Name: rs34589640
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34589640

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:188769117-188769133 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₇ / delTTT / delTT / delT / …
del(T)₇ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₆ / dup(T)₇ / dup(T)₈ / dup(T)₁₀ / ins(T)₁₀G(T)₃₇ / dup(T)₁₂ / ins(T)₅₉
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₇=0.0000 (0/9012, ALFA)
delTTT=0.0000 (0/9012, ALFA)
delTT=0.0000 (0/9012, ALFA) (+ 5 more)
delT=0.0000 (0/9012, ALFA)
dupT=0.0000 (0/9012, ALFA)
dupTT=0.0000 (0/9012, ALFA)
dupTTT=0.0000 (0/9012, ALFA)
delT=0.119 (64/536, NorthernSweden)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: DIRC1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	9012	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
European	Sub	6470	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African	Sub	1482	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
African Others	Sub	48	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
African American	Sub	1434	TTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000	1.0	N/A
Asian	Sub	94	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
East Asian	Sub	72	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other Asian	Sub	22	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 1	Sub	116	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A
Latin American 2	Sub	420	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A
South Asian	Sub	84	TTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00	1.0	N/A
Other	Sub	346	TTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	9012	(T)₁₇=1.0000	del(T)₇=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	6470	(T)₁₇=1.0000	del(T)₇=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	1482	(T)₁₇=1.0000	del(T)₇=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	420	(T)₁₇=1.000	del(T)₇=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	346	(T)₁₇=1.000	del(T)₇=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	116	(T)₁₇=1.000	del(T)₇=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Asian	Sub	94	(T)₁₇=1.00	del(T)₇=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	84	(T)₁₇=1.00	del(T)₇=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Northern Sweden	ACPOP	Study-wide	536	(T)₁₇=0.881	delT=0.119

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.188769127_188769133del
GRCh38.p14 chr 2	NC_000002.12:g.188769131_188769133del
GRCh38.p14 chr 2	NC_000002.12:g.188769132_188769133del
GRCh38.p14 chr 2	NC_000002.12:g.188769133del
GRCh38.p14 chr 2	NC_000002.12:g.188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769132_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769131_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769130_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769128_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769127_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769126_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769124_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769117_188769133T[27]GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1]
GRCh38.p14 chr 2	NC_000002.12:g.188769122_188769133dup
GRCh38.p14 chr 2	NC_000002.12:g.188769133_188769134insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 2	NC_000002.11:g.189633854_189633860del
GRCh37.p13 chr 2	NC_000002.11:g.189633858_189633860del
GRCh37.p13 chr 2	NC_000002.11:g.189633859_189633860del
GRCh37.p13 chr 2	NC_000002.11:g.189633860del
GRCh37.p13 chr 2	NC_000002.11:g.189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633859_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633858_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633857_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633855_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633854_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633853_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633851_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633844_189633860T[27]GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1]
GRCh37.p13 chr 2	NC_000002.11:g.189633849_189633860dup
GRCh37.p13 chr 2	NC_000002.11:g.189633860_189633861insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
DIRC1 RefSeqGene	NG_027691.1:g.25982_25988del
DIRC1 RefSeqGene	NG_027691.1:g.25986_25988del
DIRC1 RefSeqGene	NG_027691.1:g.25987_25988del
DIRC1 RefSeqGene	NG_027691.1:g.25988del
DIRC1 RefSeqGene	NG_027691.1:g.25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25987_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25986_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25985_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25983_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25982_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25981_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25979_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25972_25988A[37]CAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]
