Name: rs1491432587
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1491432587

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:73563014-73563015 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: insA / insATA / insATATA / ins(AT)…
insA / insATA / insATATA / ins(AT)₃A / ins(AT)₄A / ins(AT)₅A / ins(AT)₆A / ins(AT)₇A / ins(AT)₈A / ins(AT)₉A / ins(AT)₁₀A / ins(AT)₁₁A / ins(AT)₁₂A / ins(AT)₁₃A / ins(AT)₁₅A / ins(AT)₃G(TA)₄ / insATATG
Variation Type: Insertion
Frequency: insA=0.0000 (0/9192, ALFA)
insATA=0.0000 (0/9192, ALFA)
insATATA=0.0000 (0/9192, ALFA) (+ 8 more)
ins(AT)₃A=0.0000 (0/9192, ALFA)
ins(AT)₄A=0.0000 (0/9192, ALFA)
ins(AT)₅A=0.0000 (0/9192, ALFA)
ins(AT)₆A=0.0000 (0/9192, ALFA)
ins(AT)₇A=0.0000 (0/9192, ALFA)
ins(AT)₈A=0.0000 (0/9192, ALFA)
ins(AT)₃G(TA)₄=0.0000 (0/9192, ALFA)
insATATG=0.0000 (0/9192, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PDZRN3 : Intron Variant
LOC101927296 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	9192	=1.0000	A=0.0000, ATA=0.0000, ATATA=0.0000, ATATATA=0.0000, ATATATATA=0.0000, ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000, ATATATGTATATATA=0.0000, ATATG=0.0000	1.0	N/A
European	Sub	5912	=1.0000	A=0.0000, ATA=0.0000, ATATA=0.0000, ATATATA=0.0000, ATATATATA=0.0000, ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000, ATATATGTATATATA=0.0000, ATATG=0.0000	1.0	N/A
African	Sub	2246	=1.0000	A=0.0000, ATA=0.0000, ATATA=0.0000, ATATATA=0.0000, ATATATATA=0.0000, ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000, ATATATGTATATATA=0.0000, ATATG=0.0000	1.0	N/A
African Others	Sub	90	=1.00	A=0.00, ATA=0.00, ATATA=0.00, ATATATA=0.00, ATATATATA=0.00, ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00, ATATATGTATATATA=0.00, ATATG=0.00	1.0	N/A
African American	Sub	2156	=1.0000	A=0.0000, ATA=0.0000, ATATA=0.0000, ATATATA=0.0000, ATATATATA=0.0000, ATATATATATA=0.0000, ATATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000, ATATATGTATATATA=0.0000, ATATG=0.0000	1.0	N/A
Asian	Sub	76	=1.00	A=0.00, ATA=0.00, ATATA=0.00, ATATATA=0.00, ATATATATA=0.00, ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00, ATATATGTATATATA=0.00, ATATG=0.00	1.0	N/A
East Asian	Sub	60	=1.00	A=0.00, ATA=0.00, ATATA=0.00, ATATATA=0.00, ATATATATA=0.00, ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00, ATATATGTATATATA=0.00, ATATG=0.00	1.0	N/A
Other Asian	Sub	16	=1.00	A=0.00, ATA=0.00, ATATA=0.00, ATATATA=0.00, ATATATATA=0.00, ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00, ATATATGTATATATA=0.00, ATATG=0.00	1.0	N/A
Latin American 1	Sub	104	=1.000	A=0.000, ATA=0.000, ATATA=0.000, ATATATA=0.000, ATATATATA=0.000, ATATATATATA=0.000, ATATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATA=0.000, ATATATGTATATATA=0.000, ATATG=0.000	1.0	N/A
Latin American 2	Sub	450	=1.000	A=0.000, ATA=0.000, ATATA=0.000, ATATATA=0.000, ATATATATA=0.000, ATATATATATA=0.000, ATATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATA=0.000, ATATATGTATATATA=0.000, ATATG=0.000	1.0	N/A
