Name: rs34983908
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34983908

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:142323867-142323876 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₅ / del(T)₄ / delTTT / delTT…
del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.08955 (1323/14774, ALFA)
delT=0.2208 (851/3854, ALSPAC)
delT=0.2182 (809/3708, TWINSUK) (+ 3 more)
(T)₁₀=0.026 (19/742, 1000G)
delT=0.162 (97/600, NorthernSweden)
delT=0.20 (8/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: XRN1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	14774	TTTTTTTTTT=0.91045	TTTTT=0.00000, TTTTTT=0.00000, TTTTTTTT=0.00000, TTTTTTTTT=0.08955, TTTTTTTTTTT=0.00000	0.838229	0.017328	0.144443	32
European	Sub	11300	TTTTTTTTTT=0.88407	TTTTT=0.00000, TTTTTT=0.00000, TTTTTTTT=0.00000, TTTTTTTTT=0.11593, TTTTTTTTTTT=0.00000	0.790619	0.022478	0.186903	24
African	Sub	2496	TTTTTTTTTT=0.9984	TTTTT=0.0000, TTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0016, TTTTTTTTTTT=0.0000	0.996795	0.0	0.003205	0
African Others	Sub	106	TTTTTTTTTT=1.000	TTTTT=0.000, TTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African American	Sub	2390	TTTTTTTTTT=0.9983	TTTTT=0.0000, TTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0017, TTTTTTTTTTT=0.0000	0.996653	0.0	0.003347	0
Asian	Sub	86	TTTTTTTTTT=0.99	TTTTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.01, TTTTTTTTTTT=0.00	0.976744	0.0	0.023256	0
East Asian	Sub	62	TTTTTTTTTT=1.00	TTTTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	TTTTTTTTTT=0.96	TTTTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.04, TTTTTTTTTTT=0.00	0.916667	0.0	0.083333	0
Latin American 1	Sub	86	TTTTTTTTTT=1.00	TTTTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00, TTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	378	TTTTTTTTTT=1.000	TTTTT=0.000, TTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000, TTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	72	TTTTTTTTTT=0.99	TTTTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.01, TTTTTTTTTTT=0.00	0.972222	0.0	0.027778	0
Other	Sub	356	TTTTTTTTTT=0.980	TTTTT=0.000, TTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.020, TTTTTTTTTTT=0.000	0.966292	0.005618	0.02809	8

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	14774	(T)₁₀=0.91045	del(T)₅=0.00000, del(T)₄=0.00000, delTT=0.00000, delT=0.08955, dupT=0.00000
Allele Frequency Aggregator	European	Sub	11300	(T)₁₀=0.88407	del(T)₅=0.00000, del(T)₄=0.00000, delTT=0.00000, delT=0.11593, dupT=0.00000
Allele Frequency Aggregator	African	Sub	2496	(T)₁₀=0.9984	del(T)₅=0.0000, del(T)₄=0.0000, delTT=0.0000, delT=0.0016, dupT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	378	(T)₁₀=1.000	del(T)₅=0.000, del(T)₄=0.000, delTT=0.000, delT=0.000, dupT=0.000
Allele Frequency Aggregator	Other	Sub	356	(T)₁₀=0.980	del(T)₅=0.000, del(T)₄=0.000, delTT=0.000, delT=0.020, dupT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	86	(T)₁₀=1.00	del(T)₅=0.00, del(T)₄=0.00, delTT=0.00, delT=0.00, dupT=0.00
Allele Frequency Aggregator	Asian	Sub	86	(T)₁₀=0.99	del(T)₅=0.00, del(T)₄=0.00, delTT=0.00, delT=0.01, dupT=0.00
Allele Frequency Aggregator	South Asian	Sub	72	(T)₁₀=0.99	del(T)₅=0.00, del(T)₄=0.00, delTT=0.00, delT=0.01, dupT=0.00
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(T)₁₀=0.7792	delT=0.2208
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(T)₁₀=0.7818	delT=0.2182
1000Genomes	Global	Study-wide	742	(T)₁₀=0.026	delT=0.974
