Name: rs138241725
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs138241725

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr10:110904252-110904258 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₄ / delT / dupT / dupTT
Variation Type: Indel Insertion and Deletion
Frequency: delT=0.01022 (136/13306, ALFA)
delT=0.0810 (377/4652, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: BBIP1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	13306	TTTTTTT=0.98204	TTT=0.00000, TTTTTT=0.01022, TTTTTTTT=0.00774, TTTTTTTTT=0.00000	0.980153	0.000458	0.019389	5
European	Sub	10648	TTTTTTT=0.97765	TTT=0.00000, TTTTTT=0.01277, TTTTTTTT=0.00958, TTTTTTTTT=0.00000	0.975105	0.000574	0.02432	4
African	Sub	1512	TTTTTTT=1.0000	TTT=0.0000, TTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	50	TTTTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1462	TTTTTTT=1.0000	TTT=0.0000, TTTTTT=0.0000, TTTTTTTT=0.0000, TTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	84	TTTTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	64	TTTTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	20	TTTTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	112	TTTTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	526	TTTTTTT=1.000	TTT=0.000, TTTTTT=0.000, TTTTTTTT=0.000, TTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	82	TTTTTTT=1.00	TTT=0.00, TTTTTT=0.00, TTTTTTTT=0.00, TTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	342	TTTTTTT=0.997	TTT=0.000, TTTTTT=0.000, TTTTTTTT=0.003, TTTTTTTTT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	13306	(T)₇=0.98204	del(T)₄=0.00000, delT=0.01022, dupT=0.00774, dupTT=0.00000
Allele Frequency Aggregator	European	Sub	10648	(T)₇=0.97765	del(T)₄=0.00000, delT=0.01277, dupT=0.00958, dupTT=0.00000
Allele Frequency Aggregator	African	Sub	1512	(T)₇=1.0000	del(T)₄=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	526	(T)₇=1.000	del(T)₄=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Other	Sub	342	(T)₇=0.997	del(T)₄=0.000, delT=0.000, dupT=0.003, dupTT=0.000
Allele Frequency Aggregator	Latin American 1	Sub	112	(T)₇=1.000	del(T)₄=0.000, delT=0.000, dupT=0.000, dupTT=0.000
Allele Frequency Aggregator	Asian	Sub	84	(T)₇=1.00	del(T)₄=0.00, delT=0.00, dupT=0.00, dupTT=0.00
Allele Frequency Aggregator	South Asian	Sub	82	(T)₇=1.00	del(T)₄=0.00, delT=0.00, dupT=0.00, dupTT=0.00
1000Genomes	Global	Study-wide	4652	(T)₇=0.9190	delT=0.0810
1000Genomes	African	Sub	1063	(T)₇=0.8956	delT=0.1044
1000Genomes	East Asian	Sub	1006	(T)₇=0.9036	delT=0.0964
1000Genomes	South Asian	Sub	964	(T)₇=0.908	delT=0.092
1000Genomes	Europe	Sub	957	(T)₇=0.935	delT=0.065
1000Genomes	American	Sub	662	(T)₇=0.973	delT=0.027

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 10	NC_000010.11:g.110904255_110904258del
GRCh38.p14 chr 10	NC_000010.11:g.110904258del
GRCh38.p14 chr 10	NC_000010.11:g.110904258dup
GRCh38.p14 chr 10	NC_000010.11:g.110904257_110904258dup
GRCh37.p13 chr 10	NC_000010.10:g.112664013_112664016del
GRCh37.p13 chr 10	NC_000010.10:g.112664016del
GRCh37.p13 chr 10	NC_000010.10:g.112664016dup
GRCh37.p13 chr 10	NC_000010.10:g.112664015_112664016dup
BBIP1 RefSeqGene	NG_041778.1:g.20112_20115del
BBIP1 RefSeqGene	NG_041778.1:g.20115del
BBIP1 RefSeqGene	NG_041778.1:g.20115dup
BBIP1 RefSeqGene	NG_041778.1:g.20114_20115dup

