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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11348370

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr4:169580495-169580516 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
del(A)14 / del(A)13 / del(A)12 / d…

del(A)14 / del(A)13 / del(A)12 / del(A)10 / del(A)9 / del(A)5 / del(A)4 / delAAA / delAA / delA / dupA / dupAA / dupAAA / dup(A)4 / dup(A)5 / dup(A)7 / dup(A)8 / ins(A)24 / ins(A)34

Variation Type
Indel Insertion and Deletion
Frequency
(A)22=0.4121 (2064/5008, 1000G)
del(A)14=0.00 (0/72, ALFA)
del(A)13=0.00 (0/72, ALFA) (+ 12 more)
del(A)12=0.00 (0/72, ALFA)
del(A)10=0.00 (0/72, ALFA)
del(A)9=0.00 (0/72, ALFA)
del(A)5=0.00 (0/72, ALFA)
del(A)4=0.00 (0/72, ALFA)
delAAA=0.00 (0/72, ALFA)
delAA=0.00 (0/72, ALFA)
delA=0.00 (0/72, ALFA)
dupA=0.00 (0/72, ALFA)
dupAA=0.00 (0/72, ALFA)
dup(A)5=0.00 (0/72, ALFA)
(A)22=0.38 (12/32, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
NEK1 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 72 AAAAAAAAAAAAAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
European Sub 46 AAAAAAAAAAAAAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
African Sub 24 AAAAAAAAAAAAAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
African Others Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A
African American Sub 24 AAAAAAAAAAAAAAAAAAAAAA=1.00 AAAAAAAA=0.00, AAAAAAAAA=0.00, AAAAAAAAAA=0.00, AAAAAAAAAAAA=0.00, AAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAA=0.00, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.00 1.0 0.0 0.0 N/A
Asian Sub 2 AAAAAAAAAAAAAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
East Asian Sub 2 AAAAAAAAAAAAAAAAAAAAAA=1.0 AAAAAAAA=0.0, AAAAAAAAA=0.0, AAAAAAAAAA=0.0, AAAAAAAAAAAA=0.0, AAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAAA=0.0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0.0 1.0 0.0 0.0 N/A
Other Asian Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A
Latin American 1 Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A
Latin American 2 Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A
South Asian Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A
Other Sub 0 AAAAAAAAAAAAAAAAAAAAAA=0 AAAAAAAA=0, AAAAAAAAA=0, AAAAAAAAAA=0, AAAAAAAAAAAA=0, AAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAA=0, AAAAAAAAAAAAAAAAAAAAAAAAAAA=0 0 0 0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
1000Genomes Global Study-wide 5008 (A)22=0.4121 delA=0.5879
1000Genomes African Sub 1322 (A)22=0.6067 delA=0.3933
1000Genomes East Asian Sub 1008 (A)22=0.3155 delA=0.6845
1000Genomes Europe Sub 1006 (A)22=0.3827 delA=0.6173
1000Genomes South Asian Sub 978 (A)22=0.281 delA=0.719
1000Genomes American Sub 694 (A)22=0.409 delA=0.591
Allele Frequency Aggregator Total Global 72 (A)22=1.00 del(A)14=0.00, del(A)13=0.00, del(A)12=0.00, del(A)10=0.00, del(A)9=0.00, del(A)5=0.00, del(A)4=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dup(A)5=0.00
Allele Frequency Aggregator European Sub 46 (A)22=1.00 del(A)14=0.00, del(A)13=0.00, del(A)12=0.00, del(A)10=0.00, del(A)9=0.00, del(A)5=0.00, del(A)4=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dup(A)5=0.00
Allele Frequency Aggregator African Sub 24 (A)22=1.00 del(A)14=0.00, del(A)13=0.00, del(A)12=0.00, del(A)10=0.00, del(A)9=0.00, del(A)5=0.00, del(A)4=0.00, delAAA=0.00, delAA=0.00, delA=0.00, dupA=0.00, dupAA=0.00, dup(A)5=0.00
Allele Frequency Aggregator Asian Sub 2 (A)22=1.0 del(A)14=0.0, del(A)13=0.0, del(A)12=0.0, del(A)10=0.0, del(A)9=0.0, del(A)5=0.0, del(A)4=0.0, delAAA=0.0, delAA=0.0, delA=0.0, dupA=0.0, dupAA=0.0, dup(A)5=0.0
Allele Frequency Aggregator Latin American 1 Sub 0 (A)22=0 del(A)14=0, del(A)13=0, del(A)12=0, del(A)10=0, del(A)9=0, del(A)5=0, del(A)4=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0, dup(A)5=0
Allele Frequency Aggregator Latin American 2 Sub 0 (A)22=0 del(A)14=0, del(A)13=0, del(A)12=0, del(A)10=0, del(A)9=0, del(A)5=0, del(A)4=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0, dup(A)5=0
Allele Frequency Aggregator South Asian Sub 0 (A)22=0 del(A)14=0, del(A)13=0, del(A)12=0, del(A)10=0, del(A)9=0, del(A)5=0, del(A)4=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0, dup(A)5=0
Allele Frequency Aggregator Other Sub 0 (A)22=0 del(A)14=0, del(A)13=0, del(A)12=0, del(A)10=0, del(A)9=0, del(A)5=0, del(A)4=0, delAAA=0, delAA=0, delA=0, dupA=0, dupAA=0, dup(A)5=0
The Danish reference pan genome Danish Study-wide 32 (A)22=0.38 delA=0.62
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 4 NC_000004.12:g.169580503_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580504_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580505_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580507_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580508_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580512_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580513_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580514_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580515_169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580516del
GRCh38.p14 chr 4 NC_000004.12:g.169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580515_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580514_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580513_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580512_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580510_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580509_169580516dup
GRCh38.p14 chr 4 NC_000004.12:g.169580516_169580517insAAAAAAAAAAAAAAAAAAAAAAAA
GRCh38.p14 chr 4 NC_000004.12:g.169580516_169580517insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 4 NC_000004.11:g.170501654_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501655_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501656_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501658_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501659_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501663_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501664_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501665_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501666_170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501667del
GRCh37.p13 chr 4 NC_000004.11:g.170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501666_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501665_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501664_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501663_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501661_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501660_170501667dup
GRCh37.p13 chr 4 NC_000004.11:g.170501667_170501668insAAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 4 NC_000004.11:g.170501667_170501668insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
NEK1 RefSeqGene NG_027982.1:g.37120_37133del
NEK1 RefSeqGene NG_027982.1:g.37121_37133del
NEK1 RefSeqGene NG_027982.1:g.37122_37133del
NEK1 RefSeqGene NG_027982.1:g.37124_37133del
NEK1 RefSeqGene NG_027982.1:g.37125_37133del
NEK1 RefSeqGene NG_027982.1:g.37129_37133del
NEK1 RefSeqGene NG_027982.1:g.37130_37133del
NEK1 RefSeqGene NG_027982.1:g.37131_37133del
NEK1 RefSeqGene NG_027982.1:g.37132_37133del
NEK1 RefSeqGene NG_027982.1:g.37133del
NEK1 RefSeqGene NG_027982.1:g.37133dup
NEK1 RefSeqGene NG_027982.1:g.37132_37133dup
NEK1 RefSeqGene NG_027982.1:g.37131_37133dup
NEK1 RefSeqGene NG_027982.1:g.37130_37133dup
NEK1 RefSeqGene NG_027982.1:g.37129_37133dup
NEK1 RefSeqGene NG_027982.1:g.37127_37133dup
NEK1 RefSeqGene NG_027982.1:g.37126_37133dup
NEK1 RefSeqGene NG_027982.1:g.37133_37134insTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 RefSeqGene NG_027982.1:g.37133_37134insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene: NEK1, NIMA related kinase 1 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
NEK1 transcript variant 1 NM_001199397.3:c.868+334_…