1000Genomes	Europe	Sub	201	(T)₁₀=0.000	delT=1.000
1000Genomes	East Asian	Sub	159	(T)₁₀=0.000	delT=1.000
1000Genomes	American	Sub	143	(T)₁₀=0.007	delT=0.993
1000Genomes	South Asian	Sub	141	(T)₁₀=0.000	delT=1.000
1000Genomes	African	Sub	98	(T)₁₀=0.18	delT=0.82
Northern Sweden	ACPOP	Study-wide	600	(T)₁₀=0.838	delT=0.162
The Danish reference pan genome	Danish	Study-wide	40	(T)₁₀=0.80	delT=0.20

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.142323872_142323876del
GRCh38.p14 chr 3	NC_000003.12:g.142323873_142323876del
GRCh38.p14 chr 3	NC_000003.12:g.142323874_142323876del
GRCh38.p14 chr 3	NC_000003.12:g.142323875_142323876del
GRCh38.p14 chr 3	NC_000003.12:g.142323876del
GRCh38.p14 chr 3	NC_000003.12:g.142323876dup
GRCh37.p13 chr 3	NC_000003.11:g.142042714_142042718del
GRCh37.p13 chr 3	NC_000003.11:g.142042715_142042718del
GRCh37.p13 chr 3	NC_000003.11:g.142042716_142042718del
GRCh37.p13 chr 3	NC_000003.11:g.142042717_142042718del
GRCh37.p13 chr 3	NC_000003.11:g.142042718del
GRCh37.p13 chr 3	NC_000003.11:g.142042718dup

Gene: XRN1, 5'-3' exoribonuclease 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
XRN1 transcript variant 3	NM_001282857.2:c.4405-496… NM_001282857.2:c.4405-4968_4405-4964del	N/A	Intron Variant
XRN1 transcript variant 1	NM_019001.5:c.4402-4968_4… NM_019001.5:c.4402-4968_4402-4964del	N/A	Intron Variant
XRN1 transcript variant 4	NM_001282859.2:c.	N/A	Genic Downstream Transcript Variant
XRN1 transcript variant X1	XM_011512919.3:c.4405-496… XM_011512919.3:c.4405-4968_4405-4964del	N/A	Intron Variant
XRN1 transcript variant X3	XM_011512920.3:c.4405-517… XM_011512920.3:c.4405-5177_4405-5173del	N/A	Intron Variant
XRN1 transcript variant X2	XM_017006640.2:c.4402-496… XM_017006640.2:c.4402-4968_4402-4964del	N/A	Intron Variant
XRN1 transcript variant X5	XM_017006641.2:c.4405-517… XM_017006641.2:c.4405-5177_4405-5173del	N/A	Intron Variant
XRN1 transcript variant X4	XM_047448356.1:c.4402-517… XM_047448356.1:c.4402-5177_4402-5173del	N/A	Intron Variant
XRN1 transcript variant X6	XM_047448357.1:c.4402-517… XM_047448357.1:c.4402-5177_4402-5173del	N/A	Intron Variant
XRN1 transcript variant X7	XM_047448358.1:c.3775-496… XM_047448358.1:c.3775-4968_3775-4964del	N/A	Intron Variant
XRN1 transcript variant X10	XM_006713673.3:c.	N/A	Genic Downstream Transcript Variant
XRN1 transcript variant X9	XM_017006642.2:c.	N/A	Genic Downstream Transcript Variant
XRN1 transcript variant X8	XM_047448359.1:c.	N/A	Genic Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₀=	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT
GRCh38.p14 chr 3	NC_000003.12:g.142323867_142323876=	NC_000003.12:g.142323872_142323876del	NC_000003.12:g.142323873_142323876del	NC_000003.12:g.142323874_142323876del	NC_000003.12:g.142323875_142323876del	NC_000003.12:g.142323876del	NC_000003.12:g.142323876dup
GRCh37.p13 chr 3	NC_000003.11:g.142042709_142042718=	NC_000003.11:g.142042714_142042718del	NC_000003.11:g.142042715_142042718del	NC_000003.11:g.142042716_142042718del	NC_000003.11:g.142042717_142042718del	NC_000003.11:g.142042718del	NC_000003.11:g.142042718dup
XRN1 transcript variant 2	NM_001042604.1:c.4402-4964=	NM_001042604.1:c.4402-4968_4402-4964del	NM_001042604.1:c.4402-4967_4402-4964del	NM_001042604.1:c.4402-4966_4402-4964del	NM_001042604.1:c.4402-4965_4402-4964del	NM_001042604.1:c.4402-4964del	NM_001042604.1:c.4402-4964dup
XRN1 transcript variant 3	NM_001282857.2:c.4405-4964=	NM_001282857.2:c.4405-4968_4405-4964del	NM_001282857.2:c.4405-4967_4405-4964del	NM_001282857.2:c.4405-4966_4405-4964del	NM_001282857.2:c.4405-4965_4405-4964del	NM_001282857.2:c.4405-4964del	NM_001282857.2:c.4405-4964dup
