Name: rs143433547
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs143433547

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:151458250-151458262 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTA / dupTA / dupTATA
Variation Type: Indel Insertion and Deletion
Frequency: dupTA=0.08921 (2521/28258, 14KJPN)
dupTA=0.08980 (1505/16760, 8.3KJPN)
dupTA=0.12734 (1521/11944, ALFA) (+ 4 more)
dupTA=0.1400 (701/5008, 1000G)
dupTA=0.0666 (122/1832, Korea1K)
dupTA=0.288 (173/600, NorthernSweden)
dupTA=0.42 (17/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC36A1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	11944	ATATATATATATA=0.87266	ATATATATATA=0.00000, ATATATATATATATA=0.12734, ATATATATATATATATA=0.00000	0.789015	0.043704	0.167281	32
European	Sub	8804	ATATATATATATA=0.8275	ATATATATATA=0.0000, ATATATATATATATA=0.1725, ATATATATATATATATA=0.0000	0.713994	0.059064	0.226942	32
African	Sub	2116	ATATATATATATA=1.0000	ATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	86	ATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
African American	Sub	2030	ATATATATATATA=1.0000	ATATATATATA=0.0000, ATATATATATATATA=0.0000, ATATATATATATATATA=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	104	ATATATATATATA=1.000	ATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATA=0.000	1.0	0.0	0.0	N/A
East Asian	Sub	80	ATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	ATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	96	ATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	436	ATATATATATATA=1.000	ATATATATATA=0.000, ATATATATATATATA=0.000, ATATATATATATATATA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	64	ATATATATATATA=1.00	ATATATATATA=0.00, ATATATATATATATA=0.00, ATATATATATATATATA=0.00	1.0	0.0	0.0	N/A
Other	Sub	324	ATATATATATATA=0.994	ATATATATATA=0.000, ATATATATATATATA=0.006, ATATATATATATATATA=0.000	0.993827	0.006173	0.0	32

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
14KJPN	JAPANESE	Study-wide	28258	- No frequency provided	dupTA=0.08921
8.3KJPN	JAPANESE	Study-wide	16760	- No frequency provided	dupTA=0.08980
Allele Frequency Aggregator	Total	Global	11944	(AT)₆A=0.87266	delTA=0.00000, dupTA=0.12734, dupTATA=0.00000
Allele Frequency Aggregator	European	Sub	8804	(AT)₆A=0.8275	delTA=0.0000, dupTA=0.1725, dupTATA=0.0000
Allele Frequency Aggregator	African	Sub	2116	(AT)₆A=1.0000	delTA=0.0000, dupTA=0.0000, dupTATA=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	436	(AT)₆A=1.000	delTA=0.000, dupTA=0.000, dupTATA=0.000
Allele Frequency Aggregator	Other	Sub	324	(AT)₆A=0.994	delTA=0.000, dupTA=0.006, dupTATA=0.000
Allele Frequency Aggregator	Asian	Sub	104	(AT)₆A=1.000	delTA=0.000, dupTA=0.000, dupTATA=0.000
Allele Frequency Aggregator	Latin American 1	Sub	96	(AT)₆A=1.00	delTA=0.00, dupTA=0.00, dupTATA=0.00
Allele Frequency Aggregator	South Asian	Sub	64	(AT)₆A=1.00	delTA=0.00, dupTA=0.00, dupTATA=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupTA=0.1400
1000Genomes	African	Sub	1322	- No frequency provided	dupTA=0.1331
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupTA=0.0367
1000Genomes	Europe	Sub	1006	- No frequency provided	dupTA=0.2356
1000Genomes	South Asian	Sub	978	- No frequency provided	dupTA=0.141
1000Genomes	American	Sub	694	- No frequency provided	dupTA=0.163
Korean Genome Project	KOREAN	Study-wide	1832	- No frequency provided	dupTA=0.0666
Northern Sweden	ACPOP	Study-wide	600	- No frequency provided	dupTA=0.288
