Name: rs1167186423
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1167186423

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:54358398-54358411 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(AT)₃ / delATAT / delAT / dupAT
Variation Type: Indel Insertion and Deletion
Frequency: delAT=0.0016 (8/4880, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LAIR1 : Intron Variant
LILRB2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	4880	ATATATATATATAT=0.9982	ATATATAT=0.0000, ATATATATAT=0.0000, ATATATATATAT=0.0016, ATATATATATATATAT=0.0002	0.99672	0.0	0.00328	0
European	Sub	4600	ATATATATATATAT=0.9980	ATATATAT=0.0000, ATATATATAT=0.0000, ATATATATATAT=0.0017, ATATATATATATATAT=0.0002	0.99652	0.0	0.00348	0
African	Sub	216	ATATATATATATAT=1.000	ATATATAT=0.000, ATATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATATAT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	10	ATATATATATATAT=1.0	ATATATAT=0.0, ATATATATAT=0.0, ATATATATATAT=0.0, ATATATATATATATAT=0.0	1.0	0.0	0.0	N/A
African American	Sub	206	ATATATATATATAT=1.000	ATATATAT=0.000, ATATATATAT=0.000, ATATATATATAT=0.000, ATATATATATATATAT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	4	ATATATATATATAT=1.0	ATATATAT=0.0, ATATATATAT=0.0, ATATATATATAT=0.0, ATATATATATATATAT=0.0	1.0	0.0	0.0	N/A
East Asian	Sub	4	ATATATATATATAT=1.0	ATATATAT=0.0, ATATATATAT=0.0, ATATATATATAT=0.0, ATATATATATATATAT=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	0	ATATATATATATAT=0	ATATATAT=0, ATATATATAT=0, ATATATATATAT=0, ATATATATATATATAT=0	0	0	0	N/A
Latin American 1	Sub	6	ATATATATATATAT=1.0	ATATATAT=0.0, ATATATATAT=0.0, ATATATATATAT=0.0, ATATATATATATATAT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	18	ATATATATATATAT=1.00	ATATATAT=0.00, ATATATATAT=0.00, ATATATATATAT=0.00, ATATATATATATATAT=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	2	ATATATATATATAT=1.0	ATATATAT=0.0, ATATATATAT=0.0, ATATATATATAT=0.0, ATATATATATATATAT=0.0	1.0	0.0	0.0	N/A
Other	Sub	34	ATATATATATATAT=1.00	ATATATAT=0.00, ATATATATAT=0.00, ATATATATATAT=0.00, ATATATATATATATAT=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	4880	(AT)₇=0.9982	del(AT)₃=0.0000, delATAT=0.0000, delAT=0.0016, dupAT=0.0002
Allele Frequency Aggregator	European	Sub	4600	(AT)₇=0.9980	del(AT)₃=0.0000, delATAT=0.0000, delAT=0.0017, dupAT=0.0002
Allele Frequency Aggregator	African	Sub	216	(AT)₇=1.000	del(AT)₃=0.000, delATAT=0.000, delAT=0.000, dupAT=0.000
Allele Frequency Aggregator	Other	Sub	34	(AT)₇=1.00	del(AT)₃=0.00, delATAT=0.00, delAT=0.00, dupAT=0.00
Allele Frequency Aggregator	Latin American 2	Sub	18	(AT)₇=1.00	del(AT)₃=0.00, delATAT=0.00, delAT=0.00, dupAT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	6	(AT)₇=1.0	del(AT)₃=0.0, delATAT=0.0, delAT=0.0, dupAT=0.0
Allele Frequency Aggregator	Asian	Sub	4	(AT)₇=1.0	del(AT)₃=0.0, delATAT=0.0, delAT=0.0, dupAT=0.0
Allele Frequency Aggregator	South Asian	Sub	2	(AT)₇=1.0	del(AT)₃=0.0, delATAT=0.0, delAT=0.0, dupAT=0.0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.54358398AT[4]
GRCh38.p14 chr 19	NC_000019.10:g.54358398AT[5]
GRCh38.p14 chr 19	NC_000019.10:g.54358398AT[6]
GRCh38.p14 chr 19	NC_000019.10:g.54358398AT[8]
GRCh37.p13 chr 19 fix patch HG1079_PATCH	NW_004166865.1:g.332765AT[4]
GRCh37.p13 chr 19 fix patch HG1079_PATCH	NW_004166865.1:g.332765AT[5]