Gene: BBIP1, BBSome interacting protein 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
BBIP1 transcript variant 1	NM_001195304.2:c.195-2643… NM_001195304.2:c.195-2643_195-2640del	N/A	Intron Variant
BBIP1 transcript variant 2	NM_001195305.3:c.38-2643_… NM_001195305.3:c.38-2643_38-2640del	N/A	Intron Variant
BBIP1 transcript variant 3	NM_001195306.2:c.38-2643_… NM_001195306.2:c.38-2643_38-2640del	N/A	Intron Variant
BBIP1 transcript variant 4	NM_001195307.2:c.38-3729_… NM_001195307.2:c.38-3729_38-3726del	N/A	Intron Variant
BBIP1 transcript variant 5	NM_001243783.3:c.-29-2643… NM_001243783.3:c.-29-2643_-29-2640del	N/A	Intron Variant
BBIP1 transcript variant X1	XM_047426004.1:c.38-2643_… XM_047426004.1:c.38-2643_38-2640del	N/A	Intron Variant
BBIP1 transcript variant X2	XM_047426005.1:c.-29-2643… XM_047426005.1:c.-29-2643_-29-2640del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₇=	del(T)₄	delT	dupT	dupTT
GRCh38.p14 chr 10	NC_000010.11:g.110904252_110904258=	NC_000010.11:g.110904255_110904258del	NC_000010.11:g.110904258del	NC_000010.11:g.110904258dup	NC_000010.11:g.110904257_110904258dup
GRCh37.p13 chr 10	NC_000010.10:g.112664010_112664016=	NC_000010.10:g.112664013_112664016del	NC_000010.10:g.112664016del	NC_000010.10:g.112664016dup	NC_000010.10:g.112664015_112664016dup
BBIP1 RefSeqGene	NG_041778.1:g.20109_20115=	NG_041778.1:g.20112_20115del	NG_041778.1:g.20115del	NG_041778.1:g.20115dup	NG_041778.1:g.20114_20115dup
BBIP1 transcript variant 1	NM_001195304.1:c.195-2640=	NM_001195304.1:c.195-2643_195-2640del	NM_001195304.1:c.195-2640del	NM_001195304.1:c.195-2640dup	NM_001195304.1:c.195-2641_195-2640dup
BBIP1 transcript variant 1	NM_001195304.2:c.195-2640=	NM_001195304.2:c.195-2643_195-2640del	NM_001195304.2:c.195-2640del	NM_001195304.2:c.195-2640dup	NM_001195304.2:c.195-2641_195-2640dup
BBIP1 transcript variant 2	NM_001195305.1:c.38-2640=	NM_001195305.1:c.38-2643_38-2640del	NM_001195305.1:c.38-2640del	NM_001195305.1:c.38-2640dup	NM_001195305.1:c.38-2641_38-2640dup
BBIP1 transcript variant 2	NM_001195305.3:c.38-2640=	NM_001195305.3:c.38-2643_38-2640del	NM_001195305.3:c.38-2640del	NM_001195305.3:c.38-2640dup	NM_001195305.3:c.38-2641_38-2640dup
BBIP1 transcript variant 3	NM_001195306.1:c.38-2640=	NM_001195306.1:c.38-2643_38-2640del	NM_001195306.1:c.38-2640del	NM_001195306.1:c.38-2640dup	NM_001195306.1:c.38-2641_38-2640dup
BBIP1 transcript variant 3	NM_001195306.2:c.38-2640=	NM_001195306.2:c.38-2643_38-2640del	NM_001195306.2:c.38-2640del	NM_001195306.2:c.38-2640dup	NM_001195306.2:c.38-2641_38-2640dup
BBIP1 transcript variant 4	NM_001195307.1:c.38-3726=	NM_001195307.1:c.38-3729_38-3726del	NM_001195307.1:c.38-3726del	NM_001195307.1:c.38-3726dup	NM_001195307.1:c.38-3727_38-3726dup
BBIP1 transcript variant 4	NM_001195307.2:c.38-3726=	NM_001195307.2:c.38-3729_38-3726del	NM_001195307.2:c.38-3726del	NM_001195307.2:c.38-3726dup	NM_001195307.2:c.38-3727_38-3726dup
BBIP1 transcript variant 5	NM_001243783.1:c.-29-2640=	NM_001243783.1:c.-29-2643_-29-2640del	NM_001243783.1:c.-29-2640del	NM_001243783.1:c.-29-2640dup	NM_001243783.1:c.-29-2641_-29-2640dup
BBIP1 transcript variant 5	NM_001243783.3:c.-29-2640=	NM_001243783.3:c.-29-2643_-29-2640del	NM_001243783.3:c.-29-2640del	NM_001243783.3:c.-29-2640dup	NM_001243783.3:c.-29-2641_-29-2640dup
