Name: rs34443439
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34443439

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr11:5656356-5656371 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₅ / del(T)₄ / delTTT / delTT…
del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₁₀
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.3394 (1913/5636, ALFA)
delT=0.2468 (1236/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TRIM5 : Intron Variant
LOC107984302 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	5636	TTTTTTTTTTTTTTTT=0.4567	TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.2032, TTTTTTTTTTTTTTTTT=0.3394, TTTTTTTTTTTTTTTTTT=0.0007, TTTTTTTTTTTTTTTTTTT=0.0000	0.531369	0.309329	0.159302	32
European	Sub	4680	TTTTTTTTTTTTTTTT=0.3468	TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.2442, TTTTTTTTTTTTTTTTT=0.4081, TTTTTTTTTTTTTTTTTT=0.0009, TTTTTTTTTTTTTTTTTTT=0.0000	0.36846	0.417833	0.213707	32
African	Sub	764	TTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	42	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	722	TTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	22	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	20	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	2	TTTTTTTTTTTTTTTT=1.0	TTTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	14	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	70	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	12	TTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	74	TTTTTTTTTTTTTTTT=0.93	TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.03, TTTTTTTTTTTTTTTTT=0.04, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	0.942857	0.0	0.057143	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	5636	(T)₁₆=0.4567	del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.2032, dupT=0.3394, dupTT=0.0007, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	4680	(T)₁₆=0.3468	del(T)₄=0.0000, delTTT=0.0000, delTT=0.0000, delT=0.2442, dupT=0.4081, dupTT=0.0009, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	764	(T)₁₆=1.000	del(T)₄=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	74	(T)₁₆=0.93	del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.03, dupT=0.04, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 2	Sub	70	(T)₁₆=1.00	del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Asian	Sub	22	(T)₁₆=1.00	del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	14	(T)₁₆=1.00	del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	12	(T)₁₆=1.00	del(T)₄=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₆=0.7532	delT=0.2468
1000Genomes	African	Sub	1322	(T)₁₆=0.9478	delT=0.0522
1000Genomes	East Asian	Sub	1008	(T)₁₆=0.6885	delT=0.3115
1000Genomes	Europe	Sub	1006	(T)₁₆=0.7048	delT=0.2952
1000Genomes	South Asian	Sub	978	(T)₁₆=0.573	delT=0.427
1000Genomes	American	Sub	694	(T)₁₆=0.801	delT=0.199

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 11	NC_000011.10:g.5656367_5656371del
GRCh38.p14 chr 11	NC_000011.10:g.5656368_5656371del
GRCh38.p14 chr 11	NC_000011.10:g.5656369_5656371del
GRCh38.p14 chr 11	NC_000011.10:g.5656370_5656371del
GRCh38.p14 chr 11	NC_000011.10:g.5656371del
GRCh38.p14 chr 11	NC_000011.10:g.5656371dup
GRCh38.p14 chr 11	NC_000011.10:g.5656370_5656371dup
GRCh38.p14 chr 11	NC_000011.10:g.5656369_5656371dup
GRCh38.p14 chr 11	NC_000011.10:g.5656362_5656371dup
GRCh37.p13 chr 11	NC_000011.9:g.5677597_5677601del
GRCh37.p13 chr 11	NC_000011.9:g.5677598_5677601del
GRCh37.p13 chr 11	NC_000011.9:g.5677599_5677601del
GRCh37.p13 chr 11	NC_000011.9:g.5677600_5677601del
GRCh37.p13 chr 11	NC_000011.9:g.5677601del
GRCh37.p13 chr 11	NC_000011.9:g.5677601dup
GRCh37.p13 chr 11	NC_000011.9:g.5677600_5677601dup
GRCh37.p13 chr 11	NC_000011.9:g.5677599_5677601dup
GRCh37.p13 chr 11	NC_000011.9:g.5677592_5677601dup

Gene: TRIM5, tripartite motif containing 5 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TRIM5 transcript variant alpha	NM_033034.3:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant gamma	NM_033092.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant delta	NM_033093.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X8	XM_047427783.1:c.794+9296… XM_047427783.1:c.794+9296_794+9300del	N/A	Intron Variant
