Name: rs35277322
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs35277322

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:111687209-111687225 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₈ / del(T)₄ / delTTT / delTT…
del(T)₈ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₉
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.2696 (1767/6554, ALFA)
(T)₁₇=0.4099 (2053/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: RAP1A : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6554	TTTTTTTTTTTTTTTTT=0.6868	TTTTTTTTT=0.0002, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0351, TTTTTTTTTTTTTTTT=0.2696, TTTTTTTTTTTTTTTTTT=0.0084, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	0.574284	0.119587	0.306129	32
European	Sub	5428	TTTTTTTTTTTTTTTTT=0.6231	TTTTTTTTT=0.0002, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0424, TTTTTTTTTTTTTTTT=0.3242, TTTTTTTTTTTTTTTTTT=0.0101, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	0.477655	0.145961	0.376384	31
African	Sub	898	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	22	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	876	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	4	TTTTTTTTTTTTTTTTT=1.0	TTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
East Asian	Sub	0	TTTTTTTTTTTTTTTTT=0	TTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other Asian	Sub	4	TTTTTTTTTTTTTTTTT=1.0	TTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	38	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	64	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	16	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	106	TTTTTTTTTTTTTTTTT=0.934	TTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.066, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	0.924528	0.056604	0.018868	21

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	6554	(T)₁₇=0.6868	del(T)₈=0.0002, delTTT=0.0000, delTT=0.0351, delT=0.2696, dupT=0.0084, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	5428	(T)₁₇=0.6231	del(T)₈=0.0002, delTTT=0.0000, delTT=0.0424, delT=0.3242, dupT=0.0101, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	898	(T)₁₇=1.000	del(T)₈=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	106	(T)₁₇=0.934	del(T)₈=0.000, delTTT=0.000, delTT=0.000, delT=0.066, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	64	(T)₁₇=1.00	del(T)₈=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	38	(T)₁₇=1.00	del(T)₈=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	16	(T)₁₇=1.00	del(T)₈=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Asian	Sub	4	(T)₁₇=1.0	del(T)₈=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0
1000Genomes	Global	Study-wide	5008	(T)₁₇=0.4099	delT=0.5901
1000Genomes	African	Sub	1322	(T)₁₇=0.6120	delT=0.3880
1000Genomes	East Asian	Sub	1008	(T)₁₇=0.2679	delT=0.7321
1000Genomes	Europe	Sub	1006	(T)₁₇=0.3787	delT=0.6213
1000Genomes	South Asian	Sub	978	(T)₁₇=0.356	delT=0.644
1000Genomes	American	Sub	694	(T)₁₇=0.353	delT=0.647

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.111687218_111687225del
GRCh38.p14 chr 1	NC_000001.11:g.111687222_111687225del
GRCh38.p14 chr 1	NC_000001.11:g.111687223_111687225del