GRCh37.p13 chr 19 fix patch HG1079_PATCH	NW_004166865.1:g.332765AT[6]
GRCh37.p13 chr 19 fix patch HG1079_PATCH	NW_004166865.1:g.332765AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF2_CTG3_1	NW_003571061.2:g.340360AT[7]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF2_CTG3_1	NW_003571061.2:g.340360AT[4]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF2_CTG3_1	NW_003571061.2:g.340360AT[5]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF2_CTG3_1	NW_003571061.2:g.340360AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_COX2_CTG3_1	NW_003571055.2:g.339804AT[7]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_COX2_CTG3_1	NW_003571055.2:g.339804AT[4]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_COX2_CTG3_1	NW_003571055.2:g.339804AT[5]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_COX2_CTG3_1	NW_003571055.2:g.339804AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19_4_CTG3_1	NT_187693.1:g.341121AT[7]
GRCh38.p14 chr 19 alt locus HSCHR19_4_CTG3_1	NT_187693.1:g.341121AT[4]
GRCh38.p14 chr 19 alt locus HSCHR19_4_CTG3_1	NT_187693.1:g.341121AT[5]
GRCh38.p14 chr 19 alt locus HSCHR19_4_CTG3_1	NT_187693.1:g.341121AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF1_CTG3_1	NW_003571060.1:g.263048AT[7]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF1_CTG3_1	NW_003571060.1:g.263048AT[4]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF1_CTG3_1	NW_003571060.1:g.263048AT[5]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF1_CTG3_1	NW_003571060.1:g.263048AT[8]
GRCh37.p13 chr 19	NC_000019.9:g.54870007AT[7]
GRCh37.p13 chr 19	NC_000019.9:g.54870007AT[4]
GRCh37.p13 chr 19	NC_000019.9:g.54870007AT[5]
GRCh37.p13 chr 19	NC_000019.9:g.54870007AT[8]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_PGF2_CTG1	NW_003571061.1:g.340359AT[7]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_PGF2_CTG1	NW_003571061.1:g.340359AT[4]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_PGF2_CTG1	NW_003571061.1:g.340359AT[5]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_PGF2_CTG1	NW_003571061.1:g.340359AT[8]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_COX2_CTG1	NW_003571055.1:g.339803AT[7]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_COX2_CTG1	NW_003571055.1:g.339803AT[4]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_COX2_CTG1	NW_003571055.1:g.339803AT[5]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_COX2_CTG1	NW_003571055.1:g.339803AT[8]

Gene: LAIR1, leukocyte associated immunoglobulin like receptor 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LAIR1 transcript variant c	NM_001289023.3:c.362-1445… NM_001289023.3:c.362-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant e	NM_001289025.3:c.413-1445… NM_001289025.3:c.413-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant f	NM_001289026.3:c.395-1445… NM_001289026.3:c.395-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant g	NM_001289027.3:c.362-1445… NM_001289027.3:c.362-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant a	NM_002287.6:c.416-1445AT[… NM_002287.6:c.416-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant b	NM_021706.5:c.365-1445AT[… NM_021706.5:c.365-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant h	NR_110279.3:n.	N/A	Intron Variant
LAIR1 transcript variant i	NR_110280.3:n.	N/A	Intron Variant