South Asian	Sub	68	=1.00	A=0.00, ATA=0.00, ATATA=0.00, ATATATA=0.00, ATATATATA=0.00, ATATATATATA=0.00, ATATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00, ATATATGTATATATA=0.00, ATATG=0.00	1.0	N/A
Other	Sub	336	=1.000	A=0.000, ATA=0.000, ATATA=0.000, ATATATA=0.000, ATATATATA=0.000, ATATATATATA=0.000, ATATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATA=0.000, ATATATGTATATATA=0.000, ATATG=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	9192	- No frequency provided	insA=0.0000, insATA=0.0000, insATATA=0.0000, ins(AT)₃A=0.0000, ins(AT)₄A=0.0000, ins(AT)₅A=0.0000, ins(AT)₆A=0.0000, ins(AT)₇A=0.0000, ins(AT)₈A=0.0000, ins(AT)₃G(TA)₄=0.0000, insATATG=0.0000
Allele Frequency Aggregator	European	Sub	5912	- No frequency provided	insA=0.0000, insATA=0.0000, insATATA=0.0000, ins(AT)₃A=0.0000, ins(AT)₄A=0.0000, ins(AT)₅A=0.0000, ins(AT)₆A=0.0000, ins(AT)₇A=0.0000, ins(AT)₈A=0.0000, ins(AT)₃G(TA)₄=0.0000, insATATG=0.0000
Allele Frequency Aggregator	African	Sub	2246	- No frequency provided	insA=0.0000, insATA=0.0000, insATATA=0.0000, ins(AT)₃A=0.0000, ins(AT)₄A=0.0000, ins(AT)₅A=0.0000, ins(AT)₆A=0.0000, ins(AT)₇A=0.0000, ins(AT)₈A=0.0000, ins(AT)₃G(TA)₄=0.0000, insATATG=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	450	- No frequency provided	insA=0.000, insATA=0.000, insATATA=0.000, ins(AT)₃A=0.000, ins(AT)₄A=0.000, ins(AT)₅A=0.000, ins(AT)₆A=0.000, ins(AT)₇A=0.000, ins(AT)₈A=0.000, ins(AT)₃G(TA)₄=0.000, insATATG=0.000
Allele Frequency Aggregator	Other	Sub	336	- No frequency provided	insA=0.000, insATA=0.000, insATATA=0.000, ins(AT)₃A=0.000, ins(AT)₄A=0.000, ins(AT)₅A=0.000, ins(AT)₆A=0.000, ins(AT)₇A=0.000, ins(AT)₈A=0.000, ins(AT)₃G(TA)₄=0.000, insATATG=0.000
Allele Frequency Aggregator	Latin American 1	Sub	104	- No frequency provided	insA=0.000, insATA=0.000, insATATA=0.000, ins(AT)₃A=0.000, ins(AT)₄A=0.000, ins(AT)₅A=0.000, ins(AT)₆A=0.000, ins(AT)₇A=0.000, ins(AT)₈A=0.000, ins(AT)₃G(TA)₄=0.000, insATATG=0.000
Allele Frequency Aggregator	Asian	Sub	76	- No frequency provided	insA=0.00, insATA=0.00, insATATA=0.00, ins(AT)₃A=0.00, ins(AT)₄A=0.00, ins(AT)₅A=0.00, ins(AT)₆A=0.00, ins(AT)₇A=0.00, ins(AT)₈A=0.00, ins(AT)₃G(TA)₄=0.00, insATATG=0.00
Allele Frequency Aggregator	South Asian	Sub	68	- No frequency provided	insA=0.00, insATA=0.00, insATATA=0.00, ins(AT)₃A=0.00, ins(AT)₄A=0.00, ins(AT)₅A=0.00, ins(AT)₆A=0.00, ins(AT)₇A=0.00, ins(AT)₈A=0.00, ins(AT)₃G(TA)₄=0.00, insATATG=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATATGTATATATA
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015insATATG
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATATGTATATATA
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166insATATG
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATATATATATATATATATATATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insTATATATACATATAT
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908insCATAT

Gene: PDZRN3, PDZ domain containing ring finger 3 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PDZRN3 transcript variant 2	NM_001303139.2:c.12+6136_… NM_001303139.2:c.12+6136_12+6137insT	N/A	Intron Variant
