Name: rs11446646
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11446646

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr5:170239399-170239410 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delAA / delA / dupA / dupAA / dupA…
delAA / delA / dupA / dupAA / dupAAA / dup(A)₄ / ins(A)₁₇
Variation Type: Indel Insertion and Deletion
Frequency: dupAA=0.2670 (1964/7355, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: C5orf58 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	7355	AAAAAAAAAAAA=0.6915	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0415, AAAAAAAAAAAAAA=0.2670, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000	0.593095	0.132192	0.274712	32
European	Sub	6411	AAAAAAAAAAAA=0.6470	AAAAAAAAAA=0.0000, AAAAAAAAAAA=0.0000, AAAAAAAAAAAAA=0.0476, AAAAAAAAAAAAAA=0.3054, AAAAAAAAAAAAAAA=0.0000, AAAAAAAAAAAAAAAA=0.0000	0.528625	0.152897	0.318478	32
African	Sub	602	AAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
African Others	Sub	26	AAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
African American	Sub	576	AAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
Asian	Sub	24	AAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	20	AAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	4	AAAAAAAAAAAA=1.0	AAAAAAAAAA=0.0, AAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAA=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	40	AAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	132	AAAAAAAAAAAA=1.000	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	16	AAAAAAAAAAAA=1.00	AAAAAAAAAA=0.00, AAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAA=0.00	1.0	0.0	0.0	N/A
Other	Sub	130	AAAAAAAAAAAA=0.954	AAAAAAAAAA=0.000, AAAAAAAAAAA=0.000, AAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAA=0.046, AAAAAAAAAAAAAAA=0.000, AAAAAAAAAAAAAAAA=0.000	0.938462	0.030769	0.030769	15

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	7355	(A)₁₂=0.6915	delAA=0.0000, delA=0.0000, dupA=0.0415, dupAA=0.2670, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	European	Sub	6411	(A)₁₂=0.6470	delAA=0.0000, delA=0.0000, dupA=0.0476, dupAA=0.3054, dupAAA=0.0000, dup(A)₄=0.0000
Allele Frequency Aggregator	African	Sub	602	(A)₁₂=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Latin American 2	Sub	132	(A)₁₂=1.000	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.000, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Other	Sub	130	(A)₁₂=0.954	delAA=0.000, delA=0.000, dupA=0.000, dupAA=0.046, dupAAA=0.000, dup(A)₄=0.000
Allele Frequency Aggregator	Latin American 1	Sub	40	(A)₁₂=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	Asian	Sub	24	(A)₁₂=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00
Allele Frequency Aggregator	South Asian	Sub	16	(A)₁₂=1.00	delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dupAAA=0.00, dup(A)₄=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 5	NC_000005.10:g.170239409_170239410del
GRCh38.p14 chr 5	NC_000005.10:g.170239410del
GRCh38.p14 chr 5	NC_000005.10:g.170239410dup
GRCh38.p14 chr 5	NC_000005.10:g.170239409_170239410dup
GRCh38.p14 chr 5	NC_000005.10:g.170239408_170239410dup
GRCh38.p14 chr 5	NC_000005.10:g.170239407_170239410dup
GRCh38.p14 chr 5	NC_000005.10:g.170239410_170239411insAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 5	NC_000005.9:g.169666413_169666414del
GRCh37.p13 chr 5	NC_000005.9:g.169666414del
GRCh37.p13 chr 5	NC_000005.9:g.169666414dup
GRCh37.p13 chr 5	NC_000005.9:g.169666413_169666414dup
GRCh37.p13 chr 5	NC_000005.9:g.169666412_169666414dup
GRCh37.p13 chr 5	NC_000005.9:g.169666411_169666414dup
GRCh37.p13 chr 5	NC_000005.9:g.169666414_169666415insAAAAAAAAAAAAAAAAA

Gene: C5orf58, chromosome 5 open reading frame 58 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
