Name: rs141674306
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs141674306

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:157087701-157087720 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GT)₄ / del(GT)₃ / delGTGT / de…
del(GT)₄ / del(GT)₃ / delGTGT / delGT / dupGT / dupGTGT / dup(GT)₃ / dup(GT)₄ / dup(GT)₅ / dup(GT)₆
Variation Type: Indel Insertion and Deletion
Frequency: del(GT)₃=0.000023 (6/264690, TOPMED)
dupGT=0.02231 (385/17260, ALFA)
dupGT=0.085 (51/600, NorthernSweden) (+ 2 more)
delGTGT=0.254 (31/122, 1000G)
dupGT=0.03 (1/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC00880 : Intron Variant
LINC02029 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	17260	GTGTGTGTGTGTGTGTGTGT=0.97769	GTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGT=0.02231, GTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000	0.95759	0.002202	0.040209	28
European	Sub	13510	GTGTGTGTGTGTGTGTGTGT=0.97158	GTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGT=0.02842, GTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00000	0.945966	0.002813	0.051221	19
African	Sub	2378	GTGTGTGTGTGTGTGTGTGT=1.0000	GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	94	GTGTGTGTGTGTGTGTGTGT=1.00	GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
African American	Sub	2284	GTGTGTGTGTGTGTGTGTGT=1.0000	GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	110	GTGTGTGTGTGTGTGTGTGT=1.000	GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A
East Asian	Sub	86	GTGTGTGTGTGTGTGTGTGT=1.00	GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	GTGTGTGTGTGTGTGTGTGT=1.00	GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	130	GTGTGTGTGTGTGTGTGTGT=1.000	GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	578	GTGTGTGTGTGTGTGTGTGT=1.000	GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	94	GTGTGTGTGTGTGTGTGTGT=1.00	GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	0.0	N/A
Other	Sub	460	GTGTGTGTGTGTGTGTGTGT=0.998	GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.002, GTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT=0.000	0.995652	0.0	0.004348	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(GT)₁₀=0.999977	del(GT)₃=0.000023
Allele Frequency Aggregator	Total	Global	17260	(GT)₁₀=0.97769	del(GT)₄=0.00000, del(GT)₃=0.00000, delGTGT=0.00000, delGT=0.00000, dupGT=0.02231, dupGTGT=0.00000, dup(GT)₃=0.00000, dup(GT)₄=0.00000, dup(GT)₅=0.00000, dup(GT)₆=0.00000
Allele Frequency Aggregator	European	Sub	13510	(GT)₁₀=0.97158	del(GT)₄=0.00000, del(GT)₃=0.00000, delGTGT=0.00000, delGT=0.00000, dupGT=0.02842, dupGTGT=0.00000, dup(GT)₃=0.00000, dup(GT)₄=0.00000, dup(GT)₅=0.00000, dup(GT)₆=0.00000
Allele Frequency Aggregator	African	Sub	2378	(GT)₁₀=1.0000	del(GT)₄=0.0000, del(GT)₃=0.0000, delGTGT=0.0000, delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, dup(GT)₃=0.0000, dup(GT)₄=0.0000, dup(GT)₅=0.0000, dup(GT)₆=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	578	(GT)₁₀=1.000	del(GT)₄=0.000, del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000, dup(GT)₆=0.000
Allele Frequency Aggregator	Other	Sub	460	(GT)₁₀=0.998	del(GT)₄=0.000, del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.002, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000, dup(GT)₆=0.000
Allele Frequency Aggregator	Latin American 1	Sub	130	(GT)₁₀=1.000	del(GT)₄=0.000, del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000, dup(GT)₆=0.000
Allele Frequency Aggregator	Asian	Sub	110	(GT)₁₀=1.000	del(GT)₄=0.000, del(GT)₃=0.000, delGTGT=0.000, delGT=0.000, dupGT=0.000, dupGTGT=0.000, dup(GT)₃=0.000, dup(GT)₄=0.000, dup(GT)₅=0.000, dup(GT)₆=0.000
Allele Frequency Aggregator	South Asian	Sub	94	(GT)₁₀=1.00	del(GT)₄=0.00, del(GT)₃=0.00, delGTGT=0.00, delGT=0.00, dupGT=0.00, dupGTGT=0.00, dup(GT)₃=0.00, dup(GT)₄=0.00, dup(GT)₅=0.00, dup(GT)₆=0.00