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupTA=0.42

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.151458251TA[5]
GRCh38.p14 chr 5	NC_000005.10:g.151458251TA[7]
GRCh38.p14 chr 5	NC_000005.10:g.151458251TA[8]
GRCh37.p13 chr 5	NC_000005.9:g.150837812TA[5]
GRCh37.p13 chr 5	NC_000005.9:g.150837812TA[7]
GRCh37.p13 chr 5	NC_000005.9:g.150837812TA[8]

Gene: SLC36A1, solute carrier family 36 member 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC36A1 transcript variant 2	NM_001308150.2:c.-5-538AT… NM_001308150.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant 3	NM_001308151.2:c.-5-538AT… NM_001308151.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant 4	NM_001349740.2:c.-148-538… NM_001349740.2:c.-148-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant 1	NM_078483.4:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X2	XM_011537580.3:c.14-538AT… XM_011537580.3:c.14-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X3	XM_011537581.2:c.-5-538AT… XM_011537581.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X10	XM_011537584.3:c.-5-538AT… XM_011537584.3:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X5	XM_011537585.1:c.-5-538AT… XM_011537585.1:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X6	XM_011537586.3:c.-5-538AT… XM_011537586.3:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X21	XM_011537587.4:c.-5-538AT… XM_011537587.4:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X7	XM_011537589.4:c.-5-538AT… XM_011537589.4:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X9	XM_011537590.2:c.-5-538AT… XM_011537590.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X11	XM_011537591.2:c.-5-538AT… XM_011537591.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X12	XM_011537592.3:c.-5-538AT… XM_011537592.3:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X13	XM_017009216.2:c.-5-538AT… XM_017009216.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X18	XM_017009217.2:c.-5-538AT… XM_017009217.2:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X4	XM_047416921.1:c.-5-538AT… XM_047416921.1:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X8	XM_047416923.1:c.-5-538AT… XM_047416923.1:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X14	XM_047416924.1:c.-5-538AT… XM_047416924.1:c.-5-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X19	XM_047416928.1:c.14-538AT… XM_047416928.1:c.14-538AT[5]	N/A	Intron Variant
SLC36A1 transcript variant X1	XM_047416920.1:c.-450_-43… XM_047416920.1:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X15	XM_047416925.1:c.-450_-43… XM_047416925.1:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X16	XM_011537595.3:c.-450_-43… XM_011537595.3:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X17	XM_047416927.1:c.-450_-43… XM_047416927.1:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X22	XM_011537596.3:c.-450_-43… XM_011537596.3:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X23	XM_047416929.1:c.-450_-43… XM_047416929.1:c.-450_-438=	N/A	5 Prime UTR Variant
SLC36A1 transcript variant X20	XM_006714759.5:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AT)₆A=	delTA	dupTA	dupTATA
GRCh38.p14 chr 5	NC_000005.10:g.151458250_151458262=	NC_000005.10:g.151458251TA[5]	NC_000005.10:g.151458251TA[7]	NC_000005.10:g.151458251TA[8]
GRCh37.p13 chr 5	NC_000005.9:g.150837811_150837823=	NC_000005.9:g.150837812TA[5]	NC_000005.9:g.150837812TA[7]	NC_000005.9:g.150837812TA[8]
