Name: rs1156836396
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1156836396

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr13:51403606-51403618 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delAAA / delAA / delA / dupA / dup…
delAAA / delAA / delA / dupA / dup(A)₄ / dup(A)₅ / dup(A)₁₀ / dup(A)₁₁ / dup(A)₁₃ / ins(A)₂₃
Variation Type: Indel Insertion and Deletion
Frequency: dup(A)₄=0.000004 (1/264690, TOPMED)
delAAA=0.00000 (0/11784, ALFA)
delAA=0.00000 (0/11784, ALFA) (+ 4 more)
delA=0.00000 (0/11784, ALFA)
dupA=0.00000 (0/11784, ALFA)
dup(A)₄=0.00000 (0/11784, ALFA)
dup(A)₁₁=0.00000 (0/11784, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: INTS6 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	11784	AAAAAAAAAAAAA=1.00000	AAAAAAAAAA=0.00000, AAAAAAAAAAA=0.00000, AAAAAAAAAAAA=0.00000, AAAAAAAAAAAAAA=0.00000, AAAAAAAAAAAAAAAAA=0.00000, AAAAAAAAAAAAAAAAAAAAAAAA=0.00000	1.0	N/A
European	Sub	7570	AAAAAAAAAAAAA=1.0000	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African	Sub	2806	AAAAAAAAAAAAA=1.0000	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
African Others	Sub	108	AAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
African American	Sub	2698	AAAAAAAAAAAAA=1.0000	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAAAAAAAAAA=0.0000	1.0	N/A
Asian	Sub	106	AAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
East Asian	Sub	82	AAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other Asian	Sub	24	AAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Latin American 1	Sub	140	AAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
Latin American 2	Sub	608	AAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A
South Asian	Sub	92	AAAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00	1.0	N/A
Other	Sub	462	AAAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAAAAAAAAAA=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	- No frequency provided	dup(A)₄=0.000004
Allele Frequency Aggregator	Total	Global	11784	(A)₁₃=1.00000	delAAA=0.00000, delAA=0.00000, delA=0.00000, dupA=0.00000, dup(A)₄=0.00000, dup(A)₁₁=0.00000
Allele Frequency Aggregator	European	Sub	7570	(A)₁₃=1.0000	delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dup(A)₄=0.0000, dup(A)₁₁=0.0000
Allele Frequency Aggregator	African	Sub	2806	(A)₁₃=1.0000	delAAA=0.0000, delAA=0.0000, delA=0.0000, dupA=0.0000, dup(A)₄=0.0000, dup(A)₁₁=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	608	(A)₁₃=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dup(A)₄=0.000, dup(A)₁₁=0.000
Allele Frequency Aggregator	Other	Sub	462	(A)₁₃=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dup(A)₄=0.000, dup(A)₁₁=0.000
Allele Frequency Aggregator	Latin American 1	Sub	140	(A)₁₃=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dup(A)₄=0.000, dup(A)₁₁=0.000
Allele Frequency Aggregator	Asian	Sub	106	(A)₁₃=1.000	delAAA=0.000, delAA=0.000, delA=0.000, dupA=0.000, dup(A)₄=0.000, dup(A)₁₁=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(A)₁₃=1.00	delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dup(A)₄=0.00, dup(A)₁₁=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 13	NC_000013.11:g.51403616_51403618del
GRCh38.p14 chr 13	NC_000013.11:g.51403617_51403618del
GRCh38.p14 chr 13	NC_000013.11:g.51403618del
GRCh38.p14 chr 13	NC_000013.11:g.51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403615_51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403614_51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403609_51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403608_51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403606_51403618dup