PDZRN3 transcript variant 1	NM_015009.3:c.918+39339_9… NM_015009.3:c.918+39339_918+39340insT	N/A	Intron Variant
PDZRN3 transcript variant 3	NM_001303140.2:c.	N/A	Genic Upstream Transcript Variant
PDZRN3 transcript variant 4	NM_001303141.2:c.	N/A	Genic Upstream Transcript Variant
PDZRN3 transcript variant 5	NM_001303142.2:c.	N/A	Genic Upstream Transcript Variant
PDZRN3 transcript variant X1	XM_017005942.3:c.831+3933… XM_017005942.3:c.831+39339_831+39340insT	N/A	Intron Variant

Gene: LOC101927296, uncharacterized LOC101927296 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC101927296 transcript	NR_121660.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	=	insA	insATA	insATATA	ins(AT)₃A	ins(AT)₄A	ins(AT)₅A	ins(AT)₆A	ins(AT)₇A	ins(AT)₈A	ins(AT)₉A	ins(AT)₁₀A	ins(AT)₁₁A	ins(AT)₁₂A	ins(AT)₁₃A	ins(AT)₁₅A	ins(AT)₃G(TA)₄	insATATG
GRCh38.p14 chr 3	NC_000003.12:g.73563014_73563015=	NC_000003.12:g.73563014_73563015insA	NC_000003.12:g.73563014_73563015insATA	NC_000003.12:g.73563014_73563015insATATA	NC_000003.12:g.73563014_73563015insATATATA	NC_000003.12:g.73563014_73563015insATATATATA	NC_000003.12:g.73563014_73563015insATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATATATATATATATATATATATATATA	NC_000003.12:g.73563014_73563015insATATATGTATATATA	NC_000003.12:g.73563014_73563015insATATG
GRCh37.p13 chr 3	NC_000003.11:g.73612165_73612166=	NC_000003.11:g.73612165_73612166insA	NC_000003.11:g.73612165_73612166insATA	NC_000003.11:g.73612165_73612166insATATA	NC_000003.11:g.73612165_73612166insATATATA	NC_000003.11:g.73612165_73612166insATATATATA	NC_000003.11:g.73612165_73612166insATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATATATATATATATATATATATATATA	NC_000003.11:g.73612165_73612166insATATATGTATATATA	NC_000003.11:g.73612165_73612166insATATG
PDZRN3 RefSeqGene	NG_047128.1:g.66907_66908=	NG_047128.1:g.66907_66908insT	NG_047128.1:g.66907_66908insTAT	NG_047128.1:g.66907_66908insTATAT	NG_047128.1:g.66907_66908insTATATAT	NG_047128.1:g.66907_66908insTATATATAT	NG_047128.1:g.66907_66908insTATATATATAT	NG_047128.1:g.66907_66908insTATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATATATATATATATATATATATATAT	NG_047128.1:g.66907_66908insTATATATACATATAT	NG_047128.1:g.66907_66908insCATAT
PDZRN3 transcript variant 2	NM_001303139.2:c.12+6136=	NM_001303139.2:c.12+6136_12+6137insT	NM_001303139.2:c.12+6136_12+6137insTAT	NM_001303139.2:c.12+6136_12+6137insTATAT	NM_001303139.2:c.12+6136_12+6137insTATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATATATATATATATATATATATATAT	NM_001303139.2:c.12+6136_12+6137insTATATATACATATAT	NM_001303139.2:c.12+6136_12+6137insCATAT
PDZRN3 transcript	NM_015009.1:c.918+39339=	NM_015009.1:c.918+39339_918+39340insT	NM_015009.1:c.918+39339_918+39340insTAT	NM_015009.1:c.918+39339_918+39340insTATAT	NM_015009.1:c.918+39339_918+39340insTATATAT	NM_015009.1:c.918+39339_918+39340insTATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATATATATATATATATATATATATAT	NM_015009.1:c.918+39339_918+39340insTATATATACATATAT	NM_015009.1:c.918+39339_918+39340insCATAT