SLC36A1 transcript variant X16	XM_011537595.3:c.-450_-438=	XM_011537595.3:c.-449TA[5]	XM_011537595.3:c.-449TA[7]	XM_011537595.3:c.-449TA[8]
SLC36A1 transcript variant X22	XM_011537596.3:c.-450_-438=	XM_011537596.3:c.-449TA[5]	XM_011537596.3:c.-449TA[7]	XM_011537596.3:c.-449TA[8]
SLC36A1 transcript variant X17	XM_047416927.1:c.-450_-438=	XM_047416927.1:c.-449TA[5]	XM_047416927.1:c.-449TA[7]	XM_047416927.1:c.-449TA[8]
SLC36A1 transcript variant X1	XM_047416920.1:c.-450_-438=	XM_047416920.1:c.-449TA[5]	XM_047416920.1:c.-449TA[7]	XM_047416920.1:c.-449TA[8]
SLC36A1 transcript variant X15	XM_047416925.1:c.-450_-438=	XM_047416925.1:c.-449TA[5]	XM_047416925.1:c.-449TA[7]	XM_047416925.1:c.-449TA[8]
SLC36A1 transcript variant X23	XM_047416929.1:c.-450_-438=	XM_047416929.1:c.-449TA[5]	XM_047416929.1:c.-449TA[7]	XM_047416929.1:c.-449TA[8]
SLC36A1 transcript variant 2	NM_001308150.2:c.-5-538=	NM_001308150.2:c.-5-538AT[5]	NM_001308150.2:c.-5-538AT[7]	NM_001308150.2:c.-5-538AT[8]
SLC36A1 transcript variant 3	NM_001308151.2:c.-5-538=	NM_001308151.2:c.-5-538AT[5]	NM_001308151.2:c.-5-538AT[7]	NM_001308151.2:c.-5-538AT[8]
SLC36A1 transcript variant 4	NM_001349740.2:c.-148-538=	NM_001349740.2:c.-148-538AT[5]	NM_001349740.2:c.-148-538AT[7]	NM_001349740.2:c.-148-538AT[8]
SLC36A1 transcript	NM_078483.2:c.-5-538=	NM_078483.2:c.-5-538AT[5]	NM_078483.2:c.-5-538AT[7]	NM_078483.2:c.-5-538AT[8]
SLC36A1 transcript variant 1	NM_078483.4:c.-5-538=	NM_078483.4:c.-5-538AT[5]	NM_078483.4:c.-5-538AT[7]	NM_078483.4:c.-5-538AT[8]
SLC36A1 transcript variant X7	XM_005268386.1:c.-5-538=	XM_005268386.1:c.-5-538AT[5]	XM_005268386.1:c.-5-538AT[7]	XM_005268386.1:c.-5-538AT[8]
SLC36A1 transcript variant X2	XM_005268387.1:c.-5-538=	XM_005268387.1:c.-5-538AT[5]	XM_005268387.1:c.-5-538AT[7]	XM_005268387.1:c.-5-538AT[8]
SLC36A1 transcript variant X3	XM_005268388.1:c.-5-538=	XM_005268388.1:c.-5-538AT[5]	XM_005268388.1:c.-5-538AT[7]	XM_005268388.1:c.-5-538AT[8]
SLC36A1 transcript variant X2	XM_011537580.3:c.14-538=	XM_011537580.3:c.14-538AT[5]	XM_011537580.3:c.14-538AT[7]	XM_011537580.3:c.14-538AT[8]
SLC36A1 transcript variant X3	XM_011537581.2:c.-5-538=	XM_011537581.2:c.-5-538AT[5]	XM_011537581.2:c.-5-538AT[7]	XM_011537581.2:c.-5-538AT[8]
SLC36A1 transcript variant X10	XM_011537584.3:c.-5-538=	XM_011537584.3:c.-5-538AT[5]	XM_011537584.3:c.-5-538AT[7]	XM_011537584.3:c.-5-538AT[8]
SLC36A1 transcript variant X5	XM_011537585.1:c.-5-538=	XM_011537585.1:c.-5-538AT[5]	XM_011537585.1:c.-5-538AT[7]	XM_011537585.1:c.-5-538AT[8]
SLC36A1 transcript variant X6	XM_011537586.3:c.-5-538=	XM_011537586.3:c.-5-538AT[5]	XM_011537586.3:c.-5-538AT[7]	XM_011537586.3:c.-5-538AT[8]
SLC36A1 transcript variant X21	XM_011537587.4:c.-5-538=	XM_011537587.4:c.-5-538AT[5]	XM_011537587.4:c.-5-538AT[7]	XM_011537587.4:c.-5-538AT[8]
SLC36A1 transcript variant X7	XM_011537589.4:c.-5-538=	XM_011537589.4:c.-5-538AT[5]	XM_011537589.4:c.-5-538AT[7]	XM_011537589.4:c.-5-538AT[8]
SLC36A1 transcript variant X9	XM_011537590.2:c.-5-538=	XM_011537590.2:c.-5-538AT[5]	XM_011537590.2:c.-5-538AT[7]	XM_011537590.2:c.-5-538AT[8]
SLC36A1 transcript variant X11	XM_011537591.2:c.-5-538=	XM_011537591.2:c.-5-538AT[5]	XM_011537591.2:c.-5-538AT[7]	XM_011537591.2:c.-5-538AT[8]
SLC36A1 transcript variant X12	XM_011537592.3:c.-5-538=	XM_011537592.3:c.-5-538AT[5]	XM_011537592.3:c.-5-538AT[7]	XM_011537592.3:c.-5-538AT[8]