XRN1 transcript variant 1	NM_019001.3:c.4402-4964=	NM_019001.3:c.4402-4968_4402-4964del	NM_019001.3:c.4402-4967_4402-4964del	NM_019001.3:c.4402-4966_4402-4964del	NM_019001.3:c.4402-4965_4402-4964del	NM_019001.3:c.4402-4964del	NM_019001.3:c.4402-4964dup
XRN1 transcript variant 1	NM_019001.5:c.4402-4964=	NM_019001.5:c.4402-4968_4402-4964del	NM_019001.5:c.4402-4967_4402-4964del	NM_019001.5:c.4402-4966_4402-4964del	NM_019001.5:c.4402-4965_4402-4964del	NM_019001.5:c.4402-4964del	NM_019001.5:c.4402-4964dup
XRN1 transcript variant X1	XM_005247542.1:c.4405-4964=	XM_005247542.1:c.4405-4968_4405-4964del	XM_005247542.1:c.4405-4967_4405-4964del	XM_005247542.1:c.4405-4966_4405-4964del	XM_005247542.1:c.4405-4965_4405-4964del	XM_005247542.1:c.4405-4964del	XM_005247542.1:c.4405-4964dup
XRN1 transcript variant X2	XM_005247543.1:c.4402-4964=	XM_005247543.1:c.4402-4968_4402-4964del	XM_005247543.1:c.4402-4967_4402-4964del	XM_005247543.1:c.4402-4966_4402-4964del	XM_005247543.1:c.4402-4965_4402-4964del	XM_005247543.1:c.4402-4964del	XM_005247543.1:c.4402-4964dup
XRN1 transcript variant X3	XM_005247544.1:c.3775-4964=	XM_005247544.1:c.3775-4968_3775-4964del	XM_005247544.1:c.3775-4967_3775-4964del	XM_005247544.1:c.3775-4966_3775-4964del	XM_005247544.1:c.3775-4965_3775-4964del	XM_005247544.1:c.3775-4964del	XM_005247544.1:c.3775-4964dup
XRN1 transcript variant X1	XM_011512919.3:c.4405-4964=	XM_011512919.3:c.4405-4968_4405-4964del	XM_011512919.3:c.4405-4967_4405-4964del	XM_011512919.3:c.4405-4966_4405-4964del	XM_011512919.3:c.4405-4965_4405-4964del	XM_011512919.3:c.4405-4964del	XM_011512919.3:c.4405-4964dup
XRN1 transcript variant X3	XM_011512920.3:c.4405-5173=	XM_011512920.3:c.4405-5177_4405-5173del	XM_011512920.3:c.4405-5176_4405-5173del	XM_011512920.3:c.4405-5175_4405-5173del	XM_011512920.3:c.4405-5174_4405-5173del	XM_011512920.3:c.4405-5173del	XM_011512920.3:c.4405-5173dup
XRN1 transcript variant X2	XM_017006640.2:c.4402-4964=	XM_017006640.2:c.4402-4968_4402-4964del	XM_017006640.2:c.4402-4967_4402-4964del	XM_017006640.2:c.4402-4966_4402-4964del	XM_017006640.2:c.4402-4965_4402-4964del	XM_017006640.2:c.4402-4964del	XM_017006640.2:c.4402-4964dup
XRN1 transcript variant X5	XM_017006641.2:c.4405-5173=	XM_017006641.2:c.4405-5177_4405-5173del	XM_017006641.2:c.4405-5176_4405-5173del	XM_017006641.2:c.4405-5175_4405-5173del	XM_017006641.2:c.4405-5174_4405-5173del	XM_017006641.2:c.4405-5173del	XM_017006641.2:c.4405-5173dup
XRN1 transcript variant X4	XM_047448356.1:c.4402-5173=	XM_047448356.1:c.4402-5177_4402-5173del	XM_047448356.1:c.4402-5176_4402-5173del	XM_047448356.1:c.4402-5175_4402-5173del	XM_047448356.1:c.4402-5174_4402-5173del	XM_047448356.1:c.4402-5173del	XM_047448356.1:c.4402-5173dup
XRN1 transcript variant X6	XM_047448357.1:c.4402-5173=	XM_047448357.1:c.4402-5177_4402-5173del	XM_047448357.1:c.4402-5176_4402-5173del	XM_047448357.1:c.4402-5175_4402-5173del	XM_047448357.1:c.4402-5174_4402-5173del	XM_047448357.1:c.4402-5173del	XM_047448357.1:c.4402-5173dup
XRN1 transcript variant X7	XM_047448358.1:c.3775-4964=	XM_047448358.1:c.3775-4968_3775-4964del	XM_047448358.1:c.3775-4967_3775-4964del	XM_047448358.1:c.3775-4966_3775-4964del	XM_047448358.1:c.3775-4965_3775-4964del	XM_047448358.1:c.3775-4964del	XM_047448358.1:c.3775-4964dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