TRIM5 transcript variant X12	XM_047427784.1:c.745-1049… XM_047427784.1:c.745-10497_745-10493del	N/A	Intron Variant
TRIM5 transcript variant X1	XM_005253183.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X2	XM_005253184.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X11	XM_006718358.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X4	XM_011520426.4:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X3	XM_017018460.3:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X5	XM_017018461.3:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X12	XM_017018463.3:c.	N/A	Genic Downstream Transcript Variant
TRIM5 transcript variant X6	XR_001748014.3:n.	N/A	Intron Variant
TRIM5 transcript variant X7	XR_007062517.1:n.	N/A	Intron Variant
TRIM5 transcript variant X9	XR_007062518.1:n.	N/A	Intron Variant
TRIM5 transcript variant X10	XR_007062519.1:n.	N/A	Intron Variant
TRIM5 transcript variant X13	XR_007062520.1:n.	N/A	Intron Variant
TRIM5 transcript variant X14	XR_007062521.1:n.	N/A	Intron Variant
TRIM5 transcript variant X15	XR_007062522.1:n.	N/A	Intron Variant

Gene: LOC107984302, uncharacterized LOC107984302 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC107984302 transcript	XR_001748100.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₆=	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₁₀
GRCh38.p14 chr 11	NC_000011.10:g.5656356_5656371=	NC_000011.10:g.5656367_5656371del	NC_000011.10:g.5656368_5656371del	NC_000011.10:g.5656369_5656371del	NC_000011.10:g.5656370_5656371del	NC_000011.10:g.5656371del	NC_000011.10:g.5656371dup	NC_000011.10:g.5656370_5656371dup	NC_000011.10:g.5656369_5656371dup	NC_000011.10:g.5656362_5656371dup
GRCh37.p13 chr 11	NC_000011.9:g.5677586_5677601=	NC_000011.9:g.5677597_5677601del	NC_000011.9:g.5677598_5677601del	NC_000011.9:g.5677599_5677601del	NC_000011.9:g.5677600_5677601del	NC_000011.9:g.5677601del	NC_000011.9:g.5677601dup	NC_000011.9:g.5677600_5677601dup	NC_000011.9:g.5677599_5677601dup	NC_000011.9:g.5677592_5677601dup
TRIM5 transcript variant X4	XM_005253186.1:c.745-667=	XM_005253186.1:c.745-671_745-667del	XM_005253186.1:c.745-670_745-667del	XM_005253186.1:c.745-669_745-667del	XM_005253186.1:c.745-668_745-667del	XM_005253186.1:c.745-667del	XM_005253186.1:c.745-667dup	XM_005253186.1:c.745-668_745-667dup	XM_005253186.1:c.745-669_745-667dup	XM_005253186.1:c.745-676_745-667dup
TRIM5 transcript variant X8	XM_047427783.1:c.794+9300=	XM_047427783.1:c.794+9296_794+9300del	XM_047427783.1:c.794+9297_794+9300del	XM_047427783.1:c.794+9298_794+9300del	XM_047427783.1:c.794+9299_794+9300del	XM_047427783.1:c.794+9300del	XM_047427783.1:c.794+9300dup	XM_047427783.1:c.794+9299_794+9300dup	XM_047427783.1:c.794+9298_794+9300dup	XM_047427783.1:c.794+9291_794+9300dup
TRIM5 transcript variant X12	XM_047427784.1:c.745-10493=	XM_047427784.1:c.745-10497_745-10493del	XM_047427784.1:c.745-10496_745-10493del	XM_047427784.1:c.745-10495_745-10493del	XM_047427784.1:c.745-10494_745-10493del	XM_047427784.1:c.745-10493del	XM_047427784.1:c.745-10493dup	XM_047427784.1:c.745-10494_745-10493dup	XM_047427784.1:c.745-10495_745-10493dup	XM_047427784.1:c.745-10502_745-10493dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

58 SubSNP, 25 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss39985941	Dec 03, 2013 (138)
2	ABI	ss39998275	Mar 15, 2006 (126)
3	HUMANGENOME_JCVI	ss95559229	Feb 06, 2009 (130)
4	GMI	ss287869319	May 09, 2011 (137)
5	GMI	ss289050538	May 04, 2012 (137)
6	PJP	ss294686809	Jan 10, 2018 (151)
7	PJP	ss294686810	Jan 10, 2018 (151)
8	SSMP	ss664059031	Apr 01, 2015 (144)
9	BILGI_BIOE	ss666523012	Apr 25, 2013 (138)
10	1000GENOMES	ss1370461949	Aug 21, 2014 (142)
11	EVA_UK10K_ALSPAC	ss1706981901	Apr 01, 2015 (144)
12	EVA_UK10K_TWINSUK	ss1706982164	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1710498415	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1710498425	Apr 01, 2015 (144)
15	SWEGEN	ss3007530015	Jan 10, 2018 (151)
16	MCHAISSO	ss3064502042	Nov 08, 2017 (151)
17	MCHAISSO	ss3065413875	Nov 08, 2017 (151)
18	URBANLAB	ss3649522721	Oct 12, 2018 (152)
19	EVA_DECODE	ss3691134781	Jul 13, 2019 (153)