NM_001199397.3:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 3 NM_001199398.3:c.868+334_…

NM_001199398.3:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 4 NM_001199399.3:c.868+334_…

NM_001199399.3:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 5 NM_001199400.3:c.868+334_…

NM_001199400.3:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 6 NM_001374418.1:c.868+334_…

NM_001374418.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 7 NM_001374419.1:c.868+334_…

NM_001374419.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 8 NM_001374420.1:c.868+334_…

NM_001374420.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 9 NM_001374421.1:c.868+334_…

NM_001374421.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 10 NM_001374422.1:c.868+334_…

NM_001374422.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 11 NM_001374423.1:c.868+334_…

NM_001374423.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 2 NM_012224.4:c.868+334_868…

NM_012224.4:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant 12 NR_164630.1:n. N/A Intron Variant
NEK1 transcript variant 13 NR_164631.1:n. N/A Intron Variant
NEK1 transcript variant X3 XM_011532004.2:c.868+334_…

XM_011532004.2:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X12 XM_011532005.3:c.868+334_…

XM_011532005.3:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X1 XM_047415731.1:c.868+334_…

XM_047415731.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X2 XM_047415732.1:c.868+334_…

XM_047415732.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X4 XM_047415733.1:c.868+334_…

XM_047415733.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X5 XM_047415734.1:c.868+334_…

XM_047415734.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X6 XM_047415735.1:c.868+334_…

XM_047415735.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X7 XM_047415736.1:c.868+334_…

XM_047415736.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X8 XM_047415737.1:c.247+334_…