LAIR1 transcript variant X1	XM_047438810.1:c.395-1445… XM_047438810.1:c.395-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant X2	XM_047438811.1:c.395-1445… XM_047438811.1:c.395-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant X3	XM_047438812.1:c.362-1445… XM_047438812.1:c.362-1445AT[4]	N/A	Intron Variant
LAIR1 transcript variant X4	XM_017026803.3:c.60_73=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(AT)₇=	del(AT)₃	delATAT	delAT	dupAT
GRCh38.p14 chr 19	NC_000019.10:g.54358398_54358411=	NC_000019.10:g.54358398AT[4]	NC_000019.10:g.54358398AT[5]	NC_000019.10:g.54358398AT[6]	NC_000019.10:g.54358398AT[8]
GRCh37.p13 chr 19 fix patch HG1079_PATCH	NW_004166865.1:g.332765_332778=	NW_004166865.1:g.332765AT[4]	NW_004166865.1:g.332765AT[5]	NW_004166865.1:g.332765AT[6]	NW_004166865.1:g.332765AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF2_CTG3_1	NW_003571061.2:g.340360AT[7]	NW_003571061.2:g.340360AT[4]	NW_003571061.2:g.340360AT[5]	NW_003571061.2:g.340360_340371=	NW_003571061.2:g.340360AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_COX2_CTG3_1	NW_003571055.2:g.339804AT[7]	NW_003571055.2:g.339804AT[4]	NW_003571055.2:g.339804AT[5]	NW_003571055.2:g.339804_339815=	NW_003571055.2:g.339804AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19_4_CTG3_1	NT_187693.1:g.341121AT[7]	NT_187693.1:g.341121AT[4]	NT_187693.1:g.341121AT[5]	NT_187693.1:g.341121_341132=	NT_187693.1:g.341121AT[8]
GRCh38.p14 chr 19 alt locus HSCHR19LRC_PGF1_CTG3_1	NW_003571060.1:g.263048AT[7]	NW_003571060.1:g.263048AT[4]	NW_003571060.1:g.263048AT[5]	NW_003571060.1:g.263048_263059=	NW_003571060.1:g.263048AT[8]
GRCh37.p13 chr 19	NC_000019.9:g.54870007AT[7]	NC_000019.9:g.54870007AT[4]	NC_000019.9:g.54870007AT[5]	NC_000019.9:g.54870007_54870018=	NC_000019.9:g.54870007AT[8]
LAIR1 transcript variant X4	XM_017026803.3:c.60_73=	XM_017026803.3:c.*60AT[4]	XM_017026803.3:c.*60AT[5]	XM_017026803.3:c.*60AT[6]	XM_017026803.3:c.*60AT[8]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_PGF2_CTG1	NW_003571061.1:g.340359AT[7]	NW_003571061.1:g.340359AT[4]	NW_003571061.1:g.340359AT[5]	NW_003571061.1:g.340359_340370=	NW_003571061.1:g.340359AT[8]
GRCh37.p13 chr 19 novel patch HSCHR19LRC_COX2_CTG1	NW_003571055.1:g.339803AT[7]	NW_003571055.1:g.339803AT[4]	NW_003571055.1:g.339803AT[5]	NW_003571055.1:g.339803_339814=	NW_003571055.1:g.339803AT[8]
LILRB2 transcript variant 2	NM_001080978.4:c.23+3339AT[7]	NM_001080978.4:c.23+3339AT[4]	NM_001080978.4:c.23+3339AT[5]	NM_001080978.4:c.23+3350=	NM_001080978.4:c.23+3339AT[8]
LILRB1 transcript variant 2	NM_001081637.1:c.17-541AT[7]	NM_001081637.1:c.17-541AT[4]	NM_001081637.1:c.17-541AT[5]	NM_001081637.1:c.17-541=	NM_001081637.1:c.17-541AT[8]
LILRB1 transcript variant 3	NM_001081638.2:c.17-541AT[7]	NM_001081638.2:c.17-541AT[4]	NM_001081638.2:c.17-541AT[5]	NM_001081638.2:c.17-541=	NM_001081638.2:c.17-541AT[8]
LILRB1 transcript variant 4	NM_001081639.2:c.17-541AT[7]	NM_001081639.2:c.17-541AT[4]	NM_001081639.2:c.17-541AT[5]	NM_001081639.2:c.17-541=	NM_001081639.2:c.17-541AT[8]
LILRB1 transcript variant 5	NM_001278398.1:c.17-541AT[7]	NM_001278398.1:c.17-541AT[4]	NM_001278398.1:c.17-541AT[5]	NM_001278398.1:c.17-541=	NM_001278398.1:c.17-541AT[8]
