Name: rs142677050
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs142677050

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr13:106532823-106532832 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delGG / delG / dupG / dupGG / dupG…
delGG / delG / dupG / dupGG / dupGGG
Variation Type: Indel Insertion and Deletion
Frequency: delGG=0.000004 (1/264690, TOPMED)
dupG=0.08442 (1011/11976, ALFA)
dupG=0.0759 (380/5008, 1000G) (+ 2 more)
dupG=0.2263 (1009/4458, Estonian)
dupG=0.12 (5/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: EFNB2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	11976	GGGGGGGGGG=0.91491	GGGGGGGG=0.00000, GGGGGGGGG=0.00025, GGGGGGGGGGG=0.08442, GGGGGGGGGGGG=0.00042, GGGGGGGGGGGGG=0.00000	0.853679	0.022241	0.12408	32
European	Sub	9418	GGGGGGGGGG=0.8920	GGGGGGGG=0.0000, GGGGGGGGG=0.0003, GGGGGGGGGGG=0.1071, GGGGGGGGGGGG=0.0005, GGGGGGGGGGGGG=0.0000	0.814295	0.028292	0.157413	32
African	Sub	1844	GGGGGGGGGG=1.0000	GGGGGGGG=0.0000, GGGGGGGGG=0.0000, GGGGGGGGGGG=0.0000, GGGGGGGGGGGG=0.0000, GGGGGGGGGGGGG=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	68	GGGGGGGGGG=1.00	GGGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
African American	Sub	1776	GGGGGGGGGG=1.0000	GGGGGGGG=0.0000, GGGGGGGGG=0.0000, GGGGGGGGGGG=0.0000, GGGGGGGGGGGG=0.0000, GGGGGGGGGGGGG=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	24	GGGGGGGGGG=1.00	GGGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	14	GGGGGGGGGG=1.00	GGGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	10	GGGGGGGGGG=1.0	GGGGGGGG=0.0, GGGGGGGGG=0.0, GGGGGGGGGGG=0.0, GGGGGGGGGGGG=0.0, GGGGGGGGGGGGG=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	74	GGGGGGGGGG=1.00	GGGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	262	GGGGGGGGGG=1.000	GGGGGGGG=0.000, GGGGGGGGG=0.000, GGGGGGGGGGG=0.000, GGGGGGGGGGGG=0.000, GGGGGGGGGGGGG=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	50	GGGGGGGGGG=1.00	GGGGGGGG=0.00, GGGGGGGGG=0.00, GGGGGGGGGGG=0.00, GGGGGGGGGGGG=0.00, GGGGGGGGGGGGG=0.00	1.0	0.0	0.0	N/A
Other	Sub	304	GGGGGGGGGG=0.993	GGGGGGGG=0.000, GGGGGGGGG=0.000, GGGGGGGGGGG=0.007, GGGGGGGGGGGG=0.000, GGGGGGGGGGGGG=0.000	0.986842	0.0	0.013158	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(G)₁₀=0.999996	delGG=0.000004
Allele Frequency Aggregator	Total	Global	11976	(G)₁₀=0.91491	delGG=0.00000, delG=0.00025, dupG=0.08442, dupGG=0.00042, dupGGG=0.00000
Allele Frequency Aggregator	European	Sub	9418	(G)₁₀=0.8920	delGG=0.0000, delG=0.0003, dupG=0.1071, dupGG=0.0005, dupGGG=0.0000
Allele Frequency Aggregator	African	Sub	1844	(G)₁₀=1.0000	delGG=0.0000, delG=0.0000, dupG=0.0000, dupGG=0.0000, dupGGG=0.0000
Allele Frequency Aggregator	Other	Sub	304	(G)₁₀=0.993	delGG=0.000, delG=0.000, dupG=0.007, dupGG=0.000, dupGGG=0.000
Allele Frequency Aggregator	Latin American 2	Sub	262	(G)₁₀=1.000	delGG=0.000, delG=0.000, dupG=0.000, dupGG=0.000, dupGGG=0.000
Allele Frequency Aggregator	Latin American 1	Sub	74	(G)₁₀=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00
Allele Frequency Aggregator	South Asian	Sub	50	(G)₁₀=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00
Allele Frequency Aggregator	Asian	Sub	24	(G)₁₀=1.00	delGG=0.00, delG=0.00, dupG=0.00, dupGG=0.00, dupGGG=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupG=0.0759