XM_047415737.1:c.247+334_247+347del

N/A Intron Variant
NEK1 transcript variant X9 XM_047415738.1:c.247+334_…

XM_047415738.1:c.247+334_247+347del

N/A Intron Variant
NEK1 transcript variant X10 XM_047415739.1:c.247+334_…

XM_047415739.1:c.247+334_247+347del

N/A Intron Variant
NEK1 transcript variant X11 XM_047415740.1:c.868+334_…

XM_047415740.1:c.868+334_868+347del

N/A Intron Variant
NEK1 transcript variant X13 XM_047415741.1:c.868+334_…

XM_047415741.1:c.868+334_868+347del

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (A)22= del(A)14 del(A)13 del(A)12 del(A)10 del(A)9 del(A)5 del(A)4 delAAA delAA delA dupA dupAA dupAAA dup(A)4 dup(A)5 dup(A)7 dup(A)8 ins(A)24 ins(A)34
GRCh38.p14 chr 4 NC_000004.12:g.169580495_169580516= NC_000004.12:g.169580503_169580516del NC_000004.12:g.169580504_169580516del NC_000004.12:g.169580505_169580516del NC_000004.12:g.169580507_169580516del NC_000004.12:g.169580508_169580516del NC_000004.12:g.169580512_169580516del NC_000004.12:g.169580513_169580516del NC_000004.12:g.169580514_169580516del NC_000004.12:g.169580515_169580516del NC_000004.12:g.169580516del NC_000004.12:g.169580516dup NC_000004.12:g.169580515_169580516dup NC_000004.12:g.169580514_169580516dup NC_000004.12:g.169580513_169580516dup NC_000004.12:g.169580512_169580516dup NC_000004.12:g.169580510_169580516dup NC_000004.12:g.169580509_169580516dup NC_000004.12:g.169580516_169580517insAAAAAAAAAAAAAAAAAAAAAAAA NC_000004.12:g.169580516_169580517insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
GRCh37.p13 chr 4 NC_000004.11:g.170501646_170501667= NC_000004.11:g.170501654_170501667del NC_000004.11:g.170501655_170501667del NC_000004.11:g.170501656_170501667del NC_000004.11:g.170501658_170501667del NC_000004.11:g.170501659_170501667del NC_000004.11:g.170501663_170501667del NC_000004.11:g.170501664_170501667del NC_000004.11:g.170501665_170501667del NC_000004.11:g.170501666_170501667del NC_000004.11:g.170501667del NC_000004.11:g.170501667dup NC_000004.11:g.170501666_170501667dup NC_000004.11:g.170501665_170501667dup NC_000004.11:g.170501664_170501667dup NC_000004.11:g.170501663_170501667dup NC_000004.11:g.170501661_170501667dup NC_000004.11:g.170501660_170501667dup NC_000004.11:g.170501667_170501668insAAAAAAAAAAAAAAAAAAAAAAAA NC_000004.11:g.170501667_170501668insAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
NEK1 RefSeqGene NG_027982.1:g.37112_37133= NG_027982.1:g.37120_37133del NG_027982.1:g.37121_37133del NG_027982.1:g.37122_37133del NG_027982.1:g.37124_37133del NG_027982.1:g.37125_37133del NG_027982.1:g.37129_37133del NG_027982.1:g.37130_37133del NG_027982.1:g.37131_37133del NG_027982.1:g.37132_37133del NG_027982.1:g.37133del NG_027982.1:g.37133dup NG_027982.1:g.37132_37133dup NG_027982.1:g.37131_37133dup NG_027982.1:g.37130_37133dup NG_027982.1:g.37129_37133dup NG_027982.1:g.37127_37133dup NG_027982.1:g.37126_37133dup NG_027982.1:g.37133_37134insTTTTTTTTTTTTTTTTTTTTTTTT NG_027982.1:g.37133_37134insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 1 NM_001199397.1:c.868+347= NM_001199397.1:c.868+334_868+347del NM_001199397.1:c.868+335_868+347del NM_001199397.1:c.868+336_868+347del NM_001199397.1:c.868+338_868+347del NM_001199397.1:c.868+339_868+347del NM_001199397.1:c.868+343_868+347del NM_001199397.1:c.868+344_868+347del NM_001199397.1:c.868+345_868+347del NM_001199397.1:c.868+346_868+347del NM_001199397.1:c.868+347del NM_001199397.1:c.868+347dup NM_001199397.1:c.868+346_868+347dup NM_001199397.1:c.868+345_868+347dup NM_001199397.1:c.868+344_868+347dup NM_001199397.1:c.868+343_868+347dup NM_001199397.1:c.868+341_868+347dup NM_001199397.1:c.868+340_868+347dup NM_001199397.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199397.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 1 NM_001199397.3:c.868+347= NM_001199397.3:c.868+334_868+347del NM_001199397.3:c.868+335_868+347del NM_001199397.3:c.868+336_868+347del NM_001199397.3:c.868+338_868+347del NM_001199397.3:c.868+339_868+347del NM_001199397.3:c.868+343_868+347del NM_001199397.3:c.868+344_868+347del NM_001199397.3:c.868+345_868+347del NM_001199397.3:c.868+346_868+347del NM_001199397.3:c.868+347del NM_001199397.3:c.868+347dup NM_001199397.3:c.868+346_868+347dup NM_001199397.3:c.868+345_868+347dup NM_001199397.3:c.868+344_868+347dup NM_001199397.3:c.868+343_868+347dup NM_001199397.3:c.868+341_868+347dup NM_001199397.3:c.868+340_868+347dup NM_001199397.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199397.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 3 NM_001199398.1:c.868+347= NM_001199398.1:c.868+334_868+347del NM_001199398.1:c.868+335_868+347del NM_001199398.1:c.868+336_868+347del NM_001199398.1:c.868+338_868+347del NM_001199398.1:c.868+339_868+347del NM_001199398.1:c.868+343_868+347del NM_001199398.1:c.868+344_868+347del NM_001199398.1:c.868+345_868+347del NM_001199398.1:c.868+346_868+347del NM_001199398.1:c.868+347del NM_001199398.1:c.868+347dup NM_001199398.1:c.868+346_868+347dup NM_001199398.1:c.868+345_868+347dup NM_001199398.1:c.868+344_868+347dup NM_001199398.1:c.868+343_868+347dup NM_001199398.1:c.868+341_868+347dup NM_001199398.1:c.868+340_868+347dup NM_001199398.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199398.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 3 NM_001199398.3:c.868+347= NM_001199398.3:c.868+334_868+347del NM_001199398.3:c.868+335_868+347del NM_001199398.3:c.868+336_868+347del NM_001199398.3:c.868+338_868+347del NM_001199398.3:c.868+339_868+347del NM_001199398.3:c.868+343_868+347del NM_001199398.3:c.868+344_868+347del NM_001199398.3:c.868+345_868+347del NM_001199398.3:c.868+346_868+347del NM_001199398.3:c.868+347del NM_001199398.3:c.868+347dup NM_001199398.3:c.868+346_868+347dup NM_001199398.3:c.868+345_868+347dup NM_001199398.3:c.868+344_868+347dup NM_001199398.3:c.868+343_868+347dup NM_001199398.3:c.868+341_868+347dup NM_001199398.3:c.868+340_868+347dup NM_001199398.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199398.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 4 NM_001199399.1:c.868+347= NM_001199399.1:c.868+334_868+347del NM_001199399.1:c.868+335_868+347del NM_001199399.1:c.868+336_868+347del NM_001199399.1:c.868+338_868+347del NM_001199399.1:c.868+339_868+347del NM_001199399.1:c.868+343_868+347del NM_001199399.1:c.868+344_868+347del NM_001199399.1:c.868+345_868+347del NM_001199399.1:c.868+346_868+347del NM_001199399.1:c.868+347del NM_001199399.1:c.868+347dup NM_001199399.1:c.868+346_868+347dup NM_001199399.1:c.868+345_868+347dup NM_001199399.1:c.868+344_868+347dup NM_001199399.1:c.868+343_868+347dup NM_001199399.1:c.868+341_868+347dup NM_001199399.1:c.868+340_868+347dup NM_001199399.