PDZRN3 transcript variant 1	NM_015009.3:c.918+39339=	NM_015009.3:c.918+39339_918+39340insT	NM_015009.3:c.918+39339_918+39340insTAT	NM_015009.3:c.918+39339_918+39340insTATAT	NM_015009.3:c.918+39339_918+39340insTATATAT	NM_015009.3:c.918+39339_918+39340insTATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATATATATATATATATATATATATAT	NM_015009.3:c.918+39339_918+39340insTATATATACATATAT	NM_015009.3:c.918+39339_918+39340insCATAT
PDZRN3 transcript variant X3	XM_005264719.1:c.12+6136=	XM_005264719.1:c.12+6136_12+6137insT	XM_005264719.1:c.12+6136_12+6137insTAT	XM_005264719.1:c.12+6136_12+6137insTATAT	XM_005264719.1:c.12+6136_12+6137insTATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATATATATATATATATATATATATAT	XM_005264719.1:c.12+6136_12+6137insTATATATACATATAT	XM_005264719.1:c.12+6136_12+6137insCATAT
PDZRN3 transcript variant X1	XM_017005942.3:c.831+39339=	XM_017005942.3:c.831+39339_831+39340insT	XM_017005942.3:c.831+39339_831+39340insTAT	XM_017005942.3:c.831+39339_831+39340insTATAT	XM_017005942.3:c.831+39339_831+39340insTATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATATATATATATATATATATATATAT	XM_017005942.3:c.831+39339_831+39340insTATATATACATATAT	XM_017005942.3:c.831+39339_831+39340insCATAT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

32 SubSNP, 27 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	URBANLAB	ss3647436287	Oct 12, 2018 (152)
2	PACBIO	ss3789864555	Jul 13, 2019 (153)
3	PACBIO	ss3794738623	Jul 13, 2019 (153)
4	EVA	ss3827884375	Apr 25, 2020 (154)
5	KOGIC	ss3951564824	Apr 25, 2020 (154)
6	KOGIC	ss3951564825	Apr 25, 2020 (154)
7	KOGIC	ss3951564826	Apr 25, 2020 (154)
8	KOGIC	ss3951564827	Apr 25, 2020 (154)
9	GNOMAD	ss4073812079	Apr 26, 2021 (155)
10	GNOMAD	ss4073812080	Apr 26, 2021 (155)
11	GNOMAD	ss4073812081	Apr 26, 2021 (155)
12	GNOMAD	ss4073812082	Apr 26, 2021 (155)
13	GNOMAD	ss4073812083	Apr 26, 2021 (155)
14	GNOMAD	ss4073812084	Apr 26, 2021 (155)
15	GNOMAD	ss4073812085	Apr 26, 2021 (155)
16	GNOMAD	ss4073812086	Apr 26, 2021 (155)
17	GNOMAD	ss4073812087	Apr 26, 2021 (155)
18	GNOMAD	ss4073812088	Apr 26, 2021 (155)
19	GNOMAD	ss4073812089	Apr 26, 2021 (155)
20	GNOMAD	ss4073812090	Apr 26, 2021 (155)
21	TOMMO_GENOMICS	ss5159837396	Apr 26, 2021 (155)
22	TOMMO_GENOMICS	ss5159837397	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5159837398	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5159837399	Apr 26, 2021 (155)
25	TOMMO_GENOMICS	ss5159837400	Apr 26, 2021 (155)
26	HUGCELL_USP	ss5453947466	Oct 12, 2022 (156)
27	HUGCELL_USP	ss5453947467	Oct 12, 2022 (156)
28	TOMMO_GENOMICS	ss5691698394	Oct 12, 2022 (156)
29	TOMMO_GENOMICS	ss5691698395	Oct 12, 2022 (156)
30	TOMMO_GENOMICS	ss5691698396	Oct 12, 2022 (156)
31	TOMMO_GENOMICS	ss5691698397	Oct 12, 2022 (156)
32	TOMMO_GENOMICS	ss5691698398	Oct 12, 2022 (156)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 112228849 (NC_000003.12:73563014::ATATATATA 16/19434) Row 112228850 (NC_000003.12:73563014::ATATATATATA 24/19390) Row 112228851 (NC_000003.12:73563014::ATATATATATATA 44/19374)...	-	Apr 26, 2021 (155)