GRCh38.p14 chr 13	NC_000013.11:g.51403618_51403619insAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 13	NC_000013.10:g.51977752_51977754del
GRCh37.p13 chr 13	NC_000013.10:g.51977753_51977754del
GRCh37.p13 chr 13	NC_000013.10:g.51977754del
GRCh37.p13 chr 13	NC_000013.10:g.51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977751_51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977750_51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977745_51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977744_51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977742_51977754dup
GRCh37.p13 chr 13	NC_000013.10:g.51977754_51977755insAAAAAAAAAAAAAAAAAAAAAAA

Gene: INTS6, integrator complex subunit 6 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
INTS6 transcript variant 2	NM_001039937.2:c.391-8125… NM_001039937.2:c.391-8125_391-8123del	N/A	Intron Variant
INTS6 transcript variant 4	NM_001306091.2:c.-105-812… NM_001306091.2:c.-105-8125_-105-8123del	N/A	Intron Variant
INTS6 transcript variant 1	NM_012141.3:c.430-8125_43… NM_012141.3:c.430-8125_430-8123del	N/A	Intron Variant
INTS6 transcript variant 3	NM_001039938.2:c.	N/A	Genic Downstream Transcript Variant
INTS6 transcript variant X1	XM_011535040.4:c.430-8125… XM_011535040.4:c.430-8125_430-8123del	N/A	Intron Variant
INTS6 transcript variant X6	XM_047430264.1:c.-29-1416… XM_047430264.1:c.-29-14164_-29-14162del	N/A	Intron Variant
INTS6 transcript variant X7	XM_047430265.1:c.	N/A	Genic Upstream Transcript Variant
INTS6 transcript variant X2	XR_007063673.1:n.	N/A	Intron Variant
INTS6 transcript variant X3	XR_007063674.1:n.	N/A	Intron Variant
INTS6 transcript variant X4	XR_007063675.1:n.	N/A	Intron Variant
INTS6 transcript variant X5	XR_007063676.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₃=	delAAA	delAA	delA	dupA	dup(A)₄	dup(A)₅	dup(A)₁₀	dup(A)₁₁	dup(A)₁₃	ins(A)₂₃
GRCh38.p14 chr 13	NC_000013.11:g.51403606_51403618=	NC_000013.11:g.51403616_51403618del	NC_000013.11:g.51403617_51403618del	NC_000013.11:g.51403618del	NC_000013.11:g.51403618dup	NC_000013.11:g.51403615_51403618dup	NC_000013.11:g.51403614_51403618dup	NC_000013.11:g.51403609_51403618dup	NC_000013.11:g.51403608_51403618dup	NC_000013.11:g.51403606_51403618dup	NC_000013.11:g.51403618_51403619insAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 13	NC_000013.10:g.51977742_51977754=	NC_000013.10:g.51977752_51977754del	NC_000013.10:g.51977753_51977754del	NC_000013.10:g.51977754del	NC_000013.10:g.51977754dup	NC_000013.10:g.51977751_51977754dup	NC_000013.10:g.51977750_51977754dup	NC_000013.10:g.51977745_51977754dup	NC_000013.10:g.51977744_51977754dup	NC_000013.10:g.51977742_51977754dup	NC_000013.10:g.51977754_51977755insAAAAAAAAAAAAAAAAAAAAAAA
INTS6 transcript variant 2	NM_001039937.1:c.391-8123=	NM_001039937.1:c.391-8125_391-8123del	NM_001039937.1:c.391-8124_391-8123del	NM_001039937.1:c.391-8123del	NM_001039937.1:c.391-8123dup	NM_001039937.1:c.391-8126_391-8123dup	NM_001039937.1:c.391-8127_391-8123dup	NM_001039937.1:c.391-8132_391-8123dup	NM_001039937.1:c.391-8133_391-8123dup	NM_001039937.1:c.391-8135_391-8123dup	NM_001039937.1:c.391-8123_391-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant 2	NM_001039937.2:c.391-8123=	NM_001039937.2:c.391-8125_391-8123del	NM_001039937.2:c.391-8124_391-8123del	NM_001039937.2:c.391-8123del	NM_001039937.2:c.391-8123dup	NM_001039937.2:c.391-8126_391-8123dup	NM_001039937.2:c.391-8127_391-8123dup	NM_001039937.2:c.391-8132_391-8123dup	NM_001039937.2:c.391-8133_391-8123dup	NM_001039937.2:c.391-8135_391-8123dup	NM_001039937.2:c.391-8123_391-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant 4	NM_001306091.2:c.