SLC36A1 transcript variant X13	XM_017009216.2:c.-5-538=	XM_017009216.2:c.-5-538AT[5]	XM_017009216.2:c.-5-538AT[7]	XM_017009216.2:c.-5-538AT[8]
SLC36A1 transcript variant X18	XM_017009217.2:c.-5-538=	XM_017009217.2:c.-5-538AT[5]	XM_017009217.2:c.-5-538AT[7]	XM_017009217.2:c.-5-538AT[8]
SLC36A1 transcript variant X4	XM_047416921.1:c.-5-538=	XM_047416921.1:c.-5-538AT[5]	XM_047416921.1:c.-5-538AT[7]	XM_047416921.1:c.-5-538AT[8]
SLC36A1 transcript variant X8	XM_047416923.1:c.-5-538=	XM_047416923.1:c.-5-538AT[5]	XM_047416923.1:c.-5-538AT[7]	XM_047416923.1:c.-5-538AT[8]
SLC36A1 transcript variant X14	XM_047416924.1:c.-5-538=	XM_047416924.1:c.-5-538AT[5]	XM_047416924.1:c.-5-538AT[7]	XM_047416924.1:c.-5-538AT[8]
SLC36A1 transcript variant X19	XM_047416928.1:c.14-538=	XM_047416928.1:c.14-538AT[5]	XM_047416928.1:c.14-538AT[7]	XM_047416928.1:c.14-538AT[8]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

40 SubSNP, 14 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss288665938	May 04, 2012 (137)
2	1000GENOMES	ss326777906	May 09, 2011 (134)
3	1000GENOMES	ss327009814	May 09, 2011 (134)
4	LUNTER	ss551555426	Apr 25, 2013 (138)
5	LUNTER	ss551728433	Apr 25, 2013 (138)
6	SSMP	ss663571303	Apr 01, 2015 (144)
7	BILGI_BIOE	ss666332417	Apr 25, 2013 (138)
8	1000GENOMES	ss1374679616	Aug 21, 2014 (142)
9	EVA_GENOME_DK	ss1576633945	Apr 01, 2015 (144)
10	EVA_UK10K_ALSPAC	ss1704921673	Jan 10, 2018 (151)
11	EVA_UK10K_TWINSUK	ss1704922120	Jan 10, 2018 (151)
12	EVA_UK10K_TWINSUK	ss1710237354	Apr 01, 2015 (144)
13	EVA_UK10K_ALSPAC	ss1710237357	Apr 01, 2015 (144)
14	SWEGEN	ss2998012471	Nov 08, 2017 (151)
15	SWEGEN	ss2998012472	Nov 08, 2017 (151)
16	MCHAISSO	ss3066048987	Nov 08, 2017 (151)
17	BIOINF_KMB_FNS_UNIBA	ss3645914594	Oct 12, 2018 (152)
18	EVA_DECODE	ss3715968602	Jul 13, 2019 (153)
19	EVA_DECODE	ss3715968603	Jul 13, 2019 (153)
20	EVA_DECODE	ss3715968604	Jul 13, 2019 (153)
21	ACPOP	ss3732932401	Jul 13, 2019 (153)
22	PACBIO	ss3785285565	Jul 13, 2019 (153)
23	PACBIO	ss3790662757	Jul 13, 2019 (153)
24	PACBIO	ss3795539807	Jul 13, 2019 (153)
25	KHV_HUMAN_GENOMES	ss3807399899	Jul 13, 2019 (153)
26	EVA	ss3829571379	Apr 26, 2020 (154)
27	EVA	ss3838258780	Apr 26, 2020 (154)
28	EVA	ss3843701919	Apr 26, 2020 (154)
29	KOGIC	ss3957909246	Apr 26, 2020 (154)
30	GNOMAD	ss4131778877	Apr 26, 2021 (155)
31	GNOMAD	ss4131778878	Apr 26, 2021 (155)
32	GNOMAD	ss4131778879	Apr 26, 2021 (155)
33	TOMMO_GENOMICS	ss5174766734	Apr 26, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5266325268	Oct 13, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5266325269	Oct 13, 2022 (156)
36	HUGCELL_USP	ss5464241815	Oct 13, 2022 (156)
37	TOMMO_GENOMICS	ss5712027060	Oct 13, 2022 (156)
38	YY_MCH	ss5806882402	Oct 13, 2022 (156)
39	EVA	ss5835828031	Oct 13, 2022 (156)
40	EVA	ss5835828032	Oct 13, 2022 (156)
41	1000Genomes	NC_000005.9 - 150837811	Oct 12, 2018 (152)
42	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 16396765 (NC_000005.9:150837810:AT: 42/3854) Row 16396766 (NC_000005.9:150837810::AT 1029/3854)	-	Oct 12, 2018 (152)
43	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 16396765 (NC_000005.9:150837810:AT: 42/3854) Row 16396766 (NC_000005.9:150837810::AT 1029/3854)	-	Oct 12, 2018 (152)