LAIR1 transcript variant c	NM_001289023.3:c.362-1432=	NM_001289023.3:c.362-1445AT[4]	NM_001289023.3:c.362-1445AT[5]	NM_001289023.3:c.362-1445AT[6]	NM_001289023.3:c.362-1445AT[8]
LAIR1 transcript variant e	NM_001289025.3:c.413-1432=	NM_001289025.3:c.413-1445AT[4]	NM_001289025.3:c.413-1445AT[5]	NM_001289025.3:c.413-1445AT[6]	NM_001289025.3:c.413-1445AT[8]
LAIR1 transcript variant f	NM_001289026.3:c.395-1432=	NM_001289026.3:c.395-1445AT[4]	NM_001289026.3:c.395-1445AT[5]	NM_001289026.3:c.395-1445AT[6]	NM_001289026.3:c.395-1445AT[8]
LAIR1 transcript variant g	NM_001289027.3:c.362-1432=	NM_001289027.3:c.362-1445AT[4]	NM_001289027.3:c.362-1445AT[5]	NM_001289027.3:c.362-1445AT[6]	NM_001289027.3:c.362-1445AT[8]
LAIR1 transcript variant a	NM_002287.3:c.416-1443AT[7]	NM_002287.3:c.416-1443AT[4]	NM_002287.3:c.416-1443AT[5]	NM_002287.3:c.416-1432=	NM_002287.3:c.416-1443AT[8]
LAIR1 transcript variant a	NM_002287.6:c.416-1432=	NM_002287.6:c.416-1445AT[4]	NM_002287.6:c.416-1445AT[5]	NM_002287.6:c.416-1445AT[6]	NM_002287.6:c.416-1445AT[8]
LILRB2 transcript variant 1	NM_005874.5:c.23+3339AT[7]	NM_005874.5:c.23+3339AT[4]	NM_005874.5:c.23+3339AT[5]	NM_005874.5:c.23+3350=	NM_005874.5:c.23+3339AT[8]
LAIR1 transcript variant b	NM_021706.2:c.365-1443AT[7]	NM_021706.2:c.365-1443AT[4]	NM_021706.2:c.365-1443AT[5]	NM_021706.2:c.365-1432=	NM_021706.2:c.365-1443AT[8]
LAIR1 transcript variant b	NM_021706.5:c.365-1432=	NM_021706.5:c.365-1445AT[4]	NM_021706.5:c.365-1445AT[5]	NM_021706.5:c.365-1445AT[6]	NM_021706.5:c.365-1445AT[8]
LAIR1 transcript variant X1	XM_005258919.1:c.413-1443AT[7]	XM_005258919.1:c.413-1443AT[4]	XM_005258919.1:c.413-1443AT[5]	XM_005258919.1:c.413-1432=	XM_005258919.1:c.413-1443AT[8]
LAIR1 transcript variant X2	XM_005258920.1:c.398-1443AT[7]	XM_005258920.1:c.398-1443AT[4]	XM_005258920.1:c.398-1443AT[5]	XM_005258920.1:c.398-1432=	XM_005258920.1:c.398-1443AT[8]
LAIR1 transcript variant X3	XM_005258921.1:c.395-1443AT[7]	XM_005258921.1:c.395-1443AT[4]	XM_005258921.1:c.395-1443AT[5]	XM_005258921.1:c.395-1432=	XM_005258921.1:c.395-1443AT[8]
LAIR1 transcript variant X4	XM_005258922.1:c.362-1443AT[7]	XM_005258922.1:c.362-1443AT[4]	XM_005258922.1:c.362-1443AT[5]	XM_005258922.1:c.362-1432=	XM_005258922.1:c.362-1443AT[8]
LAIR1 transcript variant X5	XM_005258923.1:c.362-1443AT[7]	XM_005258923.1:c.362-1443AT[4]	XM_005258923.1:c.362-1443AT[5]	XM_005258923.1:c.362-1432=	XM_005258923.1:c.362-1443AT[8]
LAIR1 transcript variant X1	XM_005277109.1:c.416-1443AT[7]	XM_005277109.1:c.416-1443AT[4]	XM_005277109.1:c.416-1443AT[5]	XM_005277109.1:c.416-1432=	XM_005277109.1:c.416-1443AT[8]
LAIR1 transcript variant X2	XM_005277110.1:c.413-1443AT[7]	XM_005277110.1:c.413-1443AT[4]	XM_005277110.1:c.413-1443AT[5]	XM_005277110.1:c.413-1432=	XM_005277110.1:c.413-1443AT[8]
LAIR1 transcript variant X3	XM_005277111.1:c.398-1443AT[7]	XM_005277111.1:c.398-1443AT[4]	XM_005277111.1:c.398-1443AT[5]	XM_005277111.1:c.398-1432=	XM_005277111.1:c.398-1443AT[8]
LAIR1 transcript variant X4	XM_005277112.1:c.395-1443AT[7]	XM_005277112.1:c.395-1443AT[4]	XM_005277112.1:c.395-1443AT[5]	XM_005277112.1:c.395-1432=	XM_005277112.1:c.395-1443AT[8]
LAIR1 transcript variant X5	XM_005277113.1:c.362-1443AT[7]	XM_005277113.1:c.362-1443AT[4]	XM_005277113.1:c.362-1443AT[5]	XM_005277113.1:c.362-1432=	XM_005277113.1:c.362-1443AT[8]
