Name: rs1486985445
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1486985445

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr9:8857626 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.00000 (0/14050, ALFA)
T=0.00000 (0/14050, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PTPRD : Intron Variant
PTPRD-AS1 : 2KB Upstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	14050	C=1.00000	A=0.00000, T=0.00000	1.0	N/A
European	Sub	9690	C=1.0000	A=0.0000, T=0.0000	1.0	N/A
African	Sub	2898	C=1.0000	A=0.0000, T=0.0000	1.0	N/A
African Others	Sub	114	C=1.000	A=0.000, T=0.000	1.0	N/A
African American	Sub	2784	C=1.0000	A=0.0000, T=0.0000	1.0	N/A
Asian	Sub	112	C=1.000	A=0.000, T=0.000	1.0	N/A
East Asian	Sub	86	C=1.00	A=0.00, T=0.00	1.0	N/A
Other Asian	Sub	26	C=1.00	A=0.00, T=0.00	1.0	N/A
Latin American 1	Sub	146	C=1.000	A=0.000, T=0.000	1.0	N/A
Latin American 2	Sub	610	C=1.000	A=0.000, T=0.000	1.0	N/A
South Asian	Sub	98	C=1.00	A=0.00, T=0.00	1.0	N/A
Other	Sub	496	C=1.000	A=0.000, T=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	14050	C=1.00000	A=0.00000, T=0.00000
Allele Frequency Aggregator	European	Sub	9690	C=1.0000	A=0.0000, T=0.0000
Allele Frequency Aggregator	African	Sub	2898	C=1.0000	A=0.0000, T=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	610	C=1.000	A=0.000, T=0.000
Allele Frequency Aggregator	Other	Sub	496	C=1.000	A=0.000, T=0.000
Allele Frequency Aggregator	Latin American 1	Sub	146	C=1.000	A=0.000, T=0.000
Allele Frequency Aggregator	Asian	Sub	112	C=1.000	A=0.000, T=0.000
Allele Frequency Aggregator	South Asian	Sub	98	C=1.00	A=0.00, T=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 9	NC_000009.12:g.8857626C>A
GRCh38.p14 chr 9	NC_000009.12:g.8857626C>T
GRCh37.p13 chr 9	NC_000009.11:g.8857626C>A
GRCh37.p13 chr 9	NC_000009.11:g.8857626C>T
PTPRD RefSeqGene	NG_033963.1:g.1760098G>T
PTPRD RefSeqGene	NG_033963.1:g.1760098G>A

Gene: PTPRD, protein tyrosine phosphatase receptor type D (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PTPRD transcript variant 6	NM_001171025.2:c.-104+12G… NM_001171025.2:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant 7	NM_001377946.1:c.-104+12G… NM_001377946.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant 9	NM_001377958.1:c.-104+12G… NM_001377958.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant 10	NM_001378058.1:c.-104+12G… NM_001378058.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant 1	NM_002839.4:c.-103-123680… NM_002839.4:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant 8	NM_001377947.1:c.-358=	N/A	5 Prime UTR Variant
PTPRD transcript variant 5	NM_001040712.2:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 2	NM_130391.4:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 3	NM_130392.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant 4	NM_130393.3:c.	N/A	Genic Upstream Transcript Variant
PTPRD transcript variant X7	XM_006716817.5:c.-103-123… XM_006716817.5:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X24	XM_006716823.4:c.-103-123… XM_006716823.4:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X27	XM_006716825.5:c.-103-123… XM_006716825.5:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X40	XM_006716827.5:c.-103-123… XM_006716827.5:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X1	XM_017014958.3:c.-103-123… XM_017014958.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X2	XM_017014961.3:c.-103-123… XM_017014961.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X5	XM_017014963.3:c.-103-123… XM_017014963.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X4	XM_017014964.3:c.-103-123… XM_017014964.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X6	XM_017014965.3:c.-103-123… XM_017014965.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X8	XM_017014966.3:c.-103-123… XM_017014966.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X9	XM_017014967.3:c.-103-123… XM_017014967.