1000Genomes	African	Sub	1322	- No frequency provided	dupG=0.0295
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupG=0.1825
1000Genomes	Europe	Sub	1006	- No frequency provided	dupG=0.0417
1000Genomes	South Asian	Sub	978	- No frequency provided	dupG=0.067
1000Genomes	American	Sub	694	- No frequency provided	dupG=0.071
Genetic variation in the Estonian population	Estonian	Study-wide	4458	- No frequency provided	dupG=0.2263
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupG=0.12

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 13	NC_000013.11:g.106532831_106532832del
GRCh38.p14 chr 13	NC_000013.11:g.106532832del
GRCh38.p14 chr 13	NC_000013.11:g.106532832dup
GRCh38.p14 chr 13	NC_000013.11:g.106532831_106532832dup
GRCh38.p14 chr 13	NC_000013.11:g.106532830_106532832dup
GRCh37.p13 chr 13	NC_000013.10:g.107185179_107185180del
GRCh37.p13 chr 13	NC_000013.10:g.107185180del
GRCh37.p13 chr 13	NC_000013.10:g.107185180dup
GRCh37.p13 chr 13	NC_000013.10:g.107185179_107185180dup
GRCh37.p13 chr 13	NC_000013.10:g.107185178_107185180dup

Gene: EFNB2, ephrin B2 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
EFNB2 transcript variant 2	NM_001372056.1:c.122+2019… NM_001372056.1:c.122+2019_122+2020del	N/A	Intron Variant
EFNB2 transcript variant 3	NM_001372057.1:c.122+2019… NM_001372057.1:c.122+2019_122+2020del	N/A	Intron Variant
EFNB2 transcript variant 4	NM_001372058.1:c.122+2019… NM_001372058.1:c.122+2019_122+2020del	N/A	Intron Variant
EFNB2 transcript variant 1	NM_004093.4:c.122+2019_12… NM_004093.4:c.122+2019_122+2020del	N/A	Intron Variant
EFNB2 transcript variant X1	XM_017020406.3:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(G)₁₀=	delGG	delG	dupG	dupGG	dupGGG
GRCh38.p14 chr 13	NC_000013.11:g.106532823_106532832=	NC_000013.11:g.106532831_106532832del	NC_000013.11:g.106532832del	NC_000013.11:g.106532832dup	NC_000013.11:g.106532831_106532832dup	NC_000013.11:g.106532830_106532832dup
GRCh37.p13 chr 13	NC_000013.10:g.107185171_107185180=	NC_000013.10:g.107185179_107185180del	NC_000013.10:g.107185180del	NC_000013.10:g.107185180dup	NC_000013.10:g.107185179_107185180dup	NC_000013.10:g.107185178_107185180dup
EFNB2 transcript variant 2	NM_001372056.1:c.122+2020=	NM_001372056.1:c.122+2019_122+2020del	NM_001372056.1:c.122+2020del	NM_001372056.1:c.122+2020dup	NM_001372056.1:c.122+2019_122+2020dup	NM_001372056.1:c.122+2018_122+2020dup
EFNB2 transcript variant 3	NM_001372057.1:c.122+2020=	NM_001372057.1:c.122+2019_122+2020del	NM_001372057.1:c.122+2020del	NM_001372057.1:c.122+2020dup	NM_001372057.1:c.122+2019_122+2020dup	NM_001372057.1:c.122+2018_122+2020dup
EFNB2 transcript variant 4	NM_001372058.1:c.122+2020=	NM_001372058.1:c.122+2019_122+2020del	NM_001372058.1:c.122+2020del	NM_001372058.1:c.122+2020dup	NM_001372058.1:c.122+2019_122+2020dup	NM_001372058.1:c.122+2018_122+2020dup
EFNB2 transcript	NM_004093.3:c.122+2020=	NM_004093.3:c.122+2019_122+2020del	NM_004093.3:c.122+2020del	NM_004093.3:c.122+2020dup	NM_004093.3:c.122+2019_122+2020dup	NM_004093.3:c.122+2018_122+2020dup
EFNB2 transcript variant 1	NM_004093.4:c.122+2020=	NM_004093.4:c.122+2019_122+2020del	NM_004093.4:c.122+2020del	NM_004093.4:c.122+2020dup	NM_004093.4:c.122+2019_122+2020dup	NM_004093.4:c.122+2018_122+2020dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