BBIP1 transcript variant X1	XM_047426004.1:c.38-2640=	XM_047426004.1:c.38-2643_38-2640del	XM_047426004.1:c.38-2640del	XM_047426004.1:c.38-2640dup	XM_047426004.1:c.38-2641_38-2640dup
BBIP1 transcript variant X2	XM_047426005.1:c.-29-2640=	XM_047426005.1:c.-29-2643_-29-2640del	XM_047426005.1:c.-29-2640del	XM_047426005.1:c.-29-2640dup	XM_047426005.1:c.-29-2641_-29-2640dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

53 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss79754790	Oct 12, 2018 (152)
2	GMI	ss287865841	May 09, 2011 (137)
3	PJP	ss294676506	Oct 12, 2018 (152)
4	1000GENOMES	ss327280362	May 09, 2011 (134)
5	1000GENOMES	ss327363839	Jan 10, 2018 (151)
6	LUNTER	ss552068985	Oct 12, 2018 (152)
7	LUNTER	ss552318851	Oct 12, 2018 (152)
8	LUNTER	ss553427600	Apr 25, 2013 (138)
9	TISHKOFF	ss554548614	Apr 25, 2013 (138)
10	TISHKOFF	ss561361331	Oct 12, 2018 (152)
11	SSMP	ss663952615	Apr 01, 2015 (144)
12	1000GENOMES	ss1370108262	Aug 21, 2014 (142)
13	1000GENOMES	ss1370108263	Aug 21, 2014 (142)
14	EVA_UK10K_ALSPAC	ss1706901018	Apr 01, 2015 (144)
15	EVA_UK10K_TWINSUK	ss1706901149	Apr 01, 2015 (144)
16	EVA_UK10K_TWINSUK	ss1710488488	Apr 01, 2015 (144)
17	EVA_UK10K_ALSPAC	ss1710488510	Apr 01, 2015 (144)
18	HAMMER_LAB	ss1806569766	Sep 08, 2015 (146)
19	SWEGEN	ss3007152482	Jan 10, 2018 (151)
20	MCHAISSO	ss3063669513	Jan 10, 2018 (151)
21	EGCUT_WGS	ss3674567209	Jul 13, 2019 (153)
22	EGCUT_WGS	ss3674567210	Jul 13, 2019 (153)
23	EVA_DECODE	ss3690686414	Jul 13, 2019 (153)
24	EVA_DECODE	ss3690686415	Jul 13, 2019 (153)
25	ACPOP	ss3737681792	Jul 13, 2019 (153)
26	ACPOP	ss3737681793	Jul 13, 2019 (153)
27	PACBIO	ss3786786776	Jul 13, 2019 (153)
28	PACBIO	ss3791948840	Jul 13, 2019 (153)
29	PACBIO	ss3796830928	Jul 13, 2019 (153)
30	KHV_HUMAN_GENOMES	ss3813966061	Jul 13, 2019 (153)
31	KHV_HUMAN_GENOMES	ss3813966062	Jul 13, 2019 (153)
32	EVA	ss3832333830	Apr 26, 2020 (154)
33	EVA	ss3839706971	Apr 26, 2020 (154)
34	EVA	ss3845181263	Apr 26, 2020 (154)
35	KOGIC	ss3968681624	Apr 26, 2020 (154)
36	KOGIC	ss3968681625	Apr 26, 2020 (154)
37	GNOMAD	ss4225638474	Apr 26, 2021 (155)
38	GNOMAD	ss4225638475	Apr 26, 2021 (155)
39	GNOMAD	ss4225638477	Apr 26, 2021 (155)
40	GNOMAD	ss4225638478	Apr 26, 2021 (155)
41	TOMMO_GENOMICS	ss5199486769	Apr 26, 2021 (155)
42	TOMMO_GENOMICS	ss5199486770	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5199486771	Apr 26, 2021 (155)
44	1000G_HIGH_COVERAGE	ss5285476114	Oct 16, 2022 (156)
45	1000G_HIGH_COVERAGE	ss5285476115	Oct 16, 2022 (156)
46	HUGCELL_USP	ss5480898599	Oct 16, 2022 (156)
47	HUGCELL_USP	ss5480898600	Oct 16, 2022 (156)
48	TOMMO_GENOMICS	ss5745860332	Oct 16, 2022 (156)
49	TOMMO_GENOMICS	ss5745860333	Oct 16, 2022 (156)
50	TOMMO_GENOMICS	ss5745860334	Oct 16, 2022 (156)
51	YY_MCH	ss5811886525	Oct 16, 2022 (156)
52	EVA	ss5824962365	Oct 16, 2022 (156)
53	EVA	ss5824962366	Oct 16, 2022 (156)
54	1000Genomes	NC_000010.10 - 112664010	Oct 12, 2018 (152)
55	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 28614991 (NC_000010.10:112664009:T: 193/3854) Row 28614992 (NC_000010.10:112664009::T 183/3854)	-	Oct 12, 2018 (152)
56	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 28614991 (NC_000010.10:112664009:T: 193/3854) Row 28614992 (NC_000010.10:112664009::T 183/3854)	-	Oct 12, 2018 (152)
57	Genetic variation in the Estonian population Submission ignored due to conflicting rows: Row 20305457 (NC_000010.10:112664009::T 102/4212) Row 20305458 (NC_000010.10:112664009:T: 133/4270)	-	Oct 12, 2018 (152)
