Name: rs11341536
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11341536

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:44722466-44722485 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₁₀ / del(T)₅ / del(T)₄ / del…
del(T)₁₀ / del(T)₅ / del(T)₄ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅ / dup(T)₇
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₁₀=0.000 (0/504, ALFA)
del(T)₅=0.000 (0/504, ALFA)
delTTT=0.000 (0/504, ALFA) (+ 5 more)
delTT=0.000 (0/504, ALFA)
delT=0.000 (0/504, ALFA)
dupT=0.000 (0/504, ALFA)
dupTT=0.000 (0/504, ALFA)
dupTTT=0.000 (0/504, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CCN5 : Intron Variant
KCNK15-AS1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	504	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
European	Sub	78	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African	Sub	326	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
African Others	Sub	18	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	308	TTTTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
Asian	Sub	12	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	10	TTTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Other Asian	Sub	2	TTTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 1	Sub	8	TTTTTTTTTTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTTTTTT=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	58	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	0	TTTTTTTTTTTTTTTTTTTT=0	TTTTTTTTTT=0, TTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTTTTTT=0	0	0	0	N/A
Other	Sub	22	TTTTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	504	(T)₂₀=1.000	del(T)₁₀=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	African	Sub	326	(T)₂₀=1.000	del(T)₁₀=0.000, del(T)₅=0.000, delTTT=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	European	Sub	78	(T)₂₀=1.00	del(T)₁₀=0.00, del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 2	Sub	58	(T)₂₀=1.00	del(T)₁₀=0.00, del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Other	Sub	22	(T)₂₀=1.00	del(T)₁₀=0.00, del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Asian	Sub	12	(T)₂₀=1.00	del(T)₁₀=0.00, del(T)₅=0.00, delTTT=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	8	(T)₂₀=1.0	del(T)₁₀=0.0, del(T)₅=0.0, delTTT=0.0, delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0
Allele Frequency Aggregator	South Asian	Sub	0	(T)₂₀=0	del(T)₁₀=0, del(T)₅=0, delTTT=0, delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.44722476_44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722481_44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722482_44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722483_44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722484_44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722485del
GRCh38.p14 chr 20	NC_000020.11:g.44722485dup
GRCh38.p14 chr 20	NC_000020.11:g.44722484_44722485dup
GRCh38.p14 chr 20	NC_000020.11:g.44722483_44722485dup
GRCh38.p14 chr 20	NC_000020.11:g.44722482_44722485dup
GRCh38.p14 chr 20	NC_000020.11:g.44722481_44722485dup
GRCh38.p14 chr 20	NC_000020.11:g.44722479_44722485dup
GRCh37.p13 chr 20	NC_000020.10:g.43351117_43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351122_43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351123_43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351124_43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351125_43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351126del
GRCh37.p13 chr 20	NC_000020.10:g.43351126dup
GRCh37.p13 chr 20	NC_000020.10:g.43351125_43351126dup
GRCh37.p13 chr 20	NC_000020.10:g.43351124_43351126dup
GRCh37.p13 chr 20	NC_000020.10:g.43351123_43351126dup
GRCh37.p13 chr 20	NC_000020.10:g.43351122_43351126dup
GRCh37.p13 chr 20	NC_000020.10:g.43351120_43351126dup

Gene: CCN5, cellular communication network factor 5 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CCN5 transcript variant 2	NM_001323369.2:c.285+2355… NM_001323369.2:c.285+2355_285+2364del	N/A	Intron Variant
CCN5 transcript variant 1	NM_001323370.2:c.278-2262… NM_001323370.2:c.278-2262_278-2253del	N/A	Intron Variant
CCN5 transcript variant 3	NM_003881.4:c.278-2262_27… NM_003881.4:c.278-2262_278-2253del	N/A	Intron Variant
CCN5 transcript variant X1	XM_047440578.1:c.278-2262… XM_047440578.1:c.278-2262_278-2253del	N/A	Intron Variant
CCN5 transcript variant X2	XM_047440579.1:c.278-2262… XM_047440579.1:c.278-2262_278-2253del	N/A	Intron Variant