C5orf58 transcript variant 1	NM_001102609.3:c.94+4339_… NM_001102609.3:c.94+4339_94+4340del	N/A	Intron Variant
C5orf58 transcript variant 2	NM_001305393.2:c.94+4339_… NM_001305393.2:c.94+4339_94+4340del	N/A	Intron Variant
C5orf58 transcript variant 3	NM_001305394.2:c.94+4339_… NM_001305394.2:c.94+4339_94+4340del	N/A	Intron Variant
C5orf58 transcript variant 7	NR_131091.3:n.	N/A	Intron Variant
C5orf58 transcript variant 8	NR_131092.3:n.	N/A	Intron Variant
C5orf58 transcript variant 4	NR_161261.1:n.	N/A	Intron Variant
C5orf58 transcript variant 6	NR_161262.1:n.	N/A	Intron Variant
C5orf58 transcript variant 5	NR_161263.1:n.	N/A	Intron Variant
C5orf58 transcript variant X2	XM_017009032.2:c.157+4339… XM_017009032.2:c.157+4339_157+4340del	N/A	Intron Variant
C5orf58 transcript variant X3	XM_017009033.2:c.157+4339… XM_017009033.2:c.157+4339_157+4340del	N/A	Intron Variant
C5orf58 transcript variant X1	XM_047416711.1:c.157+4339… XM_047416711.1:c.157+4339_157+4340del	N/A	Intron Variant
C5orf58 transcript variant X4	XM_047416712.1:c.94+4339_… XM_047416712.1:c.94+4339_94+4340del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(A)₁₂=	delAA	delA	dupA	dupAA	dupAAA	dup(A)₄	ins(A)₁₇
GRCh38.p14 chr 5	NC_000005.10:g.170239399_170239410=	NC_000005.10:g.170239409_170239410del	NC_000005.10:g.170239410del	NC_000005.10:g.170239410dup	NC_000005.10:g.170239409_170239410dup	NC_000005.10:g.170239408_170239410dup	NC_000005.10:g.170239407_170239410dup	NC_000005.10:g.170239410_170239411insAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 5	NC_000005.9:g.169666403_169666414=	NC_000005.9:g.169666413_169666414del	NC_000005.9:g.169666414del	NC_000005.9:g.169666414dup	NC_000005.9:g.169666413_169666414dup	NC_000005.9:g.169666412_169666414dup	NC_000005.9:g.169666411_169666414dup	NC_000005.9:g.169666414_169666415insAAAAAAAAAAAAAAAAA
C5orf58 transcript	NM_001102609.1:c.157+4329=	NM_001102609.1:c.157+4339_157+4340del	NM_001102609.1:c.157+4340del	NM_001102609.1:c.157+4340dup	NM_001102609.1:c.157+4339_157+4340dup	NM_001102609.1:c.157+4338_157+4340dup	NM_001102609.1:c.157+4337_157+4340dup	NM_001102609.1:c.157+4340_157+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant 1	NM_001102609.3:c.94+4329=	NM_001102609.3:c.94+4339_94+4340del	NM_001102609.3:c.94+4340del	NM_001102609.3:c.94+4340dup	NM_001102609.3:c.94+4339_94+4340dup	NM_001102609.3:c.94+4338_94+4340dup	NM_001102609.3:c.94+4337_94+4340dup	NM_001102609.3:c.94+4340_94+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant 2	NM_001305393.2:c.94+4329=	NM_001305393.2:c.94+4339_94+4340del	NM_001305393.2:c.94+4340del	NM_001305393.2:c.94+4340dup	NM_001305393.2:c.94+4339_94+4340dup	NM_001305393.2:c.94+4338_94+4340dup	NM_001305393.2:c.94+4337_94+4340dup	NM_001305393.2:c.94+4340_94+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant 3	NM_001305394.2:c.94+4329=	NM_001305394.2:c.94+4339_94+4340del	NM_001305394.2:c.94+4340del	NM_001305394.2:c.94+4340dup	NM_001305394.2:c.94+4339_94+4340dup	NM_001305394.2:c.94+4338_94+4340dup	NM_001305394.2:c.94+4337_94+4340dup	NM_001305394.2:c.94+4340_94+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant X1	XM_005265817.1:c.274+4329=	XM_005265817.1:c.274+4339_274+4340del	XM_005265817.1:c.274+4340del	XM_005265817.1:c.274+4340dup	XM_005265817.1:c.274+4339_274+4340dup	XM_005265817.1:c.274+4338_274+4340dup	XM_005265817.1:c.274+4337_274+4340dup	XM_005265817.1:c.274+4340_274+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant X2	XM_017009032.2:c.157+4329=	XM_017009032.2:c.157+4339_157+4340del	XM_017009032.2:c.157+4340del	XM_017009032.2:c.157+4340dup	XM_017009032.2:c.157+4339_157+4340dup	XM_017009032.2:c.157+4338_157+4340dup	XM_017009032.2:c.157+4337_157+4340dup	