-105-8123=	NM_001306091.2:c.-105-8125_-105-8123del	NM_001306091.2:c.-105-8124_-105-8123del	NM_001306091.2:c.-105-8123del	NM_001306091.2:c.-105-8123dup	NM_001306091.2:c.-105-8126_-105-8123dup	NM_001306091.2:c.-105-8127_-105-8123dup	NM_001306091.2:c.-105-8132_-105-8123dup	NM_001306091.2:c.-105-8133_-105-8123dup	NM_001306091.2:c.-105-8135_-105-8123dup	NM_001306091.2:c.-105-8123_-105-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant 1	NM_012141.2:c.430-8123=	NM_012141.2:c.430-8125_430-8123del	NM_012141.2:c.430-8124_430-8123del	NM_012141.2:c.430-8123del	NM_012141.2:c.430-8123dup	NM_012141.2:c.430-8126_430-8123dup	NM_012141.2:c.430-8127_430-8123dup	NM_012141.2:c.430-8132_430-8123dup	NM_012141.2:c.430-8133_430-8123dup	NM_012141.2:c.430-8135_430-8123dup	NM_012141.2:c.430-8123_430-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant 1	NM_012141.3:c.430-8123=	NM_012141.3:c.430-8125_430-8123del	NM_012141.3:c.430-8124_430-8123del	NM_012141.3:c.430-8123del	NM_012141.3:c.430-8123dup	NM_012141.3:c.430-8126_430-8123dup	NM_012141.3:c.430-8127_430-8123dup	NM_012141.3:c.430-8132_430-8123dup	NM_012141.3:c.430-8133_430-8123dup	NM_012141.3:c.430-8135_430-8123dup	NM_012141.3:c.430-8123_430-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant X1	XM_005266339.1:c.430-8123=	XM_005266339.1:c.430-8125_430-8123del	XM_005266339.1:c.430-8124_430-8123del	XM_005266339.1:c.430-8123del	XM_005266339.1:c.430-8123dup	XM_005266339.1:c.430-8126_430-8123dup	XM_005266339.1:c.430-8127_430-8123dup	XM_005266339.1:c.430-8132_430-8123dup	XM_005266339.1:c.430-8133_430-8123dup	XM_005266339.1:c.430-8135_430-8123dup	XM_005266339.1:c.430-8123_430-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant X2	XM_005266340.1:c.-105-8123=	XM_005266340.1:c.-105-8125_-105-8123del	XM_005266340.1:c.-105-8124_-105-8123del	XM_005266340.1:c.-105-8123del	XM_005266340.1:c.-105-8123dup	XM_005266340.1:c.-105-8126_-105-8123dup	XM_005266340.1:c.-105-8127_-105-8123dup	XM_005266340.1:c.-105-8132_-105-8123dup	XM_005266340.1:c.-105-8133_-105-8123dup	XM_005266340.1:c.-105-8135_-105-8123dup	XM_005266340.1:c.-105-8123_-105-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant X3	XM_005266341.1:c.-772-8123=	XM_005266341.1:c.-772-8125_-772-8123del	XM_005266341.1:c.-772-8124_-772-8123del	XM_005266341.1:c.-772-8123del	XM_005266341.1:c.-772-8123dup	XM_005266341.1:c.-772-8126_-772-8123dup	XM_005266341.1:c.-772-8127_-772-8123dup	XM_005266341.1:c.-772-8132_-772-8123dup	XM_005266341.1:c.-772-8133_-772-8123dup	XM_005266341.1:c.-772-8135_-772-8123dup	XM_005266341.1:c.-772-8123_-772-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant X1	XM_011535040.4:c.430-8123=	XM_011535040.4:c.430-8125_430-8123del	XM_011535040.4:c.430-8124_430-8123del	XM_011535040.4:c.430-8123del	XM_011535040.4:c.430-8123dup	XM_011535040.4:c.430-8126_430-8123dup	XM_011535040.4:c.430-8127_430-8123dup	XM_011535040.4:c.430-8132_430-8123dup	XM_011535040.4:c.430-8133_430-8123dup	XM_011535040.4:c.430-8135_430-8123dup	XM_011535040.4:c.430-8123_430-8122insTTTTTTTTTTTTTTTTTTTTTTT
INTS6 transcript variant X6	XM_047430264.1:c.-29-14162=	XM_047430264.1:c.-29-14164_-29-14162del	XM_047430264.1:c.-29-14163_-29-14162del	XM_047430264.1:c.-29-14162del	XM_047430264.1:c.-29-14162dup	XM_047430264.1:c.-29-14165_-29-14162dup	XM_047430264.1:c.-29-14166_-29-14162dup	XM_047430264.1:c.-29-14171_-29-14162dup	XM_047430264.1:c.-29-14172_-29-14162dup	XM_047430264.1:c.-29-14174_-29-14162dup	XM_047430264.1:c.-29-14162_-29-14161insTTTTTTTTTTTTTTTTTTTTTTT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