Northern Sweden	ACPOP	Study-wide	600	- No frequency provided	dupGT=0.085
1000Genomes	Global	Study-wide	122	(GT)₁₀=0.746	delGTGT=0.254
1000Genomes	African	Sub	116	(GT)₁₀=0.750	delGTGT=0.250
1000Genomes	American	Sub	3	(GT)₁₀=1.0	delGTGT=0.0
1000Genomes	South Asian	Sub	2	(GT)₁₀=0.0	delGTGT=1.0
1000Genomes	Europe	Sub	1	(GT)₁₀=1.0	delGTGT=0.0
1000Genomes	East Asian	Sub	0	(GT)₁₀=0	delGTGT=0
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupGT=0.03

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[6]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[7]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[8]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[9]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[11]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[12]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[13]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[14]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[15]
GRCh38.p14 chr 3	NC_000003.12:g.157087701GT[16]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[6]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[7]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[8]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[9]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[11]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[12]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[13]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[14]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[15]
GRCh37.p13 chr 3	NC_000003.11:g.156805490GT[16]

Gene: LINC00880, long intergenic non-protein coding RNA 880 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC00880 transcript	NR_034007.1:n.	N/A	Intron Variant

Gene: LINC02029, long intergenic non-protein coding RNA 2029 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC02029 transcript	NR_135546.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(GT)₁₀=	del(GT)₄	del(GT)₃	delGTGT	delGT	dupGT	dupGTGT	dup(GT)₃	dup(GT)₄	dup(GT)₅	dup(GT)₆
GRCh38.p14 chr 3	NC_000003.12:g.157087701_157087720=	NC_000003.12:g.157087701GT[6]	NC_000003.12:g.157087701GT[7]	NC_000003.12:g.157087701GT[8]	NC_000003.12:g.157087701GT[9]	NC_000003.12:g.157087701GT[11]	NC_000003.12:g.157087701GT[12]	NC_000003.12:g.157087701GT[13]	NC_000003.12:g.157087701GT[14]	NC_000003.12:g.157087701GT[15]	NC_000003.12:g.157087701GT[16]
GRCh37.p13 chr 3	NC_000003.11:g.156805490_156805509=	NC_000003.11:g.156805490GT[6]	NC_000003.11:g.156805490GT[7]	NC_000003.11:g.156805490GT[8]	NC_000003.11:g.156805490GT[9]	NC_000003.11:g.156805490GT[11]	NC_000003.11:g.156805490GT[12]	NC_000003.11:g.156805490GT[13]	NC_000003.11:g.156805490GT[14]	NC_000003.11:g.156805490GT[15]	NC_000003.11:g.156805490GT[16]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

55 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss326444355	Oct 12, 2018 (152)
2	1000GENOMES	ss326469465	Oct 12, 2018 (152)
3	1000GENOMES	ss326608726	May 09, 2011 (134)
4	LUNTER	ss551297420	Apr 25, 2013 (138)
5	LUNTER	ss551397730	Apr 25, 2013 (138)
6	LUNTER	ss553072432	Oct 12, 2018 (152)
7	TISHKOFF	ss554032626	Apr 25, 2013 (138)
8	SSMP	ss663370443	Apr 01, 2015 (144)
9	SSIP	ss947101131	Aug 21, 2014 (142)
10	1000GENOMES	ss1371208139	Aug 21, 2014 (142)
11	1000GENOMES	ss1371208142	Aug 21, 2014 (142)
12	1000GENOMES	ss1371208145	Aug 21, 2014 (142)
13	1000GENOMES	ss1371208148	Aug 21, 2014 (142)
14	EVA_GENOME_DK	ss1576073405	Apr 01, 2015 (144)
15	EVA_UK10K_ALSPAC	ss1703894165	Oct 12, 2018 (152)
16	EVA_UK10K_TWINSUK	ss1703894190	Oct 12, 2018 (152)
17	EVA_UK10K_ALSPAC	ss1710113514	Apr 01, 2015 (144)
18	EVA_UK10K_TWINSUK	ss1710113521	Apr 01, 2015 (144)