XM_017009032.2:c.157+4340_157+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant X3	XM_017009033.2:c.157+4329=	XM_017009033.2:c.157+4339_157+4340del	XM_017009033.2:c.157+4340del	XM_017009033.2:c.157+4340dup	XM_017009033.2:c.157+4339_157+4340dup	XM_017009033.2:c.157+4338_157+4340dup	XM_017009033.2:c.157+4337_157+4340dup	XM_017009033.2:c.157+4340_157+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant X1	XM_047416711.1:c.157+4329=	XM_047416711.1:c.157+4339_157+4340del	XM_047416711.1:c.157+4340del	XM_047416711.1:c.157+4340dup	XM_047416711.1:c.157+4339_157+4340dup	XM_047416711.1:c.157+4338_157+4340dup	XM_047416711.1:c.157+4337_157+4340dup	XM_047416711.1:c.157+4340_157+4341insAAAAAAAAAAAAAAAAA
C5orf58 transcript variant X4	XM_047416712.1:c.94+4329=	XM_047416712.1:c.94+4339_94+4340del	XM_047416712.1:c.94+4340del	XM_047416712.1:c.94+4340dup	XM_047416712.1:c.94+4339_94+4340dup	XM_047416712.1:c.94+4338_94+4340dup	XM_047416712.1:c.94+4337_94+4340dup	XM_047416712.1:c.94+4340_94+4341insAAAAAAAAAAAAAAAAA

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

59 SubSNP, 26 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss42624385	Mar 15, 2006 (126)
2	HGSV	ss82986445	Dec 14, 2007 (130)
3	HUMANGENOME_JCVI	ss98685518	Feb 04, 2009 (130)
4	GMI	ss287785017	Dec 03, 2013 (138)
5	GMI	ss288673623	May 04, 2012 (137)
6	PJP	ss295256324	May 09, 2011 (135)
7	SSMP	ss663581979	Apr 01, 2015 (144)
8	BILGI_BIOE	ss666336878	Apr 25, 2013 (138)
9	DDI	ss1536488117	Apr 01, 2015 (144)
10	EVA_UK10K_ALSPAC	ss1704971226	Apr 01, 2015 (144)
11	EVA_UK10K_ALSPAC	ss1704971228	Apr 01, 2015 (144)
12	EVA_UK10K_TWINSUK	ss1704971230	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1704971232	Apr 01, 2015 (144)
14	SWEGEN	ss2998227913	Nov 08, 2017 (151)
15	SWEGEN	ss2998227914	Nov 08, 2017 (151)
16	MCHAISSO	ss3064184761	Nov 08, 2017 (151)
17	URBANLAB	ss3648226464	Oct 12, 2018 (152)
18	EVA_DECODE	ss3716236349	Jul 13, 2019 (153)
19	EVA_DECODE	ss3716236350	Jul 13, 2019 (153)
20	EVA_DECODE	ss3716236351	Jul 13, 2019 (153)
21	EVA_DECODE	ss3716236352	Jul 13, 2019 (153)
22	ACPOP	ss3733049614	Jul 13, 2019 (153)
23	ACPOP	ss3733049615	Jul 13, 2019 (153)
24	ACPOP	ss3733049616	Jul 13, 2019 (153)
25	PACBIO	ss3785322431	Jul 13, 2019 (153)
26	PACBIO	ss3790694179	Jul 13, 2019 (153)
27	PACBIO	ss3795571302	Jul 13, 2019 (153)
28	KHV_HUMAN_GENOMES	ss3807562872	Jul 13, 2019 (153)
29	EVA	ss3829639352	Apr 26, 2020 (154)
30	EVA	ss3838292922	Apr 26, 2020 (154)
31	EVA	ss3843736803	Apr 26, 2020 (154)
32	KOGIC	ss3958157422	Apr 26, 2020 (154)
33	KOGIC	ss3958157423	Apr 26, 2020 (154)
34	KOGIC	ss3958157424	Apr 26, 2020 (154)
35	GNOMAD	ss4134119503	Apr 26, 2021 (155)
36	GNOMAD	ss4134119504	Apr 26, 2021 (155)
37	GNOMAD	ss4134119505	Apr 26, 2021 (155)
38	GNOMAD	ss4134119506	Apr 26, 2021 (155)
39	GNOMAD	ss4134119507	Apr 26, 2021 (155)
40	GNOMAD	ss4134119508	Apr 26, 2021 (155)
41	GNOMAD	ss4134119509	Apr 26, 2021 (155)
42	TOMMO_GENOMICS	ss5175372158	Apr 26, 2021 (155)
43	TOMMO_GENOMICS	ss5175372159	Apr 26, 2021 (155)
44	TOMMO_GENOMICS	ss5175372160	Apr 26, 2021 (155)
45	TOMMO_GENOMICS	ss5175372161	Apr 26, 2021 (155)
46	1000G_HIGH_COVERAGE	ss5266794044	Oct 13, 2022 (156)
47	1000G_HIGH_COVERAGE	ss5266794045	Oct 13, 2022 (156)
48	1000G_HIGH_COVERAGE	ss5266794046	Oct 13, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5266794047	Oct 13, 2022 (156)
50	HUGCELL_USP	ss5464665753	Oct 13, 2022 (156)
51	HUGCELL_USP	ss5464665754	Oct 13, 2022 (156)
52	HUGCELL_USP	ss5464665755	Oct 13, 2022 (156)
53	TOMMO_GENOMICS	ss5712803114	Oct 13, 2022 (156)
54	TOMMO_GENOMICS	ss5712803115	Oct 13, 2022 (156)
55	TOMMO_GENOMICS	ss5712803116	Oct 13, 2022 (156)
56	TOMMO_GENOMICS	ss5712803117	Oct 13, 2022 (156)
57	EVA	ss5836014109	Oct 13, 2022 (156)