GRCh38.p14 chr 1	NC_000001.11:g.111687224_111687225del
GRCh38.p14 chr 1	NC_000001.11:g.111687225del
GRCh38.p14 chr 1	NC_000001.11:g.111687225dup
GRCh38.p14 chr 1	NC_000001.11:g.111687224_111687225dup
GRCh38.p14 chr 1	NC_000001.11:g.111687223_111687225dup
GRCh38.p14 chr 1	NC_000001.11:g.111687217_111687225dup
GRCh37.p13 chr 1	NC_000001.10:g.112229840_112229847del
GRCh37.p13 chr 1	NC_000001.10:g.112229844_112229847del
GRCh37.p13 chr 1	NC_000001.10:g.112229845_112229847del
GRCh37.p13 chr 1	NC_000001.10:g.112229846_112229847del
GRCh37.p13 chr 1	NC_000001.10:g.112229847del
GRCh37.p13 chr 1	NC_000001.10:g.112229847dup
GRCh37.p13 chr 1	NC_000001.10:g.112229846_112229847dup
GRCh37.p13 chr 1	NC_000001.10:g.112229845_112229847dup
GRCh37.p13 chr 1	NC_000001.10:g.112229839_112229847dup

Gene: RAP1A, RAP1A, member of RAS oncogene family (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
RAP1A transcript variant 1	NM_001010935.3:c.-27-4116… NM_001010935.3:c.-27-4116_-27-4109del	N/A	Intron Variant
RAP1A transcript variant 3	NM_001291896.3:c.-27-4116… NM_001291896.3:c.-27-4116_-27-4109del	N/A	Intron Variant
RAP1A transcript variant 4	NM_001370216.2:c.-27-4116… NM_001370216.2:c.-27-4116_-27-4109del	N/A	Intron Variant
RAP1A transcript variant 5	NM_001370217.2:c.-27-4116… NM_001370217.2:c.-27-4116_-27-4109del	N/A	Intron Variant
RAP1A transcript variant 6	NM_001394066.1:c.-27-4116… NM_001394066.1:c.-27-4116_-27-4109del	N/A	Intron Variant
RAP1A transcript variant 2	NM_002884.4:c.-27-4116_-2… NM_002884.4:c.-27-4116_-27-4109del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₇=	del(T)₈	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₉
GRCh38.p14 chr 1	NC_000001.11:g.111687209_111687225=	NC_000001.11:g.111687218_111687225del	NC_000001.11:g.111687222_111687225del	NC_000001.11:g.111687223_111687225del	NC_000001.11:g.111687224_111687225del	NC_000001.11:g.111687225del	NC_000001.11:g.111687225dup	NC_000001.11:g.111687224_111687225dup	NC_000001.11:g.111687223_111687225dup	NC_000001.11:g.111687217_111687225dup
GRCh37.p13 chr 1	NC_000001.10:g.112229831_112229847=	NC_000001.10:g.112229840_112229847del	NC_000001.10:g.112229844_112229847del	NC_000001.10:g.112229845_112229847del	NC_000001.10:g.112229846_112229847del	NC_000001.10:g.112229847del	NC_000001.10:g.112229847dup	NC_000001.10:g.112229846_112229847dup	NC_000001.10:g.112229845_112229847dup	NC_000001.10:g.112229839_112229847dup
RAP1A transcript variant 1	NM_001010935.1:c.-27-4125=	NM_001010935.1:c.-27-4116_-27-4109del	NM_001010935.1:c.-27-4112_-27-4109del	NM_001010935.1:c.-27-4111_-27-4109del	NM_001010935.1:c.-27-4110_-27-4109del	NM_001010935.1:c.-27-4109del	NM_001010935.1:c.-27-4109dup	NM_001010935.1:c.-27-4110_-27-4109dup	NM_001010935.1:c.-27-4111_-27-4109dup	NM_001010935.1:c.-27-4117_-27-4109dup
RAP1A transcript variant 1	NM_001010935.3:c.-27-4125=	NM_001010935.3:c.-27-4116_-27-4109del	NM_001010935.3:c.-27-4112_-27-4109del	NM_001010935.3:c.-27-4111_-27-4109del	NM_001010935.3:c.-27-4110_-27-4109del	NM_001010935.3:c.-27-4109del	NM_001010935.3:c.-27-4109dup	NM_001010935.3:c.-27-4110_-27-4109dup	NM_001010935.3:c.-27-4111_-27-4109dup	NM_001010935.3:c.-27-4117_-27-4109dup