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199399.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 4 NM_001199399.3:c.868+347= NM_001199399.3:c.868+334_868+347del NM_001199399.3:c.868+335_868+347del NM_001199399.3:c.868+336_868+347del NM_001199399.3:c.868+338_868+347del NM_001199399.3:c.868+339_868+347del NM_001199399.3:c.868+343_868+347del NM_001199399.3:c.868+344_868+347del NM_001199399.3:c.868+345_868+347del NM_001199399.3:c.868+346_868+347del NM_001199399.3:c.868+347del NM_001199399.3:c.868+347dup NM_001199399.3:c.868+346_868+347dup NM_001199399.3:c.868+345_868+347dup NM_001199399.3:c.868+344_868+347dup NM_001199399.3:c.868+343_868+347dup NM_001199399.3:c.868+341_868+347dup NM_001199399.3:c.868+340_868+347dup NM_001199399.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199399.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 5 NM_001199400.1:c.868+347= NM_001199400.1:c.868+334_868+347del NM_001199400.1:c.868+335_868+347del NM_001199400.1:c.868+336_868+347del NM_001199400.1:c.868+338_868+347del NM_001199400.1:c.868+339_868+347del NM_001199400.1:c.868+343_868+347del NM_001199400.1:c.868+344_868+347del NM_001199400.1:c.868+345_868+347del NM_001199400.1:c.868+346_868+347del NM_001199400.1:c.868+347del NM_001199400.1:c.868+347dup NM_001199400.1:c.868+346_868+347dup NM_001199400.1:c.868+345_868+347dup NM_001199400.1:c.868+344_868+347dup NM_001199400.1:c.868+343_868+347dup NM_001199400.1:c.868+341_868+347dup NM_001199400.1:c.868+340_868+347dup NM_001199400.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199400.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 5 NM_001199400.3:c.868+347= NM_001199400.3:c.868+334_868+347del NM_001199400.3:c.868+335_868+347del NM_001199400.3:c.868+336_868+347del NM_001199400.3:c.868+338_868+347del NM_001199400.3:c.868+339_868+347del NM_001199400.3:c.868+343_868+347del NM_001199400.3:c.868+344_868+347del NM_001199400.3:c.868+345_868+347del NM_001199400.3:c.868+346_868+347del NM_001199400.3:c.868+347del NM_001199400.3:c.868+347dup NM_001199400.3:c.868+346_868+347dup NM_001199400.3:c.868+345_868+347dup NM_001199400.3:c.868+344_868+347dup NM_001199400.3:c.868+343_868+347dup NM_001199400.3:c.868+341_868+347dup NM_001199400.3:c.868+340_868+347dup NM_001199400.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001199400.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 6 NM_001374418.1:c.868+347= NM_001374418.1:c.868+334_868+347del NM_001374418.1:c.868+335_868+347del NM_001374418.1:c.868+336_868+347del NM_001374418.1:c.868+338_868+347del NM_001374418.1:c.868+339_868+347del NM_001374418.1:c.868+343_868+347del NM_001374418.1:c.868+344_868+347del NM_001374418.1:c.868+345_868+347del NM_001374418.1:c.868+346_868+347del NM_001374418.1:c.868+347del NM_001374418.1:c.868+347dup NM_001374418.1:c.868+346_868+347dup NM_001374418.1:c.868+345_868+347dup NM_001374418.1:c.868+344_868+347dup NM_001374418.1:c.868+343_868+347dup NM_001374418.1:c.868+341_868+347dup NM_001374418.1:c.868+340_868+347dup NM_001374418.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374418.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 7 NM_001374419.1:c.868+347= NM_001374419.1:c.868+334_868+347del NM_001374419.1:c.868+335_868+347del NM_001374419.1:c.868+336_868+347del NM_001374419.1:c.868+338_868+347del NM_001374419.1:c.868+339_868+347del NM_001374419.1:c.868+343_868+347del NM_001374419.1:c.868+344_868+347del NM_001374419.1:c.868+345_868+347del NM_001374419.1:c.868+346_868+347del NM_001374419.1:c.868+347del NM_001374419.1:c.868+347dup NM_001374419.1:c.868+346_868+347dup NM_001374419.1:c.868+345_868+347dup NM_001374419.1:c.868+344_868+347dup NM_001374419.1:c.868+343_868+347dup NM_001374419.1:c.868+341_868+347dup NM_001374419.1:c.868+340_868+347dup NM_001374419.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374419.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 8 NM_001374420.1:c.868+347= NM_001374420.1:c.868+334_868+347del NM_001374420.1:c.868+335_868+347del NM_001374420.1:c.868+336_868+347del NM_001374420.1:c.868+338_868+347del NM_001374420.1:c.868+339_868+347del NM_001374420.1:c.868+343_868+347del NM_001374420.1:c.868+344_868+347del NM_001374420.1:c.868+345_868+347del NM_001374420.1:c.868+346_868+347del NM_001374420.1:c.868+347del NM_001374420.1:c.868+347dup NM_001374420.1:c.868+346_868+347dup NM_001374420.1:c.868+345_868+347dup NM_001374420.1:c.868+344_868+347dup NM_001374420.1:c.868+343_868+347dup NM_001374420.1:c.868+341_868+347dup NM_001374420.1:c.868+340_868+347dup NM_001374420.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374420.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 9 NM_001374421.1:c.868+347= NM_001374421.1:c.868+334_868+347del NM_001374421.1:c.868+335_868+347del NM_001374421.1:c.868+336_868+347del NM_001374421.1:c.868+338_868+347del NM_001374421.1:c.868+339_868+347del NM_001374421.1:c.868+343_868+347del NM_001374421.1:c.868+344_868+347del NM_001374421.1:c.868+345_868+347del NM_001374421.1:c.868+346_868+347del NM_001374421.1:c.868+347del NM_001374421.1:c.868+347dup NM_001374421.1:c.868+346_868+347dup NM_001374421.1:c.868+345_868+347dup NM_001374421.1:c.868+344_868+347dup NM_001374421.1:c.868+343_868+347dup NM_001374421.1:c.868+341_868+347dup NM_001374421.1:c.868+340_868+347dup NM_001374421.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374421.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 10 NM_001374422.1:c.868+347= NM_001374422.1:c.868+334_868+347del NM_001374422.1:c.868+335_868+347del NM_001374422.1:c.868+336_868+347del NM_001374422.1:c.868+338_868+347del NM_001374422.1:c.868+339_868+347del NM_001374422.1:c.868+343_868+347del NM_001374422.1:c.868+344_868+347del NM_001374422.1:c.868+345_868+347del NM_001374422.1:c.868+346_868+347del NM_001374422.1:c.868+347del NM_001374422.1:c.868+347dup NM_001374422.1:c.868+346_868+347dup NM_001374422.1:c.868+345_868+347dup NM_001374422.1:c.868+344_868+347dup NM_001374422.1:c.868+343_868+347dup NM_001374422.1:c.868+341_868+347dup NM_001374422.1:c.868+340_868+347dup NM_001374422.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374422.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 11 NM_001374423.1:c.868+347= NM_001374423.1:c.868+334_868+347del NM_001374423.1:c.868+335_868+347del NM_001374423.1:c.868+336_868+347del NM_001374423.1:c.868+338_868+347del NM_001374423.1:c.868+339_868+347del NM_001374423.1:c.868+343_868+347del NM_001374423.1:c.868+344_868+347del NM_001374423.1:c.868+345_868+347del NM_001374423.1:c.868+346_868+347del NM_001374423.1:c.868+347del NM_001374423.1:c.868+347dup NM_001374423.1:c.868+346_868+347dup NM_001374423.1:c.868+345_868+347dup NM_001374423.1:c.868+344_868+347dup NM_001374423.1:c.868+343_868+347dup NM_001374423.1:c.868+341_868+347dup NM_001374423.1:c.868+340_868+347dup NM_001374423.