58	EVA	ss5836014110	Oct 13, 2022 (156)
59	EVA	ss5855128319	Oct 13, 2022 (156)
60	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 16713377 (NC_000005.9:169666402::AA 1787/3854) Row 16713378 (NC_000005.9:169666402::AAA 110/3854)	-	Oct 12, 2018 (152)
61	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 16713377 (NC_000005.9:169666402::AA 1787/3854) Row 16713378 (NC_000005.9:169666402::AAA 110/3854)	-	Oct 12, 2018 (152)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
63	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
64	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
65	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
66	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
67	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
68	gnomAD - Genomes Submission ignored due to conflicting rows: Row 212334765 (NC_000005.10:170239398::A 24372/131704) Row 212334766 (NC_000005.10:170239398::AA 43688/131506) Row 212334767 (NC_000005.10:170239398::AAA 260/131828)...	-	Apr 26, 2021 (155)
69	Korean Genome Project Submission ignored due to conflicting rows: Row 14535423 (NC_000005.10:170239398::A 157/1832) Row 14535424 (NC_000005.10:170239398::AA 570/1832) Row 14535425 (NC_000005.10:170239398::AAA 28/1832)	-	Apr 26, 2020 (154)
70	Korean Genome Project Submission ignored due to conflicting rows: Row 14535423 (NC_000005.10:170239398::A 157/1832) Row 14535424 (NC_000005.10:170239398::AA 570/1832) Row 14535425 (NC_000005.10:170239398::AAA 28/1832)	-	Apr 26, 2020 (154)
71	Korean Genome Project Submission ignored due to conflicting rows: Row 14535423 (NC_000005.10:170239398::A 157/1832) Row 14535424 (NC_000005.10:170239398::AA 570/1832) Row 14535425 (NC_000005.10:170239398::AAA 28/1832)	-	Apr 26, 2020 (154)
72	Northern Sweden Submission ignored due to conflicting rows: Row 6334479 (NC_000005.9:169666402::AA 242/594) Row 6334480 (NC_000005.9:169666402::A 52/594) Row 6334481 (NC_000005.9:169666402:A: 1/594)	-	Jul 13, 2019 (153)
73	Northern Sweden Submission ignored due to conflicting rows: Row 6334479 (NC_000005.9:169666402::AA 242/594) Row 6334480 (NC_000005.9:169666402::A 52/594) Row 6334481 (NC_000005.9:169666402:A: 1/594)	-	Jul 13, 2019 (153)
74	Northern Sweden Submission ignored due to conflicting rows: Row 6334479 (NC_000005.9:169666402::AA 242/594) Row 6334480 (NC_000005.9:169666402::A 52/594) Row 6334481 (NC_000005.9:169666402:A: 1/594)	-	Jul 13, 2019 (153)
75	8.3KJPN Submission ignored due to conflicting rows: Row 33341465 (NC_000005.9:169666402::AA 6521/16760) Row 33341466 (NC_000005.9:169666402:A: 3/16760) Row 33341467 (NC_000005.9:169666402::A 712/16760)...	-	Apr 26, 2021 (155)
76	8.3KJPN Submission ignored due to conflicting rows: Row 33341465 (NC_000005.9:169666402::AA 6521/16760) Row 33341466 (NC_000005.9:169666402:A: 3/16760) Row 33341467 (NC_000005.9:169666402::A 712/16760)...	-	Apr 26, 2021 (155)
77	8.3KJPN Submission ignored due to conflicting rows: Row 33341465 (NC_000005.9:169666402::AA 6521/16760) Row 33341466 (NC_000005.9:169666402:A: 3/16760) Row 33341467 (NC_000005.9:169666402::A 712/16760)...	-	Apr 26, 2021 (155)
78	8.3KJPN Submission ignored due to conflicting rows: Row 33341465 (NC_000005.9:169666402::AA 6521/16760) Row 33341466 (NC_000005.9:169666402:A: 3/16760) Row 33341467 (NC_000005.9:169666402::A 712/16760)...	-	Apr 26, 2021 (155)
79	14KJPN Submission ignored due to conflicting rows: Row 46640218 (NC_000005.10:170239398::A 1163/28258) Row 46640219 (NC_000005.10:170239398::AA 10923/28258) Row 46640220 (NC_000005.10:170239398::AAA 302/28258)...	-	Oct 13, 2022 (156)
80	14KJPN Submission ignored due to conflicting rows: Row 46640218 (NC_000005.10:170239398::A 1163/28258) Row 46640219 (NC_000005.10:170239398::AA 10923/28258) Row 46640220 (NC_000005.10:170239398::AAA 302/28258)...	-	Oct 13, 2022 (156)