RAP1A transcript variant 3	NM_001291896.3:c.-27-4125=	NM_001291896.3:c.-27-4116_-27-4109del	NM_001291896.3:c.-27-4112_-27-4109del	NM_001291896.3:c.-27-4111_-27-4109del	NM_001291896.3:c.-27-4110_-27-4109del	NM_001291896.3:c.-27-4109del	NM_001291896.3:c.-27-4109dup	NM_001291896.3:c.-27-4110_-27-4109dup	NM_001291896.3:c.-27-4111_-27-4109dup	NM_001291896.3:c.-27-4117_-27-4109dup
RAP1A transcript variant 4	NM_001370216.2:c.-27-4125=	NM_001370216.2:c.-27-4116_-27-4109del	NM_001370216.2:c.-27-4112_-27-4109del	NM_001370216.2:c.-27-4111_-27-4109del	NM_001370216.2:c.-27-4110_-27-4109del	NM_001370216.2:c.-27-4109del	NM_001370216.2:c.-27-4109dup	NM_001370216.2:c.-27-4110_-27-4109dup	NM_001370216.2:c.-27-4111_-27-4109dup	NM_001370216.2:c.-27-4117_-27-4109dup
RAP1A transcript variant 5	NM_001370217.2:c.-27-4125=	NM_001370217.2:c.-27-4116_-27-4109del	NM_001370217.2:c.-27-4112_-27-4109del	NM_001370217.2:c.-27-4111_-27-4109del	NM_001370217.2:c.-27-4110_-27-4109del	NM_001370217.2:c.-27-4109del	NM_001370217.2:c.-27-4109dup	NM_001370217.2:c.-27-4110_-27-4109dup	NM_001370217.2:c.-27-4111_-27-4109dup	NM_001370217.2:c.-27-4117_-27-4109dup
RAP1A transcript variant 6	NM_001394066.1:c.-27-4125=	NM_001394066.1:c.-27-4116_-27-4109del	NM_001394066.1:c.-27-4112_-27-4109del	NM_001394066.1:c.-27-4111_-27-4109del	NM_001394066.1:c.-27-4110_-27-4109del	NM_001394066.1:c.-27-4109del	NM_001394066.1:c.-27-4109dup	NM_001394066.1:c.-27-4110_-27-4109dup	NM_001394066.1:c.-27-4111_-27-4109dup	NM_001394066.1:c.-27-4117_-27-4109dup
RAP1A transcript variant 2	NM_002884.2:c.-27-4125=	NM_002884.2:c.-27-4116_-27-4109del	NM_002884.2:c.-27-4112_-27-4109del	NM_002884.2:c.-27-4111_-27-4109del	NM_002884.2:c.-27-4110_-27-4109del	NM_002884.2:c.-27-4109del	NM_002884.2:c.-27-4109dup	NM_002884.2:c.-27-4110_-27-4109dup	NM_002884.2:c.-27-4111_-27-4109dup	NM_002884.2:c.-27-4117_-27-4109dup
RAP1A transcript variant 2	NM_002884.4:c.-27-4125=	NM_002884.4:c.-27-4116_-27-4109del	NM_002884.4:c.-27-4112_-27-4109del	NM_002884.4:c.-27-4111_-27-4109del	NM_002884.4:c.-27-4110_-27-4109del	NM_002884.4:c.-27-4109del	NM_002884.4:c.-27-4109dup	NM_002884.4:c.-27-4110_-27-4109dup	NM_002884.4:c.-27-4111_-27-4109dup	NM_002884.4:c.-27-4117_-27-4109dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

47 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41128388	Oct 11, 2018 (152)
2	ABI	ss41326855	Mar 14, 2006 (126)
3	BUSHMAN	ss193121870	Jul 04, 2010 (132)
4	GMI	ss288027336	May 04, 2012 (137)
5	SSMP	ss663110226	Apr 01, 2015 (144)
6	BILGI_BIOE	ss666106367	Apr 25, 2013 (138)
7	SSIP	ss947028272	Aug 21, 2014 (142)
8	1000GENOMES	ss1367817214	Aug 21, 2014 (142)
9	HAMMER_LAB	ss1794936411	Sep 08, 2015 (146)
10	SWEGEN	ss2987443454	Nov 08, 2017 (151)
11	URBANLAB	ss3646753131	Oct 11, 2018 (152)
12	EVA_DECODE	ss3687536484	Jul 12, 2019 (153)
13	EVA_DECODE	ss3687536485	Jul 12, 2019 (153)
14	EVA_DECODE	ss3687536487	Jul 12, 2019 (153)
15	EVA_DECODE	ss3687536488	Jul 12, 2019 (153)
16	ACPOP	ss3727391782	Jul 12, 2019 (153)
17	ACPOP	ss3727391783	Jul 12, 2019 (153)
18	PACBIO	ss3783520552	Jul 12, 2019 (153)
19	PACBIO	ss3789162242	Jul 12, 2019 (153)
20	PACBIO	ss3794035166	Jul 12, 2019 (153)