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X10	XM_017014968.3:c.-103-123… XM_017014968.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X13	XM_017014969.3:c.-103-123… XM_017014969.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X12	XM_017014970.3:c.-103-123… XM_017014970.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X15	XM_017014971.3:c.-103-123… XM_017014971.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X16	XM_017014972.3:c.-103-123… XM_017014972.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X17	XM_017014974.3:c.-103-123… XM_017014974.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X20	XM_017014976.3:c.-103-123… XM_017014976.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X19	XM_017014977.3:c.-103-123… XM_017014977.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X22	XM_017014978.3:c.-103-123… XM_017014978.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X23	XM_017014979.3:c.-103-123… XM_017014979.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X33	XM_017014980.3:c.-103-123… XM_017014980.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X44	XM_017014982.3:c.-103-123… XM_017014982.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X45	XM_017014983.3:c.-103-123… XM_017014983.3:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X14	XM_024447625.2:c.-103-123… XM_024447625.2:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X3	XM_047423641.1:c.-103-123… XM_047423641.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X11	XM_047423642.1:c.-103-123… XM_047423642.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X18	XM_047423643.1:c.-104+12G… XM_047423643.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X21	XM_047423644.1:c.-103-123… XM_047423644.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X25	XM_047423645.1:c.-103-123… XM_047423645.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X26	XM_047423646.1:c.-104+12G… XM_047423646.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X28	XM_047423647.1:c.-103-123… XM_047423647.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X29	XM_047423648.1:c.-104+12G… XM_047423648.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X30	XM_047423649.1:c.-103-123… XM_047423649.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X31	XM_047423650.1:c.-103-123… XM_047423650.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X32	XM_047423651.1:c.-103-123… XM_047423651.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X34	XM_047423652.1:c.-103-123… XM_047423652.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X35	XM_047423653.1:c.-103-123… XM_047423653.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X36	XM_047423654.1:c.-103-123… XM_047423654.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X37	XM_047423655.1:c.-104+12G… XM_047423655.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X38	XM_047423656.1:c.-104+12G… XM_047423656.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X39	XM_047423657.1:c.-103-123… XM_047423657.1:c.-103-123680G>T	N/A	Intron Variant
PTPRD transcript variant X41	XM_047423658.1:c.-104+12G… XM_047423658.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X42	XM_047423659.1:c.-104+12G… XM_047423659.1:c.-104+12G>T	N/A	Intron Variant
PTPRD transcript variant X43	XM_047423660.1:c.-104+12G… XM_047423660.1:c.-104+12G>T	N/A	Intron Variant

Gene: PTPRD-AS1, PTPRD antisense RNA 1 (plus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
PTPRD-AS1 transcript variant 1	NR_121599.1:n.	N/A	Upstream Transcript Variant
PTPRD-AS1 transcript variant 2	NR_121600.1:n.	N/A	Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	T
GRCh38.p14 chr 9	NC_000009.12:g.8857626=	NC_000009.12:g.8857626C>A	NC_000009.12:g.8857626C>T
GRCh37.p13 chr 9	NC_000009.11:g.8857626=	NC_000009.11:g.8857626C>A	NC_000009.11:g.8857626C>T
PTPRD RefSeqGene	NG_033963.1:g.1760098=	NG_033963.1:g.1760098G>T	NG_033963.1:g.1760098G>A
PTPRD transcript variant 8	NM_001377947.1:c.-358=	NM_001377947.1:c.-358G>T	NM_001377947.1:c.-358G>A