DIRC1 RefSeqGene	NG_027691.1:g.25977_25988dup
DIRC1 RefSeqGene	NG_027691.1:g.25988_25989insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gene: DIRC1, disrupted in renal carcinoma 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
DIRC1 transcript	NR_161166.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₇=	del(T)₇	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₆	dup(T)₇	dup(T)₈	dup(T)₁₀	ins(T)₁₀G(T)₃₇	dup(T)₁₂	ins(T)₅₉
GRCh38.p14 chr 2	NC_000002.12:g.188769117_188769133=	NC_000002.12:g.188769127_188769133del	NC_000002.12:g.188769131_188769133del	NC_000002.12:g.188769132_188769133del	NC_000002.12:g.188769133del	NC_000002.12:g.188769133dup	NC_000002.12:g.188769132_188769133dup	NC_000002.12:g.188769131_188769133dup	NC_000002.12:g.188769130_188769133dup	NC_000002.12:g.188769128_188769133dup	NC_000002.12:g.188769127_188769133dup	NC_000002.12:g.188769126_188769133dup	NC_000002.12:g.188769124_188769133dup	NC_000002.12:g.188769117_188769133T[27]GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1]	NC_000002.12:g.188769122_188769133dup	NC_000002.12:g.188769133_188769134insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
GRCh37.p13 chr 2	NC_000002.11:g.189633844_189633860=	NC_000002.11:g.189633854_189633860del	NC_000002.11:g.189633858_189633860del	NC_000002.11:g.189633859_189633860del	NC_000002.11:g.189633860del	NC_000002.11:g.189633860dup	NC_000002.11:g.189633859_189633860dup	NC_000002.11:g.189633858_189633860dup	NC_000002.11:g.189633857_189633860dup	NC_000002.11:g.189633855_189633860dup	NC_000002.11:g.189633854_189633860dup	NC_000002.11:g.189633853_189633860dup	NC_000002.11:g.189633851_189633860dup	NC_000002.11:g.189633844_189633860T[27]GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1]	NC_000002.11:g.189633849_189633860dup	NC_000002.11:g.189633860_189633861insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
DIRC1 RefSeqGene	NG_027691.1:g.25972_25988=	NG_027691.1:g.25982_25988del	NG_027691.1:g.25986_25988del	NG_027691.1:g.25987_25988del	NG_027691.1:g.25988del	NG_027691.1:g.25988dup	NG_027691.1:g.25987_25988dup	NG_027691.1:g.25986_25988dup	NG_027691.1:g.25985_25988dup	NG_027691.1:g.25983_25988dup	NG_027691.1:g.25982_25988dup	NG_027691.1:g.25981_25988dup	NG_027691.1:g.25979_25988dup	NG_027691.1:g.25972_25988A[37]CAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]	NG_027691.1:g.25977_25988dup	NG_027691.1:g.25988_25989insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
DIRC1 transcript	NM_052952.2:c.-30+20746=	NM_052952.2:c.-30+20740_-30+20746del	NM_052952.2:c.-30+20744_-30+20746del	NM_052952.2:c.-30+20745_-30+20746del	NM_052952.2:c.-30+20746del	NM_052952.2:c.-30+20746dup	NM_052952.2:c.-30+20745_-30+20746dup	NM_052952.2:c.-30+20744_-30+20746dup	NM_052952.2:c.-30+20743_-30+20746dup	NM_052952.2:c.-30+20741_-30+20746dup	NM_052952.2:c.-30+20740_-30+20746dup	NM_052952.2:c.-30+20739_-30+20746dup	NM_052952.2:c.-30+20737_-30+20746dup	NM_052952.2:c.-30+20746_-30+20747insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAA	NM_052952.2:c.-30+20735_-30+20746dup	NM_052952.2:c.-30+20746_-30+20747insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

31 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41822331	Mar 14, 2006 (126)
2	BCMHGSC_JDW	ss103640251	Mar 15, 2016 (147)
3	EVA_DECODE	ss3705655506	Jul 13, 2019 (153)
4	ACPOP	ss3729212599	Jul 13, 2019 (153)
5	EVA	ss3827413920	Apr 25, 2020 (154)
6	KOGIC	ss3949721665	Apr 25, 2020 (154)
7	KOGIC	ss3949721666	Apr 25, 2020 (154)
8	GNOMAD	ss4057706814	Apr 26, 2021 (155)
9	GNOMAD	ss4057706815	Apr 26, 2021 (155)
10	GNOMAD	ss4057706816	Apr 26, 2021 (155)
11	GNOMAD	ss4057706817	Apr 26, 2021 (155)
12	GNOMAD	ss4057706818	Apr 26, 2021 (155)
13	GNOMAD	ss4057706819	Apr 26, 2021 (155)
14	GNOMAD	ss4057706820	Apr 26, 2021 (155)
15	GNOMAD	ss4057706821	Apr 26, 2021 (155)
16	GNOMAD	ss4057706822	Apr 26, 2021 (155)
17	GNOMAD	ss4057706823	Apr 26, 2021 (155)
18	GNOMAD	ss4057706825	Apr 26, 2021 (155)
19	GNOMAD	ss4057706826	Apr 26, 2021 (155)
20	GNOMAD	ss4057706827	Apr 26, 2021 (155)
21	TOMMO_GENOMICS	ss5155646572	Apr 26, 2021 (155)
22	TOMMO_GENOMICS	ss5155646573	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5155646574	Apr 26, 2021 (155)
24	1000G_HIGH_COVERAGE	ss5251376602	Oct 17, 2022 (156)
25	HUGCELL_USP	ss5451057607	Oct 17, 2022 (156)
26	HUGCELL_USP	ss5451057608	Oct 17, 2022 (156)
27	HUGCELL_USP	ss5451057609	Oct 17, 2022 (156)
28	HUGCELL_USP	ss5451057610	Oct 17, 2022 (156)
29	TOMMO_GENOMICS	ss5686280360	Oct 17, 2022 (156)
30	TOMMO_GENOMICS	ss5686280361	Oct 17, 2022 (156)