LAIR1 transcript variant X6	XM_005277114.1:c.362-1443AT[7]	XM_005277114.1:c.362-1443AT[4]	XM_005277114.1:c.362-1443AT[5]	XM_005277114.1:c.362-1432=	XM_005277114.1:c.362-1443AT[8]
LAIR1 transcript variant X8	XM_005277305.1:c.413-1443AT[7]	XM_005277305.1:c.413-1443AT[4]	XM_005277305.1:c.413-1443AT[5]	XM_005277305.1:c.413-1432=	XM_005277305.1:c.413-1443AT[8]
LAIR1 transcript variant X9	XM_005277306.1:c.395-1443AT[7]	XM_005277306.1:c.395-1443AT[4]	XM_005277306.1:c.395-1443AT[5]	XM_005277306.1:c.395-1432=	XM_005277306.1:c.395-1443AT[8]
LAIR1 transcript variant X10	XM_005277307.1:c.362-1443AT[7]	XM_005277307.1:c.362-1443AT[4]	XM_005277307.1:c.362-1443AT[5]	XM_005277307.1:c.362-1432=	XM_005277307.1:c.362-1443AT[8]
LAIR1 transcript variant X11	XM_005277308.1:c.362-1443AT[7]	XM_005277308.1:c.362-1443AT[4]	XM_005277308.1:c.362-1443AT[5]	XM_005277308.1:c.362-1432=	XM_005277308.1:c.362-1443AT[8]
LAIR1 transcript variant X13	XM_005278273.1:c.416-1432=	XM_005278273.1:c.416-1445AT[4]	XM_005278273.1:c.416-1445AT[5]	XM_005278273.1:c.416-1445AT[6]	XM_005278273.1:c.416-1445AT[8]
LAIR1 transcript variant X14	XM_005278274.1:c.413-1432=	XM_005278274.1:c.413-1445AT[4]	XM_005278274.1:c.413-1445AT[5]	XM_005278274.1:c.413-1445AT[6]	XM_005278274.1:c.413-1445AT[8]
LAIR1 transcript variant X15	XM_005278275.1:c.362-1432=	XM_005278275.1:c.362-1445AT[4]	XM_005278275.1:c.362-1445AT[5]	XM_005278275.1:c.362-1445AT[6]	XM_005278275.1:c.362-1445AT[8]
LAIR1 transcript variant X16	XM_005278276.1:c.362-1432=	XM_005278276.1:c.362-1445AT[4]	XM_005278276.1:c.362-1445AT[5]	XM_005278276.1:c.362-1445AT[6]	XM_005278276.1:c.362-1445AT[8]
LAIR1 transcript variant X17	XM_005278277.1:c.395-1432=	XM_005278277.1:c.395-1445AT[4]	XM_005278277.1:c.395-1445AT[5]	XM_005278277.1:c.395-1445AT[6]	XM_005278277.1:c.395-1445AT[8]
LAIR1 transcript variant X1	XM_047438810.1:c.395-1432=	XM_047438810.1:c.395-1445AT[4]	XM_047438810.1:c.395-1445AT[5]	XM_047438810.1:c.395-1445AT[6]	XM_047438810.1:c.395-1445AT[8]
LAIR1 transcript variant X2	XM_047438811.1:c.395-1432=	XM_047438811.1:c.395-1445AT[4]	XM_047438811.1:c.395-1445AT[5]	XM_047438811.1:c.395-1445AT[6]	XM_047438811.1:c.395-1445AT[8]
LAIR1 transcript variant X3	XM_047438812.1:c.362-1432=	XM_047438812.1:c.362-1445AT[4]	XM_047438812.1:c.362-1445AT[5]	XM_047438812.1:c.362-1445AT[6]	XM_047438812.1:c.362-1445AT[8]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

24 SubSNP, 8 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SWEGEN	ss3017678715	Jan 10, 2018 (151)
2	MCHAISSO	ss3063921266	Nov 08, 2017 (151)
3	MCHAISSO	ss3064770371	Nov 08, 2017 (151)
4	MCHAISSO	ss3065720667	Nov 08, 2017 (151)
5	BIOINF_KMB_FNS_UNIBA	ss3645527883	Oct 12, 2018 (152)
6	URBANLAB	ss3650944015	Oct 12, 2018 (152)
7	EVA_DECODE	ss3703006029	Jul 13, 2019 (153)
8	EVA_DECODE	ss3703006030	Jul 13, 2019 (153)
9	EVA	ss3846891919	Apr 27, 2020 (154)
10	GNOMAD	ss4333208452	Apr 27, 2021 (155)
11	GNOMAD	ss4333208453	Apr 27, 2021 (155)
12	GNOMAD	ss4333208454	Apr 27, 2021 (155)
13	TOMMO_GENOMICS	ss5228329199	Apr 27, 2021 (155)
14	TOMMO_GENOMICS	ss5228329200	Apr 27, 2021 (155)
15	1000G_HIGH_COVERAGE	ss5307683201	Oct 13, 2022 (156)
16	1000G_HIGH_COVERAGE	ss5307683202	Oct 13, 2022 (156)
17	HUGCELL_USP	ss5500133691	Oct 13, 2022 (156)
18	HUGCELL_USP	ss5500133692	Oct 13, 2022 (156)
19	TOMMO_GENOMICS	ss5787153053	Oct 13, 2022 (156)
20	TOMMO_GENOMICS	ss5787153054	Oct 13, 2022 (156)