Gene: KCNK15-AS1, KCNK15 and WISP2 antisense RNA 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
KCNK15-AS1 transcript	NR_132377.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₂₀=	del(T)₁₀	del(T)₅	del(T)₄	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅	dup(T)₇
GRCh38.p14 chr 20	NC_000020.11:g.44722466_44722485=	NC_000020.11:g.44722476_44722485del	NC_000020.11:g.44722481_44722485del	NC_000020.11:g.44722482_44722485del	NC_000020.11:g.44722483_44722485del	NC_000020.11:g.44722484_44722485del	NC_000020.11:g.44722485del	NC_000020.11:g.44722485dup	NC_000020.11:g.44722484_44722485dup	NC_000020.11:g.44722483_44722485dup	NC_000020.11:g.44722482_44722485dup	NC_000020.11:g.44722481_44722485dup	NC_000020.11:g.44722479_44722485dup
GRCh37.p13 chr 20	NC_000020.10:g.43351107_43351126=	NC_000020.10:g.43351117_43351126del	NC_000020.10:g.43351122_43351126del	NC_000020.10:g.43351123_43351126del	NC_000020.10:g.43351124_43351126del	NC_000020.10:g.43351125_43351126del	NC_000020.10:g.43351126del	NC_000020.10:g.43351126dup	NC_000020.10:g.43351125_43351126dup	NC_000020.10:g.43351124_43351126dup	NC_000020.10:g.43351123_43351126dup	NC_000020.10:g.43351122_43351126dup	NC_000020.10:g.43351120_43351126dup
CCN5 transcript variant 2	NM_001323369.2:c.285+2345=	NM_001323369.2:c.285+2355_285+2364del	NM_001323369.2:c.285+2360_285+2364del	NM_001323369.2:c.285+2361_285+2364del	NM_001323369.2:c.285+2362_285+2364del	NM_001323369.2:c.285+2363_285+2364del	NM_001323369.2:c.285+2364del	NM_001323369.2:c.285+2364dup	NM_001323369.2:c.285+2363_285+2364dup	NM_001323369.2:c.285+2362_285+2364dup	NM_001323369.2:c.285+2361_285+2364dup	NM_001323369.2:c.285+2360_285+2364dup	NM_001323369.2:c.285+2358_285+2364dup
CCN5 transcript variant 1	NM_001323370.2:c.278-2272=	NM_001323370.2:c.278-2262_278-2253del	NM_001323370.2:c.278-2257_278-2253del	NM_001323370.2:c.278-2256_278-2253del	NM_001323370.2:c.278-2255_278-2253del	NM_001323370.2:c.278-2254_278-2253del	NM_001323370.2:c.278-2253del	NM_001323370.2:c.278-2253dup	NM_001323370.2:c.278-2254_278-2253dup	NM_001323370.2:c.278-2255_278-2253dup	NM_001323370.2:c.278-2256_278-2253dup	NM_001323370.2:c.278-2257_278-2253dup	NM_001323370.2:c.278-2259_278-2253dup
WISP2 transcript	NM_003881.2:c.278-2272=	NM_003881.2:c.278-2262_278-2253del	NM_003881.2:c.278-2257_278-2253del	NM_003881.2:c.278-2256_278-2253del	NM_003881.2:c.278-2255_278-2253del	NM_003881.2:c.278-2254_278-2253del	NM_003881.2:c.278-2253del	NM_003881.2:c.278-2253dup	NM_003881.2:c.278-2254_278-2253dup	NM_003881.2:c.278-2255_278-2253dup	NM_003881.2:c.278-2256_278-2253dup	NM_003881.2:c.278-2257_278-2253dup	NM_003881.2:c.278-2259_278-2253dup
CCN5 transcript variant 3	NM_003881.4:c.278-2272=	NM_003881.4:c.278-2262_278-2253del	NM_003881.4:c.278-2257_278-2253del	NM_003881.4:c.278-2256_278-2253del	NM_003881.4:c.278-2255_278-2253del	NM_003881.4:c.278-2254_278-2253del	NM_003881.4:c.278-2253del	NM_003881.4:c.278-2253dup	NM_003881.4:c.278-2254_278-2253dup	NM_003881.4:c.278-2255_278-2253dup	NM_003881.4:c.278-2256_278-2253dup	NM_003881.4:c.278-2257_278-2253dup	NM_003881.4:c.278-2259_278-2253dup
WISP2 transcript variant X1	XM_005260603.1:c.278-2272=	XM_005260603.1:c.278-2262_278-2253del	XM_005260603.1:c.278-2257_278-2253del	XM_005260603.1:c.278-2256_278-2253del	