21	KHV_HUMAN_GENOMES	ss3799679530	Jul 12, 2019 (153)
22	EVA	ss3826371463	Apr 25, 2020 (154)
23	EVA	ss3836577296	Apr 25, 2020 (154)
24	EVA	ss3841985682	Apr 25, 2020 (154)
25	GNOMAD	ss4000490429	Apr 25, 2021 (155)
26	GNOMAD	ss4000490430	Apr 25, 2021 (155)
27	GNOMAD	ss4000490431	Apr 25, 2021 (155)
28	GNOMAD	ss4000490434	Apr 25, 2021 (155)
29	GNOMAD	ss4000490435	Apr 25, 2021 (155)
30	GNOMAD	ss4000490436	Apr 25, 2021 (155)
31	GNOMAD	ss4000490437	Apr 25, 2021 (155)
32	GNOMAD	ss4000490438	Apr 25, 2021 (155)
33	TOMMO_GENOMICS	ss5145693572	Apr 25, 2021 (155)
34	TOMMO_GENOMICS	ss5145693573	Apr 25, 2021 (155)
35	TOMMO_GENOMICS	ss5145693574	Apr 25, 2021 (155)
36	TOMMO_GENOMICS	ss5145693575	Apr 25, 2021 (155)
37	1000G_HIGH_COVERAGE	ss5243619369	Oct 12, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5243619370	Oct 12, 2022 (156)
39	1000G_HIGH_COVERAGE	ss5243619371	Oct 12, 2022 (156)
40	HUGCELL_USP	ss5444542349	Oct 12, 2022 (156)
41	HUGCELL_USP	ss5444542350	Oct 12, 2022 (156)
42	HUGCELL_USP	ss5444542351	Oct 12, 2022 (156)
43	HUGCELL_USP	ss5444542353	Oct 12, 2022 (156)
44	TOMMO_GENOMICS	ss5670964884	Oct 12, 2022 (156)
45	TOMMO_GENOMICS	ss5670964885	Oct 12, 2022 (156)
46	TOMMO_GENOMICS	ss5670964886	Oct 12, 2022 (156)
47	TOMMO_GENOMICS	ss5670964887	Oct 12, 2022 (156)
48	1000Genomes	NC_000001.10 - 112229831	Oct 11, 2018 (152)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 22776877 (NC_000001.11:111687208::T 4943/120544) Row 22776878 (NC_000001.11:111687208::TT 811/120588) Row 22776879 (NC_000001.11:111687208::TTT 10/120592)...	-	Apr 25, 2021 (155)
57	Northern Sweden Submission ignored due to conflicting rows: Row 676647 (NC_000001.10:112229830:T: 225/594) Row 676648 (NC_000001.10:112229830:TT: 29/594)	-	Jul 12, 2019 (153)
58	Northern Sweden Submission ignored due to conflicting rows: Row 676647 (NC_000001.10:112229830:T: 225/594) Row 676648 (NC_000001.10:112229830:TT: 29/594)	-	Jul 12, 2019 (153)
59	8.3KJPN Submission ignored due to conflicting rows: Row 3662879 (NC_000001.10:112229830:T: 11853/16756) Row 3662880 (NC_000001.10:112229830:TT: 1228/16756) Row 3662881 (NC_000001.10:112229830::T 1530/16756)...	-	Apr 25, 2021 (155)
60	8.3KJPN Submission ignored due to conflicting rows: Row 3662879 (NC_000001.10:112229830:T: 11853/16756) Row 3662880 (NC_000001.10:112229830:TT: 1228/16756) Row 3662881 (NC_000001.10:112229830::T 1530/16756)...	-	Apr 25, 2021 (155)
61	8.3KJPN Submission ignored due to conflicting rows: Row 3662879 (NC_000001.10:112229830:T: 11853/16756) Row 3662880 (NC_000001.10:112229830:TT: 1228/16756) Row 3662881 (NC_000001.10:112229830::T 1530/16756)...	-	Apr 25, 2021 (155)
62	8.3KJPN Submission ignored due to conflicting rows: Row 3662879 (NC_000001.10:112229830:T: 11853/16756) Row 3662880 (NC_000001.10:112229830:TT: 1228/16756) Row 3662881 (NC_000001.10:112229830::T 1530/16756)...	-	Apr 25, 2021 (155)
63	14KJPN Submission ignored due to conflicting rows: Row 4801988 (NC_000001.11:111687208:T: 18997/27304) Row 4801989 (NC_000001.11:111687208::T 2227/27304) Row 4801990 (NC_000001.11:111687208:TT: 1926/27304)...	-	Oct 12, 2022 (156)