44	The Danish reference pan genome	NC_000005.9 - 150837811	Apr 26, 2020 (154)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 208412061 (NC_000005.10:151458249::AT 28262/133972) Row 208412062 (NC_000005.10:151458249::ATAT 20/134090) Row 208412063 (NC_000005.10:151458249:AT: 8/134068)	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 208412061 (NC_000005.10:151458249::AT 28262/133972) Row 208412062 (NC_000005.10:151458249::ATAT 20/134090) Row 208412063 (NC_000005.10:151458249:AT: 8/134068)	-	Apr 26, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 208412061 (NC_000005.10:151458249::AT 28262/133972) Row 208412062 (NC_000005.10:151458249::ATAT 20/134090) Row 208412063 (NC_000005.10:151458249:AT: 8/134068)	-	Apr 26, 2021 (155)
48	Korean Genome Project	NC_000005.10 - 151458250	Apr 26, 2020 (154)
49	Northern Sweden	NC_000005.9 - 150837811	Jul 13, 2019 (153)
50	8.3KJPN	NC_000005.9 - 150837811	Apr 26, 2021 (155)
51	14KJPN	NC_000005.10 - 151458250	Oct 13, 2022 (156)
52	UK 10K study - Twins Submission ignored due to conflicting rows: Row 16396765 (NC_000005.9:150837810:AT: 28/3708) Row 16396766 (NC_000005.9:150837810::AT 915/3708)	-	Oct 12, 2018 (152)
53	UK 10K study - Twins Submission ignored due to conflicting rows: Row 16396765 (NC_000005.9:150837810:AT: 28/3708) Row 16396766 (NC_000005.9:150837810::AT 915/3708)	-	Oct 12, 2018 (152)
54	ALFA	NC_000005.10 - 151458250	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs369214202	May 15, 2013 (138)
rs796382406	Nov 08, 2017 (151)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss1704921673, ss1704922120, ss5835828032	NC_000005.9:150837810:AT:	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATA	(self)
ss3715968604, ss4131778879	NC_000005.10:151458249:AT:	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATA	(self)
13650672743	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATA	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATA	(self)
ss326777906, ss327009814, ss551555426, ss551728433	NC_000005.8:150818003::AT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
ss288665938	NC_000005.8:150818016::TA	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
29466562, 1035795, 6217266, 32736041, ss663571303, ss666332417, ss1374679616, ss1576633945, ss2998012471, ss3732932401, ss3785285565, ss3790662757, ss3795539807, ss3829571379, ss3838258780, ss5174766734, ss5835828031	NC_000005.9:150837810::AT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
ss1710237354, ss1710237357	NC_000005.9:150837812::AT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
14287247, 45864164, ss3066048987, ss3645914594, ss3807399899, ss3843701919, ss3957909246, ss4131778877, ss5266325268, ss5464241815, ss5712027060, ss5806882402	NC_000005.10:151458249::AT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
13650672743	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
ss3715968603	NC_000005.10:151458251::AT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATA	(self)
ss2998012472	NC_000005.9:150837810::ATAT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATATA	(self)
ss4131778878, ss5266325269	NC_000005.10:151458249::ATAT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATATA	(self)
13650672743	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATATA	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATATA	(self)
ss3715968602	NC_000005.10:151458251::ATAT	NC_000005.10:151458249:ATATATATATA… NC_000005.10:151458249:ATATATATATATA:ATATATATATATATATA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs143433547

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs143433547