45	Korean Genome Project Submission ignored due to conflicting rows: Row 7942825 (NC_000003.12:73563014::ATATATATATA 18/828) Row 7942826 (NC_000003.12:73563014::ATATATA 6/828) Row 7942827 (NC_000003.12:73563014::A 137/828)...	-	Apr 25, 2020 (154)
46	Korean Genome Project Submission ignored due to conflicting rows: Row 7942825 (NC_000003.12:73563014::ATATATATATA 18/828) Row 7942826 (NC_000003.12:73563014::ATATATA 6/828) Row 7942827 (NC_000003.12:73563014::A 137/828)...	-	Apr 25, 2020 (154)
47	Korean Genome Project Submission ignored due to conflicting rows: Row 7942825 (NC_000003.12:73563014::ATATATATATA 18/828) Row 7942826 (NC_000003.12:73563014::ATATATA 6/828) Row 7942827 (NC_000003.12:73563014::A 137/828)...	-	Apr 25, 2020 (154)
48	Korean Genome Project Submission ignored due to conflicting rows: Row 7942825 (NC_000003.12:73563014::ATATATATATA 18/828) Row 7942826 (NC_000003.12:73563014::ATATATA 6/828) Row 7942827 (NC_000003.12:73563014::A 137/828)...	-	Apr 25, 2020 (154)
49	8.3KJPN Submission ignored due to conflicting rows: Row 17806703 (NC_000003.11:73612165::A 5535/12466) Row 17806704 (NC_000003.11:73612165::ATATATATATATATA 112/12466) Row 17806705 (NC_000003.11:73612165::ATATATATATATATATATATA 108/12466)...	-	Apr 26, 2021 (155)
50	8.3KJPN Submission ignored due to conflicting rows: Row 17806703 (NC_000003.11:73612165::A 5535/12466) Row 17806704 (NC_000003.11:73612165::ATATATATATATATA 112/12466) Row 17806705 (NC_000003.11:73612165::ATATATATATATATATATATA 108/12466)...	-	Apr 26, 2021 (155)
51	8.3KJPN Submission ignored due to conflicting rows: Row 17806703 (NC_000003.11:73612165::A 5535/12466) Row 17806704 (NC_000003.11:73612165::ATATATATATATATA 112/12466) Row 17806705 (NC_000003.11:73612165::ATATATATATATATATATATA 108/12466)...	-	Apr 26, 2021 (155)
52	8.3KJPN Submission ignored due to conflicting rows: Row 17806703 (NC_000003.11:73612165::A 5535/12466) Row 17806704 (NC_000003.11:73612165::ATATATATATATATA 112/12466) Row 17806705 (NC_000003.11:73612165::ATATATATATATATATATATA 108/12466)...	-	Apr 26, 2021 (155)
53	8.3KJPN Submission ignored due to conflicting rows: Row 17806703 (NC_000003.11:73612165::A 5535/12466) Row 17806704 (NC_000003.11:73612165::ATATATATATATATA 112/12466) Row 17806705 (NC_000003.11:73612165::ATATATATATATATATATATA 108/12466)...	-	Apr 26, 2021 (155)
54	14KJPN Submission ignored due to conflicting rows: Row 25535498 (NC_000003.12:73563014::A 13077/24920) Row 25535499 (NC_000003.12:73563014::ATATATATATATATATATA 213/24920) Row 25535500 (NC_000003.12:73563014::ATATATATATATA 150/24920)...	-	Oct 12, 2022 (156)
55	14KJPN Submission ignored due to conflicting rows: Row 25535498 (NC_000003.12:73563014::A 13077/24920) Row 25535499 (NC_000003.12:73563014::ATATATATATATATATATA 213/24920) Row 25535500 (NC_000003.12:73563014::ATATATATATATA 150/24920)...	-	Oct 12, 2022 (156)
56	14KJPN Submission ignored due to conflicting rows: Row 25535498 (NC_000003.12:73563014::A 13077/24920) Row 25535499 (NC_000003.12:73563014::ATATATATATATATATATA 213/24920) Row 25535500 (NC_000003.12:73563014::ATATATATATATA 150/24920)...	-	Oct 12, 2022 (156)