18 SubSNP, 18 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	EVA_DECODE	ss3695305935	Jul 13, 2019 (153)
2	KOGIC	ss3973578334	Apr 27, 2020 (154)
3	KOGIC	ss3973578335	Apr 27, 2020 (154)
4	KOGIC	ss3973578336	Apr 27, 2020 (154)
5	GNOMAD	ss4265965168	Apr 26, 2021 (155)
6	GNOMAD	ss4265965169	Apr 26, 2021 (155)
7	GNOMAD	ss4265965170	Apr 26, 2021 (155)
8	GNOMAD	ss4265965174	Apr 26, 2021 (155)
9	GNOMAD	ss4265965175	Apr 26, 2021 (155)
10	TOPMED	ss4946534802	Apr 26, 2021 (155)
11	TOMMO_GENOMICS	ss5210027500	Apr 26, 2021 (155)
12	TOMMO_GENOMICS	ss5210027501	Apr 26, 2021 (155)
13	TOMMO_GENOMICS	ss5210027502	Apr 26, 2021 (155)
14	TOMMO_GENOMICS	ss5210027503	Apr 26, 2021 (155)
15	TOMMO_GENOMICS	ss5761912100	Oct 16, 2022 (156)
16	TOMMO_GENOMICS	ss5761912102	Oct 16, 2022 (156)
17	TOMMO_GENOMICS	ss5761912104	Oct 16, 2022 (156)
18	TOMMO_GENOMICS	ss5761912105	Oct 16, 2022 (156)
19	gnomAD - Genomes Submission ignored due to conflicting rows: Row 430922023 (NC_000013.11:51403605::A 42/102204) Row 430922024 (NC_000013.11:51403605::AAAAA 4/102236) Row 430922025 (NC_000013.11:51403605::AAAAAAAAAAA 49/102028)...	-	Apr 26, 2021 (155)
20	gnomAD - Genomes Submission ignored due to conflicting rows: Row 430922023 (NC_000013.11:51403605::A 42/102204) Row 430922024 (NC_000013.11:51403605::AAAAA 4/102236) Row 430922025 (NC_000013.11:51403605::AAAAAAAAAAA 49/102028)...	-	Apr 26, 2021 (155)
21	gnomAD - Genomes Submission ignored due to conflicting rows: Row 430922023 (NC_000013.11:51403605::A 42/102204) Row 430922024 (NC_000013.11:51403605::AAAAA 4/102236) Row 430922025 (NC_000013.11:51403605::AAAAAAAAAAA 49/102028)...	-	Apr 26, 2021 (155)
22	gnomAD - Genomes Submission ignored due to conflicting rows: Row 430922023 (NC_000013.11:51403605::A 42/102204) Row 430922024 (NC_000013.11:51403605::AAAAA 4/102236) Row 430922025 (NC_000013.11:51403605::AAAAAAAAAAA 49/102028)...	-	Apr 26, 2021 (155)
23	gnomAD - Genomes Submission ignored due to conflicting rows: Row 430922023 (NC_000013.11:51403605::A 42/102204) Row 430922024 (NC_000013.11:51403605::AAAAA 4/102236) Row 430922025 (NC_000013.11:51403605::AAAAAAAAAAA 49/102028)...	-	Apr 26, 2021 (155)
24	Korean Genome Project Submission ignored due to conflicting rows: Row 29956335 (NC_000013.11:51403605:A: 13/1832) Row 29956336 (NC_000013.11:51403606::AAAAAAAAAAA 3/1832) Row 29956337 (NC_000013.11:51403606::AAAAAAAAAAAAAAAAAAAAAAA 1/1832)	-	Apr 27, 2020 (154)
25	Korean Genome Project Submission ignored due to conflicting rows: Row 29956335 (NC_000013.11:51403605:A: 13/1832) Row 29956336 (NC_000013.11:51403606::AAAAAAAAAAA 3/1832) Row 29956337 (NC_000013.11:51403606::AAAAAAAAAAAAAAAAAAAAAAA 1/1832)	-	Apr 27, 2020 (154)
26	Korean Genome Project Submission ignored due to conflicting rows: Row 29956335 (NC_000013.11:51403605:A: 13/1832) Row 29956336 (NC_000013.11:51403606::AAAAAAAAAAA 3/1832) Row 29956337 (NC_000013.11:51403606::AAAAAAAAAAAAAAAAAAAAAAA 1/1832)	-	Apr 27, 2020 (154)
27	8.3KJPN Submission ignored due to conflicting rows: Row 67996807 (NC_000013.10:51977741:A: 84/16756) Row 67996808 (NC_000013.10:51977741::AAAAAAAAAAA 34/16756) Row 67996809 (NC_000013.10:51977741:AAA: 7/16756)...	-	Apr 26, 2021 (155)
28	8.3KJPN Submission ignored due to conflicting rows: Row 67996807 (NC_000013.10:51977741:A: 84/16756) Row 67996808 (NC_000013.10:51977741::AAAAAAAAAAA 34/16756) Row 67996809 (NC_000013.10:51977741:AAA: 7/16756)...	-	Apr 26, 2021 (155)