81	14KJPN Submission ignored due to conflicting rows: Row 46640218 (NC_000005.10:170239398::A 1163/28258) Row 46640219 (NC_000005.10:170239398::AA 10923/28258) Row 46640220 (NC_000005.10:170239398::AAA 302/28258)...	-	Oct 13, 2022 (156)
82	14KJPN Submission ignored due to conflicting rows: Row 46640218 (NC_000005.10:170239398::A 1163/28258) Row 46640219 (NC_000005.10:170239398::AA 10923/28258) Row 46640220 (NC_000005.10:170239398::AAA 302/28258)...	-	Oct 13, 2022 (156)
83	UK 10K study - Twins Submission ignored due to conflicting rows: Row 16713377 (NC_000005.9:169666402::AA 1697/3708) Row 16713378 (NC_000005.9:169666402::AAA 126/3708)	-	Oct 12, 2018 (152)
84	UK 10K study - Twins Submission ignored due to conflicting rows: Row 16713377 (NC_000005.9:169666402::AA 1697/3708) Row 16713378 (NC_000005.9:169666402::AAA 126/3708)	-	Oct 12, 2018 (152)
85	ALFA	NC_000005.10 - 170239399	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs72268417	May 11, 2012 (137)
rs144776458	May 11, 2012 (137)
rs143518844	Oct 11, 2011 (135)
rs35450454	May 23, 2006 (127)
rs57865140	May 24, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4134119509	NC_000005.10:170239398:AA:	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAA	(self)
ss3733049616, ss5175372159	NC_000005.9:169666402:A:	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss3716236352, ss4134119508, ss5266794047, ss5712803117	NC_000005.10:170239398:A:	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAA	(self)
ss288673623	NC_000005.8:169598992::A	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss2998227914, ss3733049615, ss3829639352, ss5175372160	NC_000005.9:169666402::A	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3958157422, ss4134119503, ss5266794045, ss5464665754, ss5712803114	NC_000005.10:170239398::A	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss3716236351	NC_000005.10:170239399::A	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss82986445	NT_023133.13:14477687::A	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAA	(self)
ss295256324	NC_000005.8:169598991::AA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss663581979, ss666336878, ss1536488117, ss1704971226, ss1704971230, ss2998227913, ss3733049614, ss3785322431, ss3790694179, ss3795571302, ss3838292922, ss5175372158, ss5836014109	NC_000005.9:169666402::AA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3064184761, ss3648226464, ss3807562872, ss3843736803, ss3958157423, ss4134119504, ss5266794044, ss5464665753, ss5712803115, ss5855128319	NC_000005.10:170239398::AA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss3716236350	NC_000005.10:170239399::AA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss42624385, ss98685518, ss287785017	NT_023133.13:14477687::AA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAA	(self)
ss1704971228, ss1704971232, ss5175372161, ss5836014110	NC_000005.9:169666402::AAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3958157424, ss4134119505, ss5266794046, ss5464665755, ss5712803116	NC_000005.10:170239398::AAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss3716236349	NC_000005.10:170239399::AAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAA	(self)
ss4134119506	NC_000005.10:170239398::AAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
12941743303	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAAA	(self)
ss4134119507	NC_000005.10:170239398::AAAAAAAAAA… NC_000005.10:170239398::AAAAAAAAAAAAAAAAA	NC_000005.10:170239398:AAAAAAAAAAA… NC_000005.10:170239398:AAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11446646

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11446646