64	14KJPN Submission ignored due to conflicting rows: Row 4801988 (NC_000001.11:111687208:T: 18997/27304) Row 4801989 (NC_000001.11:111687208::T 2227/27304) Row 4801990 (NC_000001.11:111687208:TT: 1926/27304)...	-	Oct 12, 2022 (156)
65	14KJPN Submission ignored due to conflicting rows: Row 4801988 (NC_000001.11:111687208:T: 18997/27304) Row 4801989 (NC_000001.11:111687208::T 2227/27304) Row 4801990 (NC_000001.11:111687208:TT: 1926/27304)...	-	Oct 12, 2022 (156)
66	14KJPN Submission ignored due to conflicting rows: Row 4801988 (NC_000001.11:111687208:T: 18997/27304) Row 4801989 (NC_000001.11:111687208::T 2227/27304) Row 4801990 (NC_000001.11:111687208:TT: 1926/27304)...	-	Oct 12, 2022 (156)
67	ALFA	NC_000001.11 - 111687209	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2987443454	NC_000001.10:112229830:TTTTTTTT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
ss4000490438	NC_000001.11:111687208:TTTTTTTT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTT	(self)
ss4000490437	NC_000001.11:111687208:TTTT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss4000490436	NC_000001.11:111687208:TTT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss666106367, ss3727391783, ss3836577296, ss5145693573	NC_000001.10:112229830:TT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3687536484, ss3841985682, ss4000490435, ss5243619370, ss5444542351, ss5670964886	NC_000001.11:111687208:TT:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss288027336	NC_000001.9:112031353:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
3221301, ss663110226, ss1367817214, ss1794936411, ss3727391782, ss3783520552, ss3789162242, ss3794035166, ss5145693572	NC_000001.10:112229830:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss947028272	NC_000001.10:112229831:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3646753131, ss3799679530, ss4000490434, ss5243619369, ss5444542350, ss5670964884	NC_000001.11:111687208:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3687536485	NC_000001.11:111687209:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss41326855	NT_032977.9:82201748:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss193121870	NT_032977.10:111101220:T:	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3826371463, ss5145693574	NC_000001.10:112229830::T	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4000490429, ss5243619371, ss5444542349, ss5670964885	NC_000001.11:111687208::T	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3687536487	NC_000001.11:111687210::T	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss41128388	NT_032977.9:82201748::T	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss5145693575	NC_000001.10:112229830::TT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4000490430, ss5444542353, ss5670964887	NC_000001.11:111687208::TT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4000490431	NC_000001.11:111687208::TTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
2020952270	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss3687536488	NC_000001.11:111687210::TTTTTTTTT	NC_000001.11:111687208:TTTTTTTTTTT… NC_000001.11:111687208:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs35277322

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs35277322