PTPRD transcript variant 6	NM_001171025.2:c.-104+12=	NM_001171025.2:c.-104+12G>T	NM_001171025.2:c.-104+12G>A
PTPRD transcript variant 7	NM_001377946.1:c.-104+12=	NM_001377946.1:c.-104+12G>T	NM_001377946.1:c.-104+12G>A
PTPRD transcript variant 9	NM_001377958.1:c.-104+12=	NM_001377958.1:c.-104+12G>T	NM_001377958.1:c.-104+12G>A
PTPRD transcript variant 10	NM_001378058.1:c.-104+12=	NM_001378058.1:c.-104+12G>T	NM_001378058.1:c.-104+12G>A
PTPRD transcript variant 1	NM_002839.3:c.-103-123680=	NM_002839.3:c.-103-123680G>T	NM_002839.3:c.-103-123680G>A
PTPRD transcript variant 1	NM_002839.4:c.-103-123680=	NM_002839.4:c.-103-123680G>T	NM_002839.4:c.-103-123680G>A
PTPRD transcript variant X1	XM_005251529.1:c.-103-123680=	XM_005251529.1:c.-103-123680G>T	XM_005251529.1:c.-103-123680G>A
PTPRD transcript variant X2	XM_005251530.1:c.-104+12=	XM_005251530.1:c.-104+12G>T	XM_005251530.1:c.-104+12G>A
PTPRD transcript variant X5	XM_005251533.1:c.-103-123680=	XM_005251533.1:c.-103-123680G>T	XM_005251533.1:c.-103-123680G>A
PTPRD transcript variant X7	XM_006716817.5:c.-103-123680=	XM_006716817.5:c.-103-123680G>T	XM_006716817.5:c.-103-123680G>A
PTPRD transcript variant X24	XM_006716823.4:c.-103-123680=	XM_006716823.4:c.-103-123680G>T	XM_006716823.4:c.-103-123680G>A
PTPRD transcript variant X27	XM_006716825.5:c.-103-123680=	XM_006716825.5:c.-103-123680G>T	XM_006716825.5:c.-103-123680G>A
PTPRD transcript variant X40	XM_006716827.5:c.-103-123680=	XM_006716827.5:c.-103-123680G>T	XM_006716827.5:c.-103-123680G>A
PTPRD transcript variant X1	XM_017014958.3:c.-103-123680=	XM_017014958.3:c.-103-123680G>T	XM_017014958.3:c.-103-123680G>A
PTPRD transcript variant X2	XM_017014961.3:c.-103-123680=	XM_017014961.3:c.-103-123680G>T	XM_017014961.3:c.-103-123680G>A
PTPRD transcript variant X5	XM_017014963.3:c.-103-123680=	XM_017014963.3:c.-103-123680G>T	XM_017014963.3:c.-103-123680G>A
PTPRD transcript variant X4	XM_017014964.3:c.-103-123680=	XM_017014964.3:c.-103-123680G>T	XM_017014964.3:c.-103-123680G>A
PTPRD transcript variant X6	XM_017014965.3:c.-103-123680=	XM_017014965.3:c.-103-123680G>T	XM_017014965.3:c.-103-123680G>A
PTPRD transcript variant X8	XM_017014966.3:c.-103-123680=	XM_017014966.3:c.-103-123680G>T	XM_017014966.3:c.-103-123680G>A
PTPRD transcript variant X9	XM_017014967.3:c.-103-123680=	XM_017014967.3:c.-103-123680G>T	XM_017014967.3:c.-103-123680G>A
PTPRD transcript variant X10	XM_017014968.3:c.-103-123680=	XM_017014968.3:c.-103-123680G>T	XM_017014968.3:c.-103-123680G>A
PTPRD transcript variant X13	XM_017014969.3:c.-103-123680=	XM_017014969.3:c.-103-123680G>T	XM_017014969.3:c.-103-123680G>A
PTPRD transcript variant X12	XM_017014970.3:c.-103-123680=	XM_017014970.3:c.-103-123680G>T	XM_017014970.3:c.-103-123680G>A
PTPRD transcript variant X15	XM_017014971.3:c.-103-123680=	XM_017014971.3:c.-103-123680G>T	XM_017014971.3:c.-103-123680G>A
PTPRD transcript variant X16	XM_017014972.3:c.-103-123680=	XM_017014972.3:c.-103-123680G>T	XM_017014972.3:c.-103-123680G>A
PTPRD transcript variant X17	XM_017014974.3:c.-103-123680=	XM_017014974.3:c.-103-123680G>T	XM_017014974.3:c.-103-123680G>A
PTPRD transcript variant X20	XM_017014976.3:c.-103-123680=	XM_017014976.3:c.-103-123680G>T	XM_017014976.3:c.-103-123680G>A
PTPRD transcript variant X19	XM_017014977.3:c.-103-123680=	XM_017014977.3:c.-103-123680G>T	XM_017014977.3:c.-103-123680G>A
PTPRD transcript variant X22	XM_017014978.3:c.-103-123680=	XM_017014978.3:c.-103-123680G>T	XM_017014978.3:c.-103-123680G>A
PTPRD transcript variant X23	XM_017014979.3:c.-103-123680=	XM_017014979.3:c.-103-123680G>T	XM_017014979.3:c.-103-123680G>A
PTPRD transcript variant X33	XM_017014980.3:c.-103-123680=	XM_017014980.3:c.-103-123680G>T	XM_017014980.3:c.-103-123680G>A
PTPRD transcript variant X44	XM_017014982.3:c.-103-123680=	XM_017014982.3:c.-103-123680G>T	XM_017014982.3:c.-103-123680G>A