35 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss327571246	May 09, 2011 (134)
2	1000GENOMES	ss327680053	May 09, 2011 (134)
3	LUNTER	ss553536611	Apr 25, 2013 (138)
4	SSMP	ss664158351	Apr 01, 2015 (144)
5	1000GENOMES	ss1373666860	Aug 21, 2014 (142)
6	EVA_GENOME_DK	ss1574705506	Apr 01, 2015 (144)
7	JJLAB	ss2031209969	Sep 14, 2016 (149)
8	SYSTEMSBIOZJU	ss2628422398	Nov 08, 2017 (151)
9	SWEGEN	ss3011673553	Nov 08, 2017 (151)
10	MCHAISSO	ss3063781659	Nov 08, 2017 (151)
11	MCHAISSO	ss3064614982	Nov 08, 2017 (151)
12	EGCUT_WGS	ss3678964700	Jul 13, 2019 (153)
13	EVA_DECODE	ss3696084955	Jul 13, 2019 (153)
14	EVA_DECODE	ss3696084956	Jul 13, 2019 (153)
15	ACPOP	ss3740109773	Jul 13, 2019 (153)
16	ACPOP	ss3740109774	Jul 13, 2019 (153)
17	KHV_HUMAN_GENOMES	ss3817287495	Jul 13, 2019 (153)
18	EVA	ss3833760137	Apr 27, 2020 (154)
19	GNOMAD	ss4272883522	Apr 26, 2021 (155)
20	GNOMAD	ss4272883523	Apr 26, 2021 (155)
21	GNOMAD	ss4272883524	Apr 26, 2021 (155)
22	TOPMED	ss4960559995	Apr 26, 2021 (155)
23	TOMMO_GENOMICS	ss5211791764	Apr 26, 2021 (155)
24	TOMMO_GENOMICS	ss5211791765	Apr 26, 2021 (155)
25	TOMMO_GENOMICS	ss5211791766	Apr 26, 2021 (155)
26	1000G_HIGH_COVERAGE	ss5295126220	Oct 16, 2022 (156)
27	1000G_HIGH_COVERAGE	ss5295126221	Oct 16, 2022 (156)
28	HUGCELL_USP	ss5489351396	Oct 16, 2022 (156)
29	HUGCELL_USP	ss5489351397	Oct 16, 2022 (156)
30	HUGCELL_USP	ss5489351398	Oct 16, 2022 (156)
31	TOMMO_GENOMICS	ss5764159952	Oct 16, 2022 (156)
32	TOMMO_GENOMICS	ss5764159953	Oct 16, 2022 (156)
33	TOMMO_GENOMICS	ss5764159954	Oct 16, 2022 (156)
34	EVA	ss5850904895	Oct 16, 2022 (156)
35	EVA	ss5926702044	Oct 16, 2022 (156)
36	1000Genomes	NC_000013.10 - 107185171	Oct 12, 2018 (152)
37	Genetic variation in the Estonian population	NC_000013.10 - 107185171	Oct 12, 2018 (152)
38	The Danish reference pan genome	NC_000013.10 - 107185171	Apr 27, 2020 (154)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 442429336 (NC_000013.11:106532822::G 25549/127860) Row 442429337 (NC_000013.11:106532822::GG 297/129014) Row 442429338 (NC_000013.11:106532822:G: 164/128888)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 442429336 (NC_000013.11:106532822::G 25549/127860) Row 442429337 (NC_000013.11:106532822::GG 297/129014) Row 442429338 (NC_000013.11:106532822:G: 164/128888)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 442429336 (NC_000013.11:106532822::G 25549/127860) Row 442429337 (NC_000013.11:106532822::GG 297/129014) Row 442429338 (NC_000013.11:106532822:G: 164/128888)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 442429336 (NC_000013.11:106532822::G 25549/127860) Row 442429337 (NC_000013.11:106532822::GG 297/129014) Row 442429338 (NC_000013.11:106532822:G: 164/128888)...	-	Apr 26, 2021 (155)
43	Northern Sweden Submission ignored due to conflicting rows: Row 13394638 (NC_000013.10:107185170::G 99/600) Row 13394639 (NC_000013.10:107185170:G: 2/600)	-	Jul 13, 2019 (153)
44	Northern Sweden Submission ignored due to conflicting rows: Row 13394638 (NC_000013.10:107185170::G 99/600) Row 13394639 (NC_000013.10:107185170:G: 2/600)	-	Jul 13, 2019 (153)
45	8.3KJPN Submission ignored due to conflicting rows: Row 69761071 (NC_000013.10:107185170::G 7871/16756) Row 69761072 (NC_000013.10:107185170:G: 16/16756) Row 69761073 (NC_000013.10:107185170::GG 38/16756)	-	Apr 26, 2021 (155)