20	EVA_DECODE	ss3691134782	Jul 13, 2019 (153)
21	EVA_DECODE	ss3691134783	Jul 13, 2019 (153)
22	EVA_DECODE	ss3691134784	Jul 13, 2019 (153)
23	EVA_DECODE	ss3691134785	Jul 13, 2019 (153)
24	ACPOP	ss3737883039	Jul 13, 2019 (153)
25	ACPOP	ss3737883040	Jul 13, 2019 (153)
26	PACBIO	ss3786853782	Jul 13, 2019 (153)
27	PACBIO	ss3786853783	Jul 13, 2019 (153)
28	PACBIO	ss3792008941	Jul 13, 2019 (153)
29	PACBIO	ss3796890969	Jul 13, 2019 (153)
30	KHV_HUMAN_GENOMES	ss3814241170	Jul 13, 2019 (153)
31	EVA	ss3832455025	Apr 26, 2020 (154)
32	KOGIC	ss3969127207	Apr 26, 2020 (154)
33	KOGIC	ss3969127208	Apr 26, 2020 (154)
34	KOGIC	ss3969127209	Apr 26, 2020 (154)
35	GNOMAD	ss4229360861	Apr 26, 2021 (155)
36	GNOMAD	ss4229360862	Apr 26, 2021 (155)
37	GNOMAD	ss4229360863	Apr 26, 2021 (155)
38	GNOMAD	ss4229360864	Apr 26, 2021 (155)
39	GNOMAD	ss4229360865	Apr 26, 2021 (155)
40	GNOMAD	ss4229360866	Apr 26, 2021 (155)
41	GNOMAD	ss4229360867	Apr 26, 2021 (155)
42	GNOMAD	ss4229360868	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5200506254	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5200506255	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5200506256	Apr 26, 2021 (155)
46	1000G_HIGH_COVERAGE	ss5286264551	Oct 16, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5286264552	Oct 16, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5286264553	Oct 16, 2022 (156)
49	HUGCELL_USP	ss5481582102	Oct 16, 2022 (156)
50	HUGCELL_USP	ss5481582103	Oct 16, 2022 (156)
51	HUGCELL_USP	ss5481582104	Oct 16, 2022 (156)
52	TOMMO_GENOMICS	ss5747210327	Oct 16, 2022 (156)
53	TOMMO_GENOMICS	ss5747210328	Oct 16, 2022 (156)
54	TOMMO_GENOMICS	ss5747210329	Oct 16, 2022 (156)
55	EVA	ss5836206470	Oct 16, 2022 (156)
56	EVA	ss5836206471	Oct 16, 2022 (156)
57	EVA	ss5836206472	Oct 16, 2022 (156)
58	EVA	ss5980657217	Oct 16, 2022 (156)
59	1000Genomes	NC_000011.9 - 5677586	Oct 12, 2018 (152)
60	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 29122104 (NC_000011.9:5677585::T 1804/3854) Row 29122105 (NC_000011.9:5677585:T: 1375/3854)	-	Oct 12, 2018 (152)
61	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 29122104 (NC_000011.9:5677585::T 1804/3854) Row 29122105 (NC_000011.9:5677585:T: 1375/3854)	-	Oct 12, 2018 (152)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
69	gnomAD - Genomes Submission ignored due to conflicting rows: Row 370215086 (NC_000011.10:5656355::T 59594/131252) Row 370215087 (NC_000011.10:5656355::TT 1066/131346) Row 370215088 (NC_000011.10:5656355::TTT 5/131370)...	-	Apr 26, 2021 (155)
70	Korean Genome Project Submission ignored due to conflicting rows: Row 25505208 (NC_000011.10:5656355:T: 629/1830) Row 25505209 (NC_000011.10:5656356::T 493/1830) Row 25505210 (NC_000011.10:5656356::TT 34/1830)	-	Apr 26, 2020 (154)
71	Korean Genome Project Submission ignored due to conflicting rows: Row 25505208 (NC_000011.10:5656355:T: 629/1830) Row 25505209 (NC_000011.10:5656356::T 493/1830) Row 25505210 (NC_000011.10:5656356::TT 34/1830)	-	Apr 26, 2020 (154)
72	Korean Genome Project Submission ignored due to conflicting rows: Row 25505208 (NC_000011.10:5656355:T: 629/1830) Row 25505209 (NC_000011.10:5656356::T 493/1830) Row 25505210 (NC_000011.10:5656356::TT 34/1830)	-	Apr 26, 2020 (154)
73	Northern Sweden Submission ignored due to conflicting rows: Row 11167904 (NC_000011.9:5677585:T: 128/590) Row 11167905 (NC_000011.9:5677585::T 274/590)	-	Jul 13, 2019 (153)
74	Northern Sweden Submission ignored due to conflicting rows: Row 11167904 (NC_000011.9:5677585:T: 128/590) Row 11167905 (NC_000011.9:5677585::T 274/590)	-	Jul 13, 2019 (153)
75	8.3KJPN Submission ignored due to conflicting rows: Row 58475561 (NC_000011.9:5677585::T 4920/16750) Row 58475562 (NC_000011.9:5677585:T: 6194/16750) Row 58475563 (NC_000011.9:5677585::TT 5/16750)	-	Apr 26, 2021 (155)
76	8.3KJPN Submission ignored due to conflicting rows: Row 58475561 (NC_000011.9:5677585::T 4920/16750) Row 58475562 (NC_000011.9:5677585:T: 6194/16750) Row 58475563 (NC_000011.9:5677585::TT 5/16750)	-	Apr 26, 2021 (155)
77	8.3KJPN Submission ignored due to conflicting rows: Row 58475561 (NC_000011.9:5677585::T 4920/16750) Row 58475562 (NC_000011.9:5677585:T: 6194/16750) Row 58475563 (NC_000011.9:5677585::TT 5/16750)	-	Apr 26, 2021 (155)