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_001374423.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 2 NM_012224.2:c.868+347= NM_012224.2:c.868+334_868+347del NM_012224.2:c.868+335_868+347del NM_012224.2:c.868+336_868+347del NM_012224.2:c.868+338_868+347del NM_012224.2:c.868+339_868+347del NM_012224.2:c.868+343_868+347del NM_012224.2:c.868+344_868+347del NM_012224.2:c.868+345_868+347del NM_012224.2:c.868+346_868+347del NM_012224.2:c.868+347del NM_012224.2:c.868+347dup NM_012224.2:c.868+346_868+347dup NM_012224.2:c.868+345_868+347dup NM_012224.2:c.868+344_868+347dup NM_012224.2:c.868+343_868+347dup NM_012224.2:c.868+341_868+347dup NM_012224.2:c.868+340_868+347dup NM_012224.2:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_012224.2:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant 2 NM_012224.4:c.868+347= NM_012224.4:c.868+334_868+347del NM_012224.4:c.868+335_868+347del NM_012224.4:c.868+336_868+347del NM_012224.4:c.868+338_868+347del NM_012224.4:c.868+339_868+347del NM_012224.4:c.868+343_868+347del NM_012224.4:c.868+344_868+347del NM_012224.4:c.868+345_868+347del NM_012224.4:c.868+346_868+347del NM_012224.4:c.868+347del NM_012224.4:c.868+347dup NM_012224.4:c.868+346_868+347dup NM_012224.4:c.868+345_868+347dup NM_012224.4:c.868+344_868+347dup NM_012224.4:c.868+343_868+347dup NM_012224.4:c.868+341_868+347dup NM_012224.4:c.868+340_868+347dup NM_012224.4:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT NM_012224.4:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X1 XM_005263027.1:c.868+347= XM_005263027.1:c.868+334_868+347del XM_005263027.1:c.868+335_868+347del XM_005263027.1:c.868+336_868+347del XM_005263027.1:c.868+338_868+347del XM_005263027.1:c.868+339_868+347del XM_005263027.1:c.868+343_868+347del XM_005263027.1:c.868+344_868+347del XM_005263027.1:c.868+345_868+347del XM_005263027.1:c.868+346_868+347del XM_005263027.1:c.868+347del XM_005263027.1:c.868+347dup XM_005263027.1:c.868+346_868+347dup XM_005263027.1:c.868+345_868+347dup XM_005263027.1:c.868+344_868+347dup XM_005263027.1:c.868+343_868+347dup XM_005263027.1:c.868+341_868+347dup XM_005263027.1:c.868+340_868+347dup XM_005263027.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_005263027.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X2 XM_005263028.1:c.868+347= XM_005263028.1:c.868+334_868+347del XM_005263028.1:c.868+335_868+347del XM_005263028.1:c.868+336_868+347del XM_005263028.1:c.868+338_868+347del XM_005263028.1:c.868+339_868+347del XM_005263028.1:c.868+343_868+347del XM_005263028.1:c.868+344_868+347del XM_005263028.1:c.868+345_868+347del XM_005263028.1:c.868+346_868+347del XM_005263028.1:c.868+347del XM_005263028.1:c.868+347dup XM_005263028.1:c.868+346_868+347dup XM_005263028.1:c.868+345_868+347dup XM_005263028.1:c.868+344_868+347dup XM_005263028.1:c.868+343_868+347dup XM_005263028.1:c.868+341_868+347dup XM_005263028.1:c.868+340_868+347dup XM_005263028.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_005263028.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X3 XM_011532004.2:c.868+347= XM_011532004.2:c.868+334_868+347del XM_011532004.2:c.868+335_868+347del XM_011532004.2:c.868+336_868+347del XM_011532004.2:c.868+338_868+347del XM_011532004.2:c.868+339_868+347del XM_011532004.2:c.868+343_868+347del XM_011532004.2:c.868+344_868+347del XM_011532004.2:c.868+345_868+347del XM_011532004.2:c.868+346_868+347del XM_011532004.2:c.868+347del XM_011532004.2:c.868+347dup XM_011532004.2:c.868+346_868+347dup XM_011532004.2:c.868+345_868+347dup XM_011532004.2:c.868+344_868+347dup XM_011532004.2:c.868+343_868+347dup XM_011532004.2:c.868+341_868+347dup XM_011532004.2:c.868+340_868+347dup XM_011532004.2:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_011532004.2:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X12 XM_011532005.3:c.868+347= XM_011532005.3:c.868+334_868+347del XM_011532005.3:c.868+335_868+347del XM_011532005.3:c.868+336_868+347del XM_011532005.3:c.868+338_868+347del XM_011532005.3:c.868+339_868+347del XM_011532005.3:c.868+343_868+347del XM_011532005.3:c.868+344_868+347del XM_011532005.3:c.868+345_868+347del XM_011532005.3:c.868+346_868+347del XM_011532005.3:c.868+347del XM_011532005.3:c.868+347dup XM_011532005.3:c.868+346_868+347dup XM_011532005.3:c.868+345_868+347dup XM_011532005.3:c.868+344_868+347dup XM_011532005.3:c.868+343_868+347dup XM_011532005.3:c.868+341_868+347dup XM_011532005.3:c.868+340_868+347dup XM_011532005.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_011532005.3:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X1 XM_047415731.1:c.868+347= XM_047415731.1:c.868+334_868+347del XM_047415731.1:c.868+335_868+347del XM_047415731.1:c.868+336_868+347del XM_047415731.1:c.868+338_868+347del XM_047415731.1:c.868+339_868+347del XM_047415731.1:c.868+343_868+347del XM_047415731.1:c.868+344_868+347del XM_047415731.1:c.868+345_868+347del XM_047415731.1:c.868+346_868+347del XM_047415731.1:c.868+347del XM_047415731.1:c.868+347dup XM_047415731.1:c.868+346_868+347dup XM_047415731.1:c.868+345_868+347dup XM_047415731.1:c.868+344_868+347dup XM_047415731.1:c.868+343_868+347dup XM_047415731.1:c.868+341_868+347dup XM_047415731.1:c.868+340_868+347dup XM_047415731.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415731.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X2 XM_047415732.1:c.868+347= XM_047415732.1:c.868+334_868+347del XM_047415732.1:c.868+335_868+347del XM_047415732.1:c.868+336_868+347del XM_047415732.1:c.868+338_868+347del XM_047415732.1:c.868+339_868+347del XM_047415732.1:c.868+343_868+347del XM_047415732.1:c.868+344_868+347del XM_047415732.1:c.868+345_868+347del XM_047415732.1:c.868+346_868+347del XM_047415732.1:c.868+347del XM_047415732.1:c.868+347dup XM_047415732.1:c.868+346_868+347dup XM_047415732.1:c.868+345_868+347dup XM_047415732.1:c.868+344_868+347dup XM_047415732.1:c.868+343_868+347dup XM_047415732.1:c.868+341_868+347dup XM_047415732.1:c.868+340_868+347dup XM_047415732.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415732.