46	8.3KJPN Submission ignored due to conflicting rows: Row 69761071 (NC_000013.10:107185170::G 7871/16756) Row 69761072 (NC_000013.10:107185170:G: 16/16756) Row 69761073 (NC_000013.10:107185170::GG 38/16756)	-	Apr 26, 2021 (155)
47	8.3KJPN Submission ignored due to conflicting rows: Row 69761071 (NC_000013.10:107185170::G 7871/16756) Row 69761072 (NC_000013.10:107185170:G: 16/16756) Row 69761073 (NC_000013.10:107185170::GG 38/16756)	-	Apr 26, 2021 (155)
48	14KJPN Submission ignored due to conflicting rows: Row 97997056 (NC_000013.11:106532822::G 13425/28258) Row 97997057 (NC_000013.11:106532822::GG 76/28258) Row 97997058 (NC_000013.11:106532822:G: 14/28258)	-	Oct 16, 2022 (156)
49	14KJPN Submission ignored due to conflicting rows: Row 97997056 (NC_000013.11:106532822::G 13425/28258) Row 97997057 (NC_000013.11:106532822::GG 76/28258) Row 97997058 (NC_000013.11:106532822:G: 14/28258)	-	Oct 16, 2022 (156)
50	14KJPN Submission ignored due to conflicting rows: Row 97997056 (NC_000013.11:106532822::G 13425/28258) Row 97997057 (NC_000013.11:106532822::GG 76/28258) Row 97997058 (NC_000013.11:106532822:G: 14/28258)	-	Oct 16, 2022 (156)
51	TopMed	NC_000013.11 - 106532823	Apr 26, 2021 (155)
52	ALFA	NC_000013.11 - 106532823	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs375907704	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
176105653, ss4272883524, ss4960559995	NC_000013.11:106532822:GG:	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGG	(self)
14939036557	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGG	(self)
ss3740109774, ss5211791765	NC_000013.10:107185170:G:	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGG	(self)
ss3696084956, ss5489351397, ss5764159954	NC_000013.11:106532822:G:	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGG	(self)
14939036557	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGG	(self)
ss327571246, ss327680053, ss553536611	NC_000013.9:105983171::G	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	(self)
62743518, 24702948, 431589, ss664158351, ss1373666860, ss1574705506, ss2031209969, ss2628422398, ss3011673553, ss3678964700, ss3740109773, ss3833760137, ss5211791764	NC_000013.10:107185170::G	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	(self)
ss3063781659, ss3064614982, ss3817287495, ss4272883522, ss5295126220, ss5489351396, ss5764159952, ss5850904895, ss5926702044	NC_000013.11:106532822::G	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	(self)
14939036557	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	(self)
ss3696084955	NC_000013.11:106532823::G	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGG	(self)
ss5211791766	NC_000013.10:107185170::GG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGG	(self)
ss4272883523, ss5295126221, ss5489351398, ss5764159953	NC_000013.11:106532822::GG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGG	(self)
14939036557	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGG	(self)
14939036557	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGGG	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3203165782	NC_000013.11:106532822::GGG	NC_000013.11:106532822:GGGGGGGGGG:… NC_000013.11:106532822:GGGGGGGGGG:GGGGGGGGGGGGG

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs142677050

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs142677050