29	8.3KJPN Submission ignored due to conflicting rows: Row 67996807 (NC_000013.10:51977741:A: 84/16756) Row 67996808 (NC_000013.10:51977741::AAAAAAAAAAA 34/16756) Row 67996809 (NC_000013.10:51977741:AAA: 7/16756)...	-	Apr 26, 2021 (155)
30	8.3KJPN Submission ignored due to conflicting rows: Row 67996807 (NC_000013.10:51977741:A: 84/16756) Row 67996808 (NC_000013.10:51977741::AAAAAAAAAAA 34/16756) Row 67996809 (NC_000013.10:51977741:AAA: 7/16756)...	-	Apr 26, 2021 (155)
31	14KJPN Submission ignored due to conflicting rows: Row 95749204 (NC_000013.11:51403605:A: 108/27588) Row 95749206 (NC_000013.11:51403605::AAAAAAAAAAA 25/27588) Row 95749208 (NC_000013.11:51403605::AAAAAAAAAA 10/27588)...	-	Oct 16, 2022 (156)
32	14KJPN Submission ignored due to conflicting rows: Row 95749204 (NC_000013.11:51403605:A: 108/27588) Row 95749206 (NC_000013.11:51403605::AAAAAAAAAAA 25/27588) Row 95749208 (NC_000013.11:51403605::AAAAAAAAAA 10/27588)...	-	Oct 16, 2022 (156)
33	14KJPN Submission ignored due to conflicting rows: Row 95749204 (NC_000013.11:51403605:A: 108/27588) Row 95749206 (NC_000013.11:51403605::AAAAAAAAAAA 25/27588) Row 95749208 (NC_000013.11:51403605::AAAAAAAAAA 10/27588)...	-	Oct 16, 2022 (156)
34	14KJPN Submission ignored due to conflicting rows: Row 95749204 (NC_000013.11:51403605:A: 108/27588) Row 95749206 (NC_000013.11:51403605::AAAAAAAAAAA 25/27588) Row 95749208 (NC_000013.11:51403605::AAAAAAAAAA 10/27588)...	-	Oct 16, 2022 (156)
35	TopMed	NC_000013.11 - 51403606	Apr 26, 2021 (155)
36	ALFA	NC_000013.11 - 51403606	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5210027502	NC_000013.10:51977741:AAA:	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAA	(self)
ss4265965175	NC_000013.11:51403605:AAA:	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss5210027500	NC_000013.10:51977741:A:	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss3973578334, ss4265965174, ss5761912100	NC_000013.11:51403605:A:	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAA	(self)
ss4265965168	NC_000013.11:51403605::A	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
162080460, ss4946534802	NC_000013.11:51403605::AAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA	(self)
ss4265965169	NC_000013.11:51403605::AAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA	(self)
ss5210027503	NC_000013.10:51977741::AAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA	(self)
ss5761912104	NC_000013.11:51403605::AAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
ss3695305935	NC_000013.11:51403606::AAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA	(self)
ss5210027501	NC_000013.10:51977741::AAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss4265965170, ss5761912102	NC_000013.11:51403605::AAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
7834168661	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss3973578335	NC_000013.11:51403606::AAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA	(self)
ss5761912105	NC_000013.11:51403605::AAAAAAAAAAA… NC_000013.11:51403605::AAAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
ss3973578336	NC_000013.11:51403606::AAAAAAAAAAA… NC_000013.11:51403606::AAAAAAAAAAAAAAAAAAAAAAA	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3192864380	NC_000013.11:51403605:AA:	NC_000013.11:51403605:AAAAAAAAAAAA… NC_000013.11:51403605:AAAAAAAAAAAAA:AAAAAAAAAAA

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1156836396

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1156836396