19	JJLAB	ss2030554631	Sep 14, 2016 (149)
20	SWEGEN	ss2993482960	Nov 08, 2017 (151)
21	EVA_DECODE	ss3710634211	Jul 13, 2019 (153)
22	EVA_DECODE	ss3710634212	Jul 13, 2019 (153)
23	EVA_DECODE	ss3710634213	Jul 13, 2019 (153)
24	ACPOP	ss3730505735	Jul 13, 2019 (153)
25	PACBIO	ss3784511533	Jul 13, 2019 (153)
26	PACBIO	ss3789997546	Jul 13, 2019 (153)
27	PACBIO	ss3794872207	Jul 13, 2019 (153)
28	EVA	ss3828164015	Apr 25, 2020 (154)
29	KOGIC	ss3952752982	Apr 25, 2020 (154)
30	KOGIC	ss3952752983	Apr 25, 2020 (154)
31	GNOMAD	ss4083921731	Apr 26, 2021 (155)
32	GNOMAD	ss4083921732	Apr 26, 2021 (155)
33	GNOMAD	ss4083921733	Apr 26, 2021 (155)
34	GNOMAD	ss4083921734	Apr 26, 2021 (155)
35	GNOMAD	ss4083921735	Apr 26, 2021 (155)
36	GNOMAD	ss4083921736	Apr 26, 2021 (155)
37	GNOMAD	ss4083921737	Apr 26, 2021 (155)
38	GNOMAD	ss4083921738	Apr 26, 2021 (155)
39	TOPMED	ss4589864467	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5162387487	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5162387488	Apr 26, 2021 (155)
42	1000G_HIGH_COVERAGE	ss5256649554	Oct 12, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5256649555	Oct 12, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5256649556	Oct 12, 2022 (156)
45	1000G_HIGH_COVERAGE	ss5256649557	Oct 12, 2022 (156)
46	1000G_HIGH_COVERAGE	ss5256649558	Oct 12, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5256649559	Oct 12, 2022 (156)
48	HUGCELL_USP	ss5455729287	Oct 12, 2022 (156)
49	HUGCELL_USP	ss5455729288	Oct 12, 2022 (156)
50	HUGCELL_USP	ss5455729289	Oct 12, 2022 (156)
51	HUGCELL_USP	ss5455729290	Oct 12, 2022 (156)
52	TOMMO_GENOMICS	ss5695497695	Oct 12, 2022 (156)
53	TOMMO_GENOMICS	ss5695497696	Oct 12, 2022 (156)
54	EVA	ss5826720216	Oct 12, 2022 (156)
55	EVA	ss5826720217	Oct 12, 2022 (156)
56	1000Genomes	NC_000003.11 - 156805490	Oct 12, 2018 (152)
57	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 10119529 (NC_000003.11:156805489:GT: 208/3854) Row 10119530 (NC_000003.11:156805489::GT 179/3854)	-	Oct 12, 2018 (152)
58	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 10119529 (NC_000003.11:156805489:GT: 208/3854) Row 10119530 (NC_000003.11:156805489::GT 179/3854)	-	Oct 12, 2018 (152)
59	The Danish reference pan genome	NC_000003.11 - 156805490	Apr 25, 2020 (154)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 129017760 (NC_000003.12:157087700::GT 5552/138398) Row 129017761 (NC_000003.12:157087700::GTGT 403/138438) Row 129017762 (NC_000003.12:157087700::GTGTGTGT 2193/138430)...	-	Apr 26, 2021 (155)
68	Korean Genome Project Submission ignored due to conflicting rows: Row 9130983 (NC_000003.12:157087700:GT: 15/1832) Row 9130984 (NC_000003.12:157087702::GT 6/1832)	-	Apr 25, 2020 (154)
69	Korean Genome Project Submission ignored due to conflicting rows: Row 9130983 (NC_000003.12:157087700:GT: 15/1832) Row 9130984 (NC_000003.12:157087702::GT 6/1832)	-	Apr 25, 2020 (154)
70	Northern Sweden	NC_000003.11 - 156805490	Jul 13, 2019 (153)
71	8.3KJPN Submission ignored due to conflicting rows: Row 20356794 (NC_000003.11:156805489:GT: 7/16760) Row 20356795 (NC_000003.11:156805489::GT 6/16760)	-	Apr 26, 2021 (155)
72	8.3KJPN Submission ignored due to conflicting rows: Row 20356794 (NC_000003.11:156805489:GT: 7/16760) Row 20356795 (NC_000003.11:156805489::GT 6/16760)	-	Apr 26, 2021 (155)
73	14KJPN Submission ignored due to conflicting rows: Row 29334799 (NC_000003.12:157087700:GT: 3/28258) Row 29334800 (NC_000003.12:157087700::GT 11/28258)	-	Oct 12, 2022 (156)
74	14KJPN Submission ignored due to conflicting rows: Row 29334799 (NC_000003.12:157087700:GT: 3/28258) Row 29334800 (NC_000003.12:157087700::GT 11/28258)	-	Oct 12, 2022 (156)
75	TopMed	NC_000003.12 - 157087701	Apr 26, 2021 (155)