41 SubSNP, 18 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42105870	Dec 03, 2013 (138)
2	GMI	ss288425187	May 04, 2012 (137)
3	PJP	ss295129596	May 09, 2011 (137)
4	1000GENOMES	ss326432900	May 09, 2011 (137)
5	1000GENOMES	ss326457021	May 09, 2011 (137)
6	LUNTER	ss551286787	Apr 25, 2013 (138)
7	SSMP	ss663361647	Apr 01, 2015 (144)
8	EVA-GONL	ss979240010	Aug 21, 2014 (142)
9	1000GENOMES	ss1371079756	Aug 21, 2014 (142)
10	EVA_GENOME_DK	ss1576049734	Apr 01, 2015 (144)
11	EVA_UK10K_ALSPAC	ss1703853932	Apr 01, 2015 (144)
12	EVA_UK10K_TWINSUK	ss1703853974	Apr 01, 2015 (144)
13	JJLAB	ss2030548104	Sep 14, 2016 (149)
14	SYSTEMSBIOZJU	ss2625402809	Nov 08, 2017 (151)
15	SWEGEN	ss2993321096	Nov 08, 2017 (151)
16	BIOINF_KMB_FNS_UNIBA	ss3645747254	Oct 12, 2018 (152)
17	URBANLAB	ss3647543306	Oct 12, 2018 (152)
18	EVA_DECODE	ss3710438787	Jul 13, 2019 (153)
19	EVA_DECODE	ss3710438788	Jul 13, 2019 (153)
20	ACPOP	ss3730415742	Jul 13, 2019 (153)
21	EVA	ss3828112579	Apr 25, 2020 (154)
22	KOGIC	ss3952565977	Apr 25, 2020 (154)
23	KOGIC	ss3952565978	Apr 25, 2020 (154)
24	GNOMAD	ss4082152792	Apr 27, 2021 (155)
25	GNOMAD	ss4082152794	Apr 27, 2021 (155)
26	GNOMAD	ss4082152795	Apr 27, 2021 (155)
27	GNOMAD	ss4082152796	Apr 27, 2021 (155)
28	TOPMED	ss4586328414	Apr 27, 2021 (155)
29	TOPMED	ss4586328415	Apr 27, 2021 (155)
30	TOMMO_GENOMICS	ss5161936226	Apr 27, 2021 (155)
31	TOMMO_GENOMICS	ss5161936227	Apr 27, 2021 (155)
32	1000G_HIGH_COVERAGE	ss5256295768	Oct 12, 2022 (156)
33	HUGCELL_USP	ss5455406760	Oct 12, 2022 (156)
34	HUGCELL_USP	ss5455406762	Oct 12, 2022 (156)
35	TOMMO_GENOMICS	ss5694918443	Oct 12, 2022 (156)
36	TOMMO_GENOMICS	ss5694918444	Oct 12, 2022 (156)
37	YY_MCH	ss5804313089	Oct 12, 2022 (156)
38	EVA	ss5826583188	Oct 12, 2022 (156)
39	EVA	ss5853869834	Oct 12, 2022 (156)
40	EVA	ss5871312517	Oct 12, 2022 (156)
41	EVA	ss5961697583	Oct 12, 2022 (156)
42	1000Genomes	NC_000003.11 - 142042709	Oct 12, 2018 (152)
43	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 142042709	Oct 12, 2018 (152)
44	The Danish reference pan genome	NC_000003.11 - 142042709	Apr 25, 2020 (154)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 126064167 (NC_000003.12:142323866::T 32/137450) Row 126064169 (NC_000003.12:142323866:T: 23445/137352) Row 126064170 (NC_000003.12:142323866:TT: 4/137456)...	-	Apr 27, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 126064167 (NC_000003.12:142323866::T 32/137450) Row 126064169 (NC_000003.12:142323866:T: 23445/137352) Row 126064170 (NC_000003.12:142323866:TT: 4/137456)...	-	Apr 27, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 126064167 (NC_000003.12:142323866::T 32/137450) Row 126064169 (NC_000003.12:142323866:T: 23445/137352) Row 126064170 (NC_000003.12:142323866:TT: 4/137456)...	-	Apr 27, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 126064167 (NC_000003.12:142323866::T 32/137450) Row 126064169 (NC_000003.12:142323866:T: 23445/137352) Row 126064170 (NC_000003.12:142323866:TT: 4/137456)...	-	Apr 27, 2021 (155)
49	Korean Genome Project Submission ignored due to conflicting rows: Row 8943978 (NC_000003.12:142323866:T: 332/1830) Row 8943979 (NC_000003.12:142323867::T 6/1830)	-	Apr 25, 2020 (154)
50	Korean Genome Project Submission ignored due to conflicting rows: Row 8943978 (NC_000003.12:142323866:T: 332/1830) Row 8943979 (NC_000003.12:142323867::T 6/1830)	-	Apr 25, 2020 (154)
51	Northern Sweden	NC_000003.11 - 142042709	Jul 13, 2019 (153)
52	8.3KJPN Submission ignored due to conflicting rows: Row 19905533 (NC_000003.11:142042708:T: 2781/16760) Row 19905534 (NC_000003.11:142042708::T 6/16760)	-	Apr 27, 2021 (155)
