021 (155)
24	TOMMO_GENOMICS	ss5227088750	Apr 27, 2021 (155)
25	TOMMO_GENOMICS	ss5227088751	Apr 27, 2021 (155)
26	TOMMO_GENOMICS	ss5227088752	Apr 27, 2021 (155)
27	1000G_HIGH_COVERAGE	ss5306749558	Oct 16, 2022 (156)
28	1000G_HIGH_COVERAGE	ss5306749559	Oct 16, 2022 (156)
29	1000G_HIGH_COVERAGE	ss5306749560	Oct 16, 2022 (156)
30	1000G_HIGH_COVERAGE	ss5306749561	Oct 16, 2022 (156)
31	HUGCELL_USP	ss5499343571	Oct 16, 2022 (156)
32	HUGCELL_USP	ss5499343572	Oct 16, 2022 (156)
33	HUGCELL_USP	ss5499343573	Oct 16, 2022 (156)
34	HUGCELL_USP	ss5499343574	Oct 16, 2022 (156)
35	TOMMO_GENOMICS	ss5785491418	Oct 16, 2022 (156)
36	TOMMO_GENOMICS	ss5785491419	Oct 16, 2022 (156)
37	TOMMO_GENOMICS	ss5785491420	Oct 16, 2022 (156)
38	EVA	ss5852231759	Oct 16, 2022 (156)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 536071200 (NC_000019.10:19311054::T 31422/126536) Row 536071201 (NC_000019.10:19311054::TT 197/126552) Row 536071202 (NC_000019.10:19311054::TTT 13/126556)...	-	Apr 27, 2021 (155)
48	KOREAN population from KRGDB	NC_000019.9 - 19421864	Apr 27, 2020 (154)
49	8.3KJPN Submission ignored due to conflicting rows: Row 85058057 (NC_000019.9:19421863::T 4245/16756) Row 85058058 (NC_000019.9:19421863:T: 26/16756) Row 85058059 (NC_000019.9:19421863::TT 10/16756)	-	Apr 27, 2021 (155)
50	8.3KJPN Submission ignored due to conflicting rows: Row 85058057 (NC_000019.9:19421863::T 4245/16756) Row 85058058 (NC_000019.9:19421863:T: 26/16756) Row 85058059 (NC_000019.9:19421863::TT 10/16756)	-	Apr 27, 2021 (155)
51	8.3KJPN Submission ignored due to conflicting rows: Row 85058057 (NC_000019.9:19421863::T 4245/16756) Row 85058058 (NC_000019.9:19421863:T: 26/16756) Row 85058059 (NC_000019.9:19421863::TT 10/16756)	-	Apr 27, 2021 (155)
52	14KJPN Submission ignored due to conflicting rows: Row 119328522 (NC_000019.10:19311054::T 7271/28254) Row 119328523 (NC_000019.10:19311054:T: 26/28254) Row 119328524 (NC_000019.10:19311054::TT 11/28254)	-	Oct 16, 2022 (156)
53	14KJPN Submission ignored due to conflicting rows: Row 119328522 (NC_000019.10:19311054::T 7271/28254) Row 119328523 (NC_000019.10:19311054:T: 26/28254) Row 119328524 (NC_000019.10:19311054::TT 11/28254)	-	Oct 16, 2022 (156)
54	14KJPN Submission ignored due to conflicting rows: Row 119328522 (NC_000019.10:19311054::T 7271/28254) Row 119328523 (NC_000019.10:19311054:T: 26/28254) Row 119328524 (NC_000019.10:19311054::TT 11/28254)	-	Oct 16, 2022 (156)
55	TopMed Submission ignored due to conflicting rows: Row 285780721 (NC_000019.10:19311054:TTTTTTT: 3/264690) Row 285780722 (NC_000019.10:19311054:TTTTTTTT: 5/264690)	-	Apr 27, 2021 (155)
56	TopMed Submission ignored due to conflicting rows: Row 285780721 (NC_000019.10:19311054:TTTTTTT: 3/264690) Row 285780722 (NC_000019.10:19311054:TTTTTTTT: 5/264690)	-	Apr 27, 2021 (155)
57	ALFA	NC_000019.10 - 19311055	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4328844616, ss5070235058	NC_000019.10:19311054:TTTTTTTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
ss5070235057	NC_000019.10:19311054:TTTTTTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss4328844615	NC_000019.10:19311054:TTTTTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3835388900	NC_000019.9:19421863:TTTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4328844614	NC_000019.10:19311054:TTTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4328844613	NC_000019.10:19311054:TTT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3017218561	NC_000019.9:19421863:TT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4328844612, ss5306749560, ss5499343572	NC_000019.10:19311054:TT:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3788489052, ss5227088751	NC_000019.9:19421863:T:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4328844611, ss5306749561, ss5499343573, ss5785491419	NC_000019.10:19311054:T:	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
45100408, ss3841314175, ss3937923014, ss5227088750	NC_000019.9:19421863::T	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss947391348	NC_000019.9:19421864::T	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3063910491, ss3064757927, ss3065705206, ss3846819063, ss4328844608, ss5306749558, ss5499343571, ss5785491418, ss5852231759	NC_000019.10:19311054::T	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss40978974	NT_011295.11:10684665::T	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss95724111	NT_011295.11:10684682::T	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss5227088752	NC_000019.9:19421863::TT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4328844609, ss5306749559, ss5499343574, ss5785491420	NC_000019.10:19311054::TT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4328844610	NC_000019.10:19311054::TTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
11449598	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000019.10:19311054:TTTTTTTTTTTT… NC_000019.10:19311054:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35467129

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35467129