76	UK 10K study - Twins Submission ignored due to conflicting rows: Row 10119529 (NC_000003.11:156805489:GT: 191/3708) Row 10119530 (NC_000003.11:156805489::GT 197/3708)	-	Oct 12, 2018 (152)
77	UK 10K study - Twins Submission ignored due to conflicting rows: Row 10119529 (NC_000003.11:156805489:GT: 191/3708) Row 10119530 (NC_000003.11:156805489::GT 197/3708)	-	Oct 12, 2018 (152)
78	ALFA	NC_000003.12 - 157087701	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs372304791	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4083921738	NC_000003.12:157087700:GTGTGTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGT	(self)
427242022, ss4083921737, ss4589864467, ss5256649559	NC_000003.12:157087700:GTGTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT	(self)
ss326608726, ss551397730	NC_000003.10:158288183:GTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	(self)
18161371, ss1371208139	NC_000003.11:156805489:GTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	(self)
ss554032626	NC_000003.11:156805505:GTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	(self)
ss3710634213, ss4083921736, ss5256649556, ss5455729288	NC_000003.12:157087700:GTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGT	(self)
ss326444355, ss553072432	NC_000003.10:158288183:GT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	(self)
ss1703894165, ss1703894190, ss5162387487, ss5826720217	NC_000003.11:156805489:GT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	(self)
ss3952752982, ss4083921735, ss5695497695	NC_000003.12:157087700:GT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	(self)
ss3710634212	NC_000003.12:157087702:GT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGT	(self)
ss326469465, ss551297420	NC_000003.10:158288183::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
867170, 3790600, ss663370443, ss947101131, ss1576073405, ss2030554631, ss2993482960, ss3730505735, ss3784511533, ss3789997546, ss3794872207, ss5162387488, ss5826720216	NC_000003.11:156805489::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss1710113514, ss1710113521	NC_000003.11:156805491::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss1371208142	NC_000003.11:156805493::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss4083921731, ss5256649557, ss5455729287, ss5695497696	NC_000003.12:157087700::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss3952752983	NC_000003.12:157087702::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss3710634211	NC_000003.12:157087704::GT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss1371208145	NC_000003.11:156805493::GTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss4083921732, ss5256649554, ss5455729290	NC_000003.12:157087700::GTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss3828164015	NC_000003.11:156805489::GTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss1371208148	NC_000003.11:156805493::GTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss4083921733, ss5256649555, ss5455729289	NC_000003.12:157087700::GTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss4083921734, ss5256649558	NC_000003.12:157087700::GTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
9393364926	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI
ss2424704995	NC_000003.11:156805489:GTGTGT:	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGT
ss3410215397	NC_000003.12:157087700::GTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT
ss3410215400	NC_000003.12:157087700::GTGTGTGTGT… NC_000003.12:157087700::GTGTGTGTGTGT	NC_000003.12:157087700:GTGTGTGTGTG… NC_000003.12:157087700:GTGTGTGTGTGTGTGTGTGT:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs141674306

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs141674306