78	14KJPN Submission ignored due to conflicting rows: Row 81047431 (NC_000011.10:5656355::T 8432/28258) Row 81047432 (NC_000011.10:5656355:T: 10473/28258) Row 81047433 (NC_000011.10:5656355::TT 7/28258)	-	Oct 16, 2022 (156)
79	14KJPN Submission ignored due to conflicting rows: Row 81047431 (NC_000011.10:5656355::T 8432/28258) Row 81047432 (NC_000011.10:5656355:T: 10473/28258) Row 81047433 (NC_000011.10:5656355::TT 7/28258)	-	Oct 16, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 81047431 (NC_000011.10:5656355::T 8432/28258) Row 81047432 (NC_000011.10:5656355:T: 10473/28258) Row 81047433 (NC_000011.10:5656355::TT 7/28258)	-	Oct 16, 2022 (156)
81	UK 10K study - Twins Submission ignored due to conflicting rows: Row 29122104 (NC_000011.9:5677585::T 1848/3708) Row 29122105 (NC_000011.9:5677585:T: 1261/3708)	-	Oct 12, 2018 (152)
82	UK 10K study - Twins Submission ignored due to conflicting rows: Row 29122104 (NC_000011.9:5677585::T 1848/3708) Row 29122105 (NC_000011.9:5677585:T: 1261/3708)	-	Oct 12, 2018 (152)
83	ALFA	NC_000011.10 - 5656356	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs75237517	May 13, 2013 (138)
rs398054942	Apr 01, 2015 (144)
rs142112342	May 11, 2012 (137)
rs370338391	May 13, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4229360868	NC_000011.10:5656355:TTTTT:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4229360867	NC_000011.10:5656355:TTTT:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss4229360866	NC_000011.10:5656355:TTT:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3786853782	NC_000011.9:5677585:TT:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3691134781, ss4229360865	NC_000011.10:5656355:TT:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss289050538	NC_000011.8:5634161:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
52432275, ss664059031, ss1370461949, ss1706981901, ss1706982164, ss3007530015, ss3737883039, ss3786853783, ss3792008941, ss3796890969, ss5200506255, ss5836206470, ss5980657217	NC_000011.9:5677585:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3814241170, ss3969127207, ss4229360864, ss5286264551, ss5481582103, ss5747210328	NC_000011.10:5656355:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3691134782	NC_000011.10:5656356:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss287869319	NT_009237.18:5617585:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss39985941	NT_009237.18:5617600:T:	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss294686809	NC_000011.8:5634162::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss294686810	NC_000011.8:5634177::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss666523012, ss3737883040, ss3832455025, ss5200506254, ss5836206471	NC_000011.9:5677585::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss1710498415, ss1710498425	NC_000011.9:5677586::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3064502042, ss3065413875, ss3649522721, ss4229360861, ss5286264552, ss5481582102, ss5747210327	NC_000011.10:5656355::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3969127208	NC_000011.10:5656356::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3691134783	NC_000011.10:5656357::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss39998275, ss95559229	NT_009237.18:5617601::T	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss5200506256, ss5836206472	NC_000011.9:5677585::TT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4229360862, ss5286264553, ss5481582104, ss5747210329	NC_000011.10:5656355::TT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3969127209	NC_000011.10:5656356::TT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3691134784	NC_000011.10:5656357::TT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4229360863	NC_000011.10:5656355::TTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
3407601822	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3691134785	NC_000011.10:5656357::TTTTTTTTTT	NC_000011.10:5656355:TTTTTTTTTTTTT… NC_000011.10:5656355:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34443439

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs34443439