57	14KJPN Submission ignored due to conflicting rows: Row 25535498 (NC_000003.12:73563014::A 13077/24920) Row 25535499 (NC_000003.12:73563014::ATATATATATATATATATA 213/24920) Row 25535500 (NC_000003.12:73563014::ATATATATATATA 150/24920)...	-	Oct 12, 2022 (156)
58	14KJPN Submission ignored due to conflicting rows: Row 25535498 (NC_000003.12:73563014::A 13077/24920) Row 25535499 (NC_000003.12:73563014::ATATATATATATATATATA 213/24920) Row 25535500 (NC_000003.12:73563014::ATATATATATATA 150/24920)...	-	Oct 12, 2022 (156)
59	ALFA	NC_000003.12 - 73563015	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3827884375, ss5159837396	NC_000003.11:73612165::A	NC_000003.12:73563014::A	(self)
11498365932, ss3951564826, ss5453947466, ss5691698394	NC_000003.12:73563014::A	NC_000003.12:73563014::A	(self)
11498365932	NC_000003.12:73563014::ATA	NC_000003.12:73563014::ATA	(self)
11498365932	NC_000003.12:73563014::ATATA	NC_000003.12:73563014::ATATA	(self)
11498365932, ss3951564825	NC_000003.12:73563014::ATATATA	NC_000003.12:73563014::ATATATA	(self)
11498365932, ss3647436287, ss4073812079	NC_000003.12:73563014::ATATATATA	NC_000003.12:73563014::ATATATATA	(self)
11498365932, ss3951564824, ss4073812080	NC_000003.12:73563014::ATATATATATA	NC_000003.12:73563014::ATATATATATA	(self)
11498365932, ss3951564827, ss4073812081, ss5691698396	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATA	(self)
ss5159837397	NC_000003.11:73612165::ATATATATATA… NC_000003.11:73612165::ATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATA	(self)
11498365932, ss4073812082, ss5453947467, ss5691698398	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATA	(self)
ss5159837400	NC_000003.11:73612165::ATATATATATA… NC_000003.11:73612165::ATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATA	(self)
11498365932, ss4073812083, ss5691698397	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATA	(self)
ss3789864555, ss3794738623, ss5159837399	NC_000003.11:73612165::ATATATATATA… NC_000003.11:73612165::ATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATA	(self)
ss4073812084, ss5691698395	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATA	(self)
ss5159837398	NC_000003.11:73612165::ATATATATATA… NC_000003.11:73612165::ATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATA	(self)
ss4073812085	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATA	(self)
ss4073812086	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATA	(self)
ss4073812087	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATA	(self)
ss4073812088	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATATA	(self)
ss4073812089	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATATATATA	NC_000003.12:73563014::ATATATATATA… NC_000003.12:73563014::ATATATATATATATATATATATATATATATA	(self)
11498365932, ss4073812090	NC_000003.12:73563014::ATATATGTATA… NC_000003.12:73563014::ATATATGTATATATA	NC_000003.12:73563014::ATATATGTATA… NC_000003.12:73563014::ATATATGTATATATA	(self)
11498365932	NC_000003.12:73563014::ATATG	NC_000003.12:73563014::ATATG	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1491432587

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1491432587