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X4 XM_047415733.1:c.868+347= XM_047415733.1:c.868+334_868+347del XM_047415733.1:c.868+335_868+347del XM_047415733.1:c.868+336_868+347del XM_047415733.1:c.868+338_868+347del XM_047415733.1:c.868+339_868+347del XM_047415733.1:c.868+343_868+347del XM_047415733.1:c.868+344_868+347del XM_047415733.1:c.868+345_868+347del XM_047415733.1:c.868+346_868+347del XM_047415733.1:c.868+347del XM_047415733.1:c.868+347dup XM_047415733.1:c.868+346_868+347dup XM_047415733.1:c.868+345_868+347dup XM_047415733.1:c.868+344_868+347dup XM_047415733.1:c.868+343_868+347dup XM_047415733.1:c.868+341_868+347dup XM_047415733.1:c.868+340_868+347dup XM_047415733.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415733.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X5 XM_047415734.1:c.868+347= XM_047415734.1:c.868+334_868+347del XM_047415734.1:c.868+335_868+347del XM_047415734.1:c.868+336_868+347del XM_047415734.1:c.868+338_868+347del XM_047415734.1:c.868+339_868+347del XM_047415734.1:c.868+343_868+347del XM_047415734.1:c.868+344_868+347del XM_047415734.1:c.868+345_868+347del XM_047415734.1:c.868+346_868+347del XM_047415734.1:c.868+347del XM_047415734.1:c.868+347dup XM_047415734.1:c.868+346_868+347dup XM_047415734.1:c.868+345_868+347dup XM_047415734.1:c.868+344_868+347dup XM_047415734.1:c.868+343_868+347dup XM_047415734.1:c.868+341_868+347dup XM_047415734.1:c.868+340_868+347dup XM_047415734.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415734.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X6 XM_047415735.1:c.868+347= XM_047415735.1:c.868+334_868+347del XM_047415735.1:c.868+335_868+347del XM_047415735.1:c.868+336_868+347del XM_047415735.1:c.868+338_868+347del XM_047415735.1:c.868+339_868+347del XM_047415735.1:c.868+343_868+347del XM_047415735.1:c.868+344_868+347del XM_047415735.1:c.868+345_868+347del XM_047415735.1:c.868+346_868+347del XM_047415735.1:c.868+347del XM_047415735.1:c.868+347dup XM_047415735.1:c.868+346_868+347dup XM_047415735.1:c.868+345_868+347dup XM_047415735.1:c.868+344_868+347dup XM_047415735.1:c.868+343_868+347dup XM_047415735.1:c.868+341_868+347dup XM_047415735.1:c.868+340_868+347dup XM_047415735.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415735.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X7 XM_047415736.1:c.868+347= XM_047415736.1:c.868+334_868+347del XM_047415736.1:c.868+335_868+347del XM_047415736.1:c.868+336_868+347del XM_047415736.1:c.868+338_868+347del XM_047415736.1:c.868+339_868+347del XM_047415736.1:c.868+343_868+347del XM_047415736.1:c.868+344_868+347del XM_047415736.1:c.868+345_868+347del XM_047415736.1:c.868+346_868+347del XM_047415736.1:c.868+347del XM_047415736.1:c.868+347dup XM_047415736.1:c.868+346_868+347dup XM_047415736.1:c.868+345_868+347dup XM_047415736.1:c.868+344_868+347dup XM_047415736.1:c.868+343_868+347dup XM_047415736.1:c.868+341_868+347dup XM_047415736.1:c.868+340_868+347dup XM_047415736.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415736.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X8 XM_047415737.1:c.247+347= XM_047415737.1:c.247+334_247+347del XM_047415737.1:c.247+335_247+347del XM_047415737.1:c.247+336_247+347del XM_047415737.1:c.247+338_247+347del XM_047415737.1:c.247+339_247+347del XM_047415737.1:c.247+343_247+347del XM_047415737.1:c.247+344_247+347del XM_047415737.1:c.247+345_247+347del XM_047415737.1:c.247+346_247+347del XM_047415737.1:c.247+347del XM_047415737.1:c.247+347dup XM_047415737.1:c.247+346_247+347dup XM_047415737.1:c.247+345_247+347dup XM_047415737.1:c.247+344_247+347dup XM_047415737.1:c.247+343_247+347dup XM_047415737.1:c.247+341_247+347dup XM_047415737.1:c.247+340_247+347dup XM_047415737.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415737.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X9 XM_047415738.1:c.247+347= XM_047415738.1:c.247+334_247+347del XM_047415738.1:c.247+335_247+347del XM_047415738.1:c.247+336_247+347del XM_047415738.1:c.247+338_247+347del XM_047415738.1:c.247+339_247+347del XM_047415738.1:c.247+343_247+347del XM_047415738.1:c.247+344_247+347del XM_047415738.1:c.247+345_247+347del XM_047415738.1:c.247+346_247+347del XM_047415738.1:c.247+347del XM_047415738.1:c.247+347dup XM_047415738.1:c.247+346_247+347dup XM_047415738.1:c.247+345_247+347dup XM_047415738.1:c.247+344_247+347dup XM_047415738.1:c.247+343_247+347dup XM_047415738.1:c.247+341_247+347dup XM_047415738.1:c.247+340_247+347dup XM_047415738.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415738.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X10 XM_047415739.1:c.247+347= XM_047415739.1:c.247+334_247+347del XM_047415739.1:c.247+335_247+347del XM_047415739.1:c.247+336_247+347del XM_047415739.1:c.247+338_247+347del XM_047415739.1:c.247+339_247+347del XM_047415739.1:c.247+343_247+347del XM_047415739.1:c.247+344_247+347del XM_047415739.1:c.247+345_247+347del XM_047415739.1:c.247+346_247+347del XM_047415739.1:c.247+347del XM_047415739.1:c.247+347dup XM_047415739.1:c.247+346_247+347dup XM_047415739.1:c.247+345_247+347dup XM_047415739.1:c.247+344_247+347dup XM_047415739.1:c.247+343_247+347dup XM_047415739.1:c.247+341_247+347dup XM_047415739.1:c.247+340_247+347dup XM_047415739.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415739.1:c.247+347_247+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X11 XM_047415740.1:c.868+347= XM_047415740.1:c.868+334_868+347del XM_047415740.1:c.868+335_868+347del XM_047415740.1:c.868+336_868+347del XM_047415740.1:c.868+338_868+347del XM_047415740.1:c.868+339_868+347del XM_047415740.1:c.868+343_868+347del XM_047415740.1:c.868+344_868+347del XM_047415740.1:c.868+345_868+347del XM_047415740.1:c.868+346_868+347del XM_047415740.1:c.868+347del XM_047415740.1:c.868+347dup XM_047415740.1:c.868+346_868+347dup XM_047415740.1:c.868+345_868+347dup XM_047415740.1:c.868+344_868+347dup XM_047415740.1:c.868+343_868+347dup XM_047415740.1:c.868+341_868+347dup XM_047415740.1:c.868+340_868+347dup XM_047415740.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415740.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NEK1 transcript variant X13 XM_047415741.1:c.868+347= XM_047415741.1:c.868+334_868+347del XM_047415741.1:c.868+335_868+347del XM_047415741.1:c.868+336_868+347del XM_047415741.1:c.868+338_868+347del XM_047415741.1:c.868+339_868+347del XM_047415741.1:c.868+343_868+347del XM_047415741.1:c.868+344_868+347del XM_047415741.1:c.868+345_868+347del XM_047415741.1:c.868+346_868+347del XM_047415741.1:c.868+347del XM_047415741.1:c.868+347dup XM_047415741.1:c.868+346_868+347dup XM_047415741.1:c.868+345_868+347dup XM_047415741.1:c.868+344_868+347dup XM_047415741.1:c.868+343_868+347dup XM_047415741.1:c.868+341_868+347dup XM_047415741.1:c.868+340_868+347dup XM_047415741.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTT XM_047415741.1:c.868+347_868+348insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