53	8.3KJPN Submission ignored due to conflicting rows: Row 19905533 (NC_000003.11:142042708:T: 2781/16760) Row 19905534 (NC_000003.11:142042708::T 6/16760)	-	Apr 27, 2021 (155)
54	14KJPN Submission ignored due to conflicting rows: Row 28755547 (NC_000003.12:142323866:T: 4650/28258) Row 28755548 (NC_000003.12:142323866::T 15/28258)	-	Oct 12, 2022 (156)
55	14KJPN Submission ignored due to conflicting rows: Row 28755547 (NC_000003.12:142323866:T: 4650/28258) Row 28755548 (NC_000003.12:142323866::T 15/28258)	-	Oct 12, 2022 (156)
56	TopMed Submission ignored due to conflicting rows: Row 423705969 (NC_000003.12:142323866:T: 43861/264690) Row 423705970 (NC_000003.12:142323866:TTTTT: 1/264690)	-	Apr 27, 2021 (155)
57	TopMed Submission ignored due to conflicting rows: Row 423705969 (NC_000003.12:142323866:T: 43861/264690) Row 423705970 (NC_000003.12:142323866:TTTTT: 1/264690)	-	Apr 27, 2021 (155)
58	UK 10K study - Twins	NC_000003.11 - 142042709	Oct 12, 2018 (152)
59	ALFA	NC_000003.12 - 142323867	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs140282996	May 11, 2012 (137)
rs145150294	Sep 17, 2011 (135)
rs370168118	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4586328415	NC_000003.12:142323866:TTTTT:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTT	(self)
6324141231	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTT	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTT	(self)
6324141231	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTT	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTT	(self)
ss4082152796	NC_000003.12:142323866:TTT:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTT	(self)
ss4082152795	NC_000003.12:142323866:TT:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTT	(self)
6324141231	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTT	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTT	(self)
ss288425187, ss295129596, ss326432900, ss326457021, ss551286787	NC_000003.10:143525398:T:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	(self)
17741385, 9880819, 860576, 3700607, 9880819, ss663361647, ss979240010, ss1371079756, ss1576049734, ss1703853932, ss1703853974, ss2030548104, ss2625402809, ss2993321096, ss3730415742, ss3828112579, ss5161936226, ss5826583188, ss5961697583	NC_000003.11:142042708:T:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	(self)
ss3645747254, ss3647543306, ss3710438787, ss3952565977, ss4082152794, ss4586328414, ss5256295768, ss5455406760, ss5694918443, ss5804313089, ss5853869834, ss5871312517	NC_000003.12:142323866:T:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	(self)
6324141231	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	(self)
ss42105870	NT_005612.16:48537863:T:	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTT	(self)
ss5161936227	NC_000003.11:142042708::T	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTTTT	(self)
ss4082152792, ss5455406762, ss5694918444	NC_000003.12:142323866::T	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTTTT	(self)
6324141231	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTTTT	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTTTT	(self)
ss3710438788, ss3952565978	NC_000003.12:142323867::T	NC_000003.12:142323866:TTTTTTTTTT:… NC_000003.12:142323866:TTTTTTTTTT:TTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34983908

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34983908