PTPRD transcript variant X45	XM_017014983.3:c.-103-123680=	XM_017014983.3:c.-103-123680G>T	XM_017014983.3:c.-103-123680G>A
PTPRD transcript variant X14	XM_024447625.2:c.-103-123680=	XM_024447625.2:c.-103-123680G>T	XM_024447625.2:c.-103-123680G>A
PTPRD transcript variant X3	XM_047423641.1:c.-103-123680=	XM_047423641.1:c.-103-123680G>T	XM_047423641.1:c.-103-123680G>A
PTPRD transcript variant X11	XM_047423642.1:c.-103-123680=	XM_047423642.1:c.-103-123680G>T	XM_047423642.1:c.-103-123680G>A
PTPRD transcript variant X18	XM_047423643.1:c.-104+12=	XM_047423643.1:c.-104+12G>T	XM_047423643.1:c.-104+12G>A
PTPRD transcript variant X21	XM_047423644.1:c.-103-123680=	XM_047423644.1:c.-103-123680G>T	XM_047423644.1:c.-103-123680G>A
PTPRD transcript variant X25	XM_047423645.1:c.-103-123680=	XM_047423645.1:c.-103-123680G>T	XM_047423645.1:c.-103-123680G>A
PTPRD transcript variant X26	XM_047423646.1:c.-104+12=	XM_047423646.1:c.-104+12G>T	XM_047423646.1:c.-104+12G>A
PTPRD transcript variant X28	XM_047423647.1:c.-103-123680=	XM_047423647.1:c.-103-123680G>T	XM_047423647.1:c.-103-123680G>A
PTPRD transcript variant X29	XM_047423648.1:c.-104+12=	XM_047423648.1:c.-104+12G>T	XM_047423648.1:c.-104+12G>A
PTPRD transcript variant X30	XM_047423649.1:c.-103-123680=	XM_047423649.1:c.-103-123680G>T	XM_047423649.1:c.-103-123680G>A
PTPRD transcript variant X31	XM_047423650.1:c.-103-123680=	XM_047423650.1:c.-103-123680G>T	XM_047423650.1:c.-103-123680G>A
PTPRD transcript variant X32	XM_047423651.1:c.-103-123680=	XM_047423651.1:c.-103-123680G>T	XM_047423651.1:c.-103-123680G>A
PTPRD transcript variant X34	XM_047423652.1:c.-103-123680=	XM_047423652.1:c.-103-123680G>T	XM_047423652.1:c.-103-123680G>A
PTPRD transcript variant X35	XM_047423653.1:c.-103-123680=	XM_047423653.1:c.-103-123680G>T	XM_047423653.1:c.-103-123680G>A
PTPRD transcript variant X36	XM_047423654.1:c.-103-123680=	XM_047423654.1:c.-103-123680G>T	XM_047423654.1:c.-103-123680G>A
PTPRD transcript variant X37	XM_047423655.1:c.-104+12=	XM_047423655.1:c.-104+12G>T	XM_047423655.1:c.-104+12G>A
PTPRD transcript variant X38	XM_047423656.1:c.-104+12=	XM_047423656.1:c.-104+12G>T	XM_047423656.1:c.-104+12G>A
PTPRD transcript variant X39	XM_047423657.1:c.-103-123680=	XM_047423657.1:c.-103-123680G>T	XM_047423657.1:c.-103-123680G>A
PTPRD transcript variant X41	XM_047423658.1:c.-104+12=	XM_047423658.1:c.-104+12G>T	XM_047423658.1:c.-104+12G>A
PTPRD transcript variant X42	XM_047423659.1:c.-104+12=	XM_047423659.1:c.-104+12G>T	XM_047423659.1:c.-104+12G>A
PTPRD transcript variant X43	XM_047423660.1:c.-104+12=	XM_047423660.1:c.-104+12G>T	XM_047423660.1:c.-104+12G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

3 SubSNP, 5 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GNOMAD	ss2875192932	Nov 08, 2017 (151)
2	TOPMED	ss4811829759	Apr 27, 2021 (155)
3	TOPMED	ss4811829760	Apr 27, 2021 (155)
4	gnomAD - Genomes Submission ignored due to conflicting rows: Row 317499604 (NC_000009.12:8857625:C:A 1/140210) Row 317499605 (NC_000009.12:8857625:C:T 1/140210)	-	Apr 27, 2021 (155)
5	gnomAD - Genomes Submission ignored due to conflicting rows: Row 317499604 (NC_000009.12:8857625:C:A 1/140210) Row 317499605 (NC_000009.12:8857625:C:T 1/140210)	-	Apr 27, 2021 (155)
6	TopMed Submission ignored due to conflicting rows: Row 649207320 (NC_000009.12:8857625:C:A 4/264690) Row 649207321 (NC_000009.12:8857625:C:T 3/264690)	-	Apr 27, 2021 (155)
7	TopMed Submission ignored due to conflicting rows: Row 649207320 (NC_000009.12:8857625:C:A 4/264690) Row 649207321 (NC_000009.12:8857625:C:T 3/264690)	-	Apr 27, 2021 (155)
8	ALFA	NC_000009.12 - 8857626	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2875192932	NC_000009.11:8857625:C:A	NC_000009.12:8857625:C:A	(self)
5564404562, ss4811829759	NC_000009.12:8857625:C:A	NC_000009.12:8857625:C:A	(self)
5564404562, ss4811829760	NC_000009.12:8857625:C:T	NC_000009.12:8857625:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1486985445

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1486985445