58	Genetic variation in the Estonian population Submission ignored due to conflicting rows: Row 20305457 (NC_000010.10:112664009::T 102/4212) Row 20305458 (NC_000010.10:112664009:T: 133/4270)	-	Oct 12, 2018 (152)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 364056650 (NC_000010.11:110904251::T 12035/140106) Row 364056651 (NC_000010.11:110904251::TT 1/140124) Row 364056653 (NC_000010.11:110904251:T: 7959/140112)...	-	Apr 26, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 364056650 (NC_000010.11:110904251::T 12035/140106) Row 364056651 (NC_000010.11:110904251::TT 1/140124) Row 364056653 (NC_000010.11:110904251:T: 7959/140112)...	-	Apr 26, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 364056650 (NC_000010.11:110904251::T 12035/140106) Row 364056651 (NC_000010.11:110904251::TT 1/140124) Row 364056653 (NC_000010.11:110904251:T: 7959/140112)...	-	Apr 26, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 364056650 (NC_000010.11:110904251::T 12035/140106) Row 364056651 (NC_000010.11:110904251::TT 1/140124) Row 364056653 (NC_000010.11:110904251:T: 7959/140112)...	-	Apr 26, 2021 (155)
63	Korean Genome Project Submission ignored due to conflicting rows: Row 25059625 (NC_000010.11:110904251:T: 144/1832) Row 25059626 (NC_000010.11:110904252::T 4/1832)	-	Apr 26, 2020 (154)
64	Korean Genome Project Submission ignored due to conflicting rows: Row 25059625 (NC_000010.11:110904251:T: 144/1832) Row 25059626 (NC_000010.11:110904252::T 4/1832)	-	Apr 26, 2020 (154)
65	Northern Sweden Submission ignored due to conflicting rows: Row 10966657 (NC_000010.10:112664009:T: 29/600) Row 10966658 (NC_000010.10:112664009::T 15/600)	-	Jul 13, 2019 (153)
66	Northern Sweden Submission ignored due to conflicting rows: Row 10966657 (NC_000010.10:112664009:T: 29/600) Row 10966658 (NC_000010.10:112664009::T 15/600)	-	Jul 13, 2019 (153)
67	8.3KJPN Submission ignored due to conflicting rows: Row 57456076 (NC_000010.10:112664009:T: 1163/16760) Row 57456077 (NC_000010.10:112664009::T 42/16760) Row 57456078 (NC_000010.10:112664009:TTTT: 1/16760)	-	Apr 26, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 57456076 (NC_000010.10:112664009:T: 1163/16760) Row 57456077 (NC_000010.10:112664009::T 42/16760) Row 57456078 (NC_000010.10:112664009:TTTT: 1/16760)	-	Apr 26, 2021 (155)
69	8.3KJPN Submission ignored due to conflicting rows: Row 57456076 (NC_000010.10:112664009:T: 1163/16760) Row 57456077 (NC_000010.10:112664009::T 42/16760) Row 57456078 (NC_000010.10:112664009:TTTT: 1/16760)	-	Apr 26, 2021 (155)
70	14KJPN Submission ignored due to conflicting rows: Row 79697436 (NC_000010.11:110904251:T: 1956/28258) Row 79697437 (NC_000010.11:110904251::T 69/28258) Row 79697438 (NC_000010.11:110904251:TTTT: 3/28258)	-	Oct 16, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 79697436 (NC_000010.11:110904251:T: 1956/28258) Row 79697437 (NC_000010.11:110904251::T 69/28258) Row 79697438 (NC_000010.11:110904251:TTTT: 3/28258)	-	Oct 16, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 79697436 (NC_000010.11:110904251:T: 1956/28258) Row 79697437 (NC_000010.11:110904251::T 69/28258) Row 79697438 (NC_000010.11:110904251:TTTT: 3/28258)	-	Oct 16, 2022 (156)