21	YY_MCH	ss5817709761	Oct 13, 2022 (156)
22	EVA	ss5848502752	Oct 13, 2022 (156)
23	EVA	ss5852336232	Oct 13, 2022 (156)
24	EVA	ss5928551806	Oct 13, 2022 (156)
25	gnomAD - Genomes Submission ignored due to conflicting rows: Row 543349246 (NC_000019.10:54358397:AT: 106626/130878) Row 543349247 (NC_000019.10:54358397:ATAT: 3073/131020) Row 543349248 (NC_000019.10:54358397:ATATAT: 1/131040)	-	Apr 27, 2021 (155)
26	gnomAD - Genomes Submission ignored due to conflicting rows: Row 543349246 (NC_000019.10:54358397:AT: 106626/130878) Row 543349247 (NC_000019.10:54358397:ATAT: 3073/131020) Row 543349248 (NC_000019.10:54358397:ATATAT: 1/131040)	-	Apr 27, 2021 (155)
27	gnomAD - Genomes Submission ignored due to conflicting rows: Row 543349246 (NC_000019.10:54358397:AT: 106626/130878) Row 543349247 (NC_000019.10:54358397:ATAT: 3073/131020) Row 543349248 (NC_000019.10:54358397:ATATAT: 1/131040)	-	Apr 27, 2021 (155)
28	8.3KJPN Submission ignored due to conflicting rows: Row 86298506 (NC_000019.9:54870006::AT 752/16760) Row 86298507 (NC_000019.9:54870006:AT: 3/16760)	-	Apr 27, 2021 (155)
29	8.3KJPN Submission ignored due to conflicting rows: Row 86298506 (NC_000019.9:54870006::AT 752/16760) Row 86298507 (NC_000019.9:54870006:AT: 3/16760)	-	Apr 27, 2021 (155)
30	14KJPN Submission ignored due to conflicting rows: Row 120990157 (NC_000019.10:54358397:AT: 19259/28258) Row 120990158 (NC_000019.10:54358397:ATAT: 6/28258)	-	Oct 13, 2022 (156)
31	14KJPN Submission ignored due to conflicting rows: Row 120990157 (NC_000019.10:54358397:AT: 19259/28258) Row 120990158 (NC_000019.10:54358397:ATAT: 6/28258)	-	Oct 13, 2022 (156)
32	ALFA	NC_000019.10 - 54358398	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4333208454	NC_000019.10:54358397:ATATAT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATAT	(self)
7984111142	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATAT	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATAT	(self)
ss3703006030, ss4333208453, ss5307683202, ss5500133692, ss5787153054	NC_000019.10:54358397:ATAT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATAT	(self)
7984111142	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATAT	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATAT	(self)
ss3017678715, ss5228329200	NC_000019.9:54870006:AT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT	(self)
ss5848502752	NC_000019.9:54870016:AT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT
ss3063921266, ss3064770371, ss3065720667, ss3645527883, ss3650944015, ss3846891919, ss4333208452, ss5307683201, ss5500133691, ss5787153053, ss5817709761, ss5852336232, ss5928551806	NC_000019.10:54358397:AT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT	(self)
7984111142	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT	(self)
ss3703006029	NC_000019.10:54358399:AT:	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATAT	(self)
ss5228329199	NC_000019.9:54870006::AT	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATATATAT	(self)
7984111142	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATATATAT	NC_000019.10:54358397:ATATATATATAT… NC_000019.10:54358397:ATATATATATATAT:ATATATATATATATAT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1167186423

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1167186423