31	TOMMO_GENOMICS	ss5686280362	Oct 17, 2022 (156)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 85331999 (NC_000002.12:188769116::T 2427/96718) Row 85332000 (NC_000002.12:188769116::TT 3937/96576) Row 85332001 (NC_000002.12:188769116::TTT 103/96782)...	-	Apr 26, 2021 (155)
46	Korean Genome Project Submission ignored due to conflicting rows: Row 6099666 (NC_000002.12:188769117:T: 55/1830) Row 6099667 (NC_000002.12:188769118::T 63/1830)	-	Apr 25, 2020 (154)
47	Korean Genome Project Submission ignored due to conflicting rows: Row 6099666 (NC_000002.12:188769117:T: 55/1830) Row 6099667 (NC_000002.12:188769118::T 63/1830)	-	Apr 25, 2020 (154)
48	Northern Sweden	NC_000002.11 - 189633844	Jul 13, 2019 (153)
49	8.3KJPN Submission ignored due to conflicting rows: Row 13615879 (NC_000002.11:189633843:T: 632/16754) Row 13615880 (NC_000002.11:189633843::T 731/16754) Row 13615881 (NC_000002.11:189633843::TT 3/16754)	-	Apr 26, 2021 (155)
50	8.3KJPN Submission ignored due to conflicting rows: Row 13615879 (NC_000002.11:189633843:T: 632/16754) Row 13615880 (NC_000002.11:189633843::T 731/16754) Row 13615881 (NC_000002.11:189633843::TT 3/16754)	-	Apr 26, 2021 (155)
51	8.3KJPN Submission ignored due to conflicting rows: Row 13615879 (NC_000002.11:189633843:T: 632/16754) Row 13615880 (NC_000002.11:189633843::T 731/16754) Row 13615881 (NC_000002.11:189633843::TT 3/16754)	-	Apr 26, 2021 (155)
52	14KJPN Submission ignored due to conflicting rows: Row 20117464 (NC_000002.12:188769116::T 1055/28062) Row 20117465 (NC_000002.12:188769116:T: 1005/28062) Row 20117466 (NC_000002.12:188769116::TT 3/28062)	-	Oct 17, 2022 (156)
53	14KJPN Submission ignored due to conflicting rows: Row 20117464 (NC_000002.12:188769116::T 1055/28062) Row 20117465 (NC_000002.12:188769116:T: 1005/28062) Row 20117466 (NC_000002.12:188769116::TT 3/28062)	-	Oct 17, 2022 (156)
54	14KJPN Submission ignored due to conflicting rows: Row 20117464 (NC_000002.12:188769116::T 1055/28062) Row 20117465 (NC_000002.12:188769116:T: 1005/28062) Row 20117466 (NC_000002.12:188769116::TT 3/28062)	-	Oct 17, 2022 (156)
55	ALFA	NC_000002.12 - 188769117	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs80092908	Oct 26, 2010 (133)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4057706827	NC_000002.12:188769116:TTTTTTT:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4057706826, ss5451057608	NC_000002.12:188769116:TT:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss103640251	NT_005403.17:39843276:TT:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
2497464, ss3729212599, ss3827413920, ss5155646572	NC_000002.11:189633843:T:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4057706825, ss5251376602, ss5451057607, ss5686280361	NC_000002.12:188769116:T:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss3949721665	NC_000002.12:188769117:T:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss41822331	NT_005403.17:39843277:T:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss5155646573	NC_000002.11:189633843::T	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4057706814, ss5451057609, ss5686280360	NC_000002.12:188769116::T	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3949721666	NC_000002.12:188769118::T	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3705655506	NC_000002.12:188769119::T	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss5155646574	NC_000002.11:189633843::TT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4057706815, ss5451057610, ss5686280362	NC_000002.12:188769116::TT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4057706816	NC_000002.12:188769116::TTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
9291442390	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4057706817	NC_000002.12:188769116::TTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706818	NC_000002.12:188769116::TTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706819	NC_000002.12:188769116::TTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706820	NC_000002.12:188769116::TTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706821	NC_000002.12:188769116::TTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706823	NC_000002.12:188769116::TTTTTTTTTT… NC_000002.12:188769116::TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4057706822	NC_000002.12:188769116::TTTTTTTTTT… NC_000002.12:188769116::TTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)
	NC_000002.12:188769116::TTTTTTTTTT… NC_000002.12:188769116::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3333377137	NC_000002.12:188769116:TTT:	NC_000002.12:188769116:TTTTTTTTTTT… NC_000002.12:188769116:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34589640

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34589640