73	UK 10K study - Twins Submission ignored due to conflicting rows: Row 28614991 (NC_000010.10:112664009:T: 210/3708) Row 28614992 (NC_000010.10:112664009::T 153/3708)	-	Oct 12, 2018 (152)
74	UK 10K study - Twins Submission ignored due to conflicting rows: Row 28614991 (NC_000010.10:112664009:T: 210/3708) Row 28614992 (NC_000010.10:112664009::T 153/3708)	-	Oct 12, 2018 (152)
75	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 6349169 (NC_000010.10:112664009:T: 25/215) Row 6349170 (NC_000010.10:112664009::T 1/191)	-	Jul 13, 2019 (153)
76	A Vietnamese Genetic Variation Database Submission ignored due to conflicting rows: Row 6349169 (NC_000010.10:112664009:T: 25/215) Row 6349170 (NC_000010.10:112664009::T 1/191)	-	Jul 13, 2019 (153)
77	ALFA	NC_000010.11 - 110904252	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs144745783	May 04, 2012 (137)
rs371093660	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5199486771	NC_000010.10:112664009:TTTT:	NC_000010.11:110904251:TTTTTTT:TTT	(self)
ss4225638478, ss5745860334	NC_000010.11:110904251:TTTT:	NC_000010.11:110904251:TTTTTTT:TTT	(self)
8538320013	NC_000010.11:110904251:TTTTTTT:TTT	NC_000010.11:110904251:TTTTTTT:TTT	(self)
ss327280362, ss553427600	NC_000010.9:112653999:T:	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
51518533, ss663952615, ss1370108262, ss1706901018, ss1706901149, ss3007152482, ss3674567210, ss3737681792, ss3839706971, ss5199486769, ss5824962365	NC_000010.10:112664009:T:	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
ss554548614	NC_000010.10:112664015:T:	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
ss3063669513, ss3690686414, ss3813966062, ss3845181263, ss3968681624, ss4225638477, ss5285476114, ss5480898600, ss5745860332, ss5811886525	NC_000010.11:110904251:T:	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
8538320013	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
ss287865841	NT_030059.13:63468473:T:	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTT	(self)
ss327363839, ss552068985, ss552318851	NC_000010.9:112653999::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss294676506	NC_000010.9:112654006::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss1806569766, ss3674567209, ss3737681793, ss3786786776, ss3791948840, ss3796830928, ss3832333830, ss5199486770, ss5824962366	NC_000010.10:112664009::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss1370108263, ss1710488488, ss1710488510	NC_000010.10:112664010::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss561361331	NC_000010.10:112664016::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss4225638474, ss5285476115, ss5480898599, ss5745860333	NC_000010.11:110904251::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
8538320013	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss3690686415, ss3813966061, ss3968681625	NC_000010.11:110904252::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss79754790	NT_030059.13:63468480::T	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTT	(self)
ss4225638475	NC_000010.11:110904251::TT	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTTT	(self)
8538320013	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTTT	NC_000010.11:110904251:TTTTTTT:TTT… NC_000010.11:110904251:TTTTTTT:TTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs138241725

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs138241725