51 SubSNP, 26 Frequency submissions
No Submitter Submission ID Date (Build)
1 HGSV ss79718092 Dec 15, 2007 (129)
2 HGSV ss80302366 Dec 15, 2007 (129)
3 HUMANGENOME_JCVI ss95377828 Feb 06, 2009 (130)
4 PJP ss295200491 May 09, 2011 (137)
5 PJP ss295200492 May 09, 2011 (134)
6 1000GENOMES ss1373117007 Aug 21, 2014 (142)
7 EVA_GENOME_DK ss1576397990 Apr 01, 2015 (144)
8 SWEGEN ss2996009541 Nov 08, 2017 (151)
9 EVA_DECODE ss3713609961 Jul 13, 2019 (153)
10 EVA_DECODE ss3713609962 Jul 13, 2019 (153)
11 EVA_DECODE ss3713609963 Jul 13, 2019 (153)
12 ACPOP ss3731855148 Jul 13, 2019 (153)
13 ACPOP ss3731855149 Jul 13, 2019 (153)
14 PACBIO ss3784942393 Jul 13, 2019 (153)
15 PACBIO ss3790367249 Jul 13, 2019 (153)
16 PACBIO ss3790367250 Jul 13, 2019 (153)
17 PACBIO ss3795242936 Jul 13, 2019 (153)
18 KHV_HUMAN_GENOMES ss3805916867 Jul 13, 2019 (153)
19 EVA ss3828954303 Apr 26, 2020 (154)
20 GNOMAD ss4125291818 Apr 26, 2021 (155)
21 GNOMAD ss4125291819 Apr 26, 2021 (155)
22 GNOMAD ss4125291820 Apr 26, 2021 (155)
23 GNOMAD ss4125291821 Apr 26, 2021 (155)
24 GNOMAD ss4125291822 Apr 26, 2021 (155)
25 GNOMAD ss4125291823 Apr 26, 2021 (155)
26 GNOMAD ss4125291824 Apr 26, 2021 (155)
27 GNOMAD ss4125291825 Apr 26, 2021 (155)
28 GNOMAD ss4125291826 Apr 26, 2021 (155)
29 GNOMAD ss4125291827 Apr 26, 2021 (155)
30 GNOMAD ss4125291828 Apr 26, 2021 (155)
31 GNOMAD ss4125291829 Apr 26, 2021 (155)
32 GNOMAD ss4125291830 Apr 26, 2021 (155)
33 GNOMAD ss4125291831 Apr 26, 2021 (155)
34 GNOMAD ss4125291832 Apr 26, 2021 (155)
35 TOMMO_GENOMICS ss5169269337 Apr 26, 2021 (155)
36 TOMMO_GENOMICS ss5169269338 Apr 26, 2021 (155)
37 TOMMO_GENOMICS ss5169269339 Apr 26, 2021 (155)
38 1000G_HIGH_COVERAGE ss5262004223 Oct 17, 2022 (156)
39 1000G_HIGH_COVERAGE ss5262004224 Oct 17, 2022 (156)
40 1000G_HIGH_COVERAGE ss5262004225 Oct 17, 2022 (156)
41 1000G_HIGH_COVERAGE ss5262004226 Oct 17, 2022 (156)
42 HUGCELL_USP ss5460453393 Oct 17, 2022 (156)
43 HUGCELL_USP ss5460453394 Oct 17, 2022 (156)
44 HUGCELL_USP ss5460453395 Oct 17, 2022 (156)
45 HUGCELL_USP ss5460453396 Oct 17, 2022 (156)
46 TOMMO_GENOMICS ss5704609502 Oct 17, 2022 (156)
47 TOMMO_GENOMICS ss5704609503 Oct 17, 2022 (156)
48 TOMMO_GENOMICS ss5704609504 Oct 17, 2022 (156)
49 EVA ss5845102069 Oct 17, 2022 (156)
50 EVA ss5845102070 Oct 17, 2022 (156)
51 EVA ss5845102071 Oct 17, 2022 (156)
52 1000Genomes NC_000004.11 - 170501646 Oct 12, 2018 (152)
53 The Danish reference pan genome NC_000004.11 - 170501646 Apr 26, 2020 (154)
54 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
55 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
56 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
57 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
58 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
59 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
60 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
61 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
62 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
63 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
64 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
65 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
66 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
67 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
68 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 173135226 (NC_000004.12:169580494::A 645/59830)
Row 173135227 (NC_000004.12:169580494::AA 67/59954)
Row 173135228 (NC_000004.12:169580494::AAA 17/59956)...

- Apr 26, 2021 (155)
69 Northern Sweden

Submission ignored due to conflicting rows:
Row 5140013 (NC_000004.11:170501645:A: 241/540)
Row 5140014 (NC_000004.11:170501645:AA: 30/540)

- Jul 13, 2019 (153)
70 Northern Sweden

Submission ignored due to conflicting rows:
Row 5140013 (NC_000004.11:170501645:A: 241/540)
Row 5140014 (NC_000004.11:170501645:AA: 30/540)

- Jul 13, 2019 (153)
71 8.3KJPN

Submission ignored due to conflicting rows:
Row 27238644 (NC_000004.11:170501645:A: 12019/16632)
Row 27238645 (NC_000004.11:170501645:AA: 359/16632)
Row 27238646 (NC_000004.11:170501645:AAA: 6/16632)

- Apr 26, 2021 (155)
72 8.3KJPN

Submission ignored due to conflicting rows:
Row 27238644 (NC_000004.11:170501645:A: 12019/16632)
Row 27238645 (NC_000004.11:170501645:AA: 359/16632)
Row 27238646 (NC_000004.11:170501645:AAA: 6/16632)

- Apr 26, 2021 (155)
73 8.3KJPN

Submission ignored due to conflicting rows:
Row 27238644 (NC_000004.11:170501645:A: 12019/16632)
Row 27238645 (NC_000004.11:170501645:AA: 359/16632)
Row 27238646 (NC_000004.11:170501645:AAA: 6/16632)

- Apr 26, 2021 (155)
74 14KJPN

Submission ignored due to conflicting rows:
Row 38446606 (NC_000004.12:169580494:A: 23608/28136)
Row 38446607 (NC_000004.12:169580494:AA: 689/28136)
Row 38446608 (NC_000004.12:169580494:AAA: 12/28136)

- Oct 17, 2022 (156)
75 14KJPN

Submission ignored due to conflicting rows:
Row 38446606 (NC_000004.12:169580494:A: 23608/28136)
Row 38446607 (NC_000004.12:169580494:AA: 689/28136)
Row 38446608 (NC_000004.12:169580494:AAA: 12/28136)

- Oct 17, 2022 (156)
76 14KJPN

Submission ignored due to conflicting rows:
Row 38446606 (NC_000004.12:169580494:A: 23608/28136)
Row 38446607 (NC_000004.12:169580494:AA: 689/28136)
Row 38446608 (NC_000004.12:169580494:AAA: 12/28136)

- Oct 17, 2022 (156)
77 ALFA NC_000004.12 - 169580495 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs34311752 May 11, 2012 (137)
rs35411785 May 23, 2006 (127)
rs143394456 May 11, 2012 (137)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4125291832 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAA:

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA

(self)
ss4125291831 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAA:

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA

(self)
ss4125291830 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAA:

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA

(self)
ss4125291829 NC_000004.12:169580494:AAAAAAAAAA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA

(self)
ss4125291828, ss5262004226 NC_000004.12:169580494:AAAA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA

(self)
ss5169269339, ss5845102071 NC_000004.11:170501645:AAA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA

(self)
ss3713609963, ss4125291827, ss5704609504 NC_000004.12:169580494:AAA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA

(self)
ss79718092 NC_000004.9:170876395:AA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

(self)
ss2996009541, ss3731855149, ss3784942393, ss3790367249, ss5169269338, ss5845102069 NC_000004.11:170501645:AA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

(self)
ss5262004224, ss5460453393, ss5704609503 NC_000004.12:169580494:AA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

(self)
ss3713609962 NC_000004.12:169580495:AA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA

(self)
ss80302366 NC_000004.9:170876396:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss295200491 NC_000004.10:170738220:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss295200492 NC_000004.10:170738241:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
24450433, 961875, ss1373117007, ss1576397990, ss3731855148, ss3790367250, ss3795242936, ss3828954303, ss5169269337, ss5845102070 NC_000004.11:170501645:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss3805916867, ss5460453394, ss5704609502 NC_000004.12:169580494:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss3713609961 NC_000004.12:169580496:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss95377828 NT_016354.19:95049387:A: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291818, ss5262004225, ss5460453396 NC_000004.12:169580494::A NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291819, ss5262004223, ss5460453395 NC_000004.12:169580494::AA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291820 NC_000004.12:169580494::AAA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291821 NC_000004.12:169580494::AAAA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291822 NC_000004.12:169580494::AAAAA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
488166804 NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291823 NC_000004.12:169580494::AAAAAAA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291824 NC_000004.12:169580494::AAAAAAAA NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291825 NC_000004.12:169580494::AAAAAAAAAA…

NC_000004.12:169580494::AAAAAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
ss4125291826 NC_000004.12:169580494::AAAAAAAAAA…

NC_000004.12:169580494::AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

(self)
Removed from this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Destination RSIDs
ss3450099120 NC_000004.12:169580494:AAAAA: NC_000004.12:169580494:AAAAAAAAAAA…

NC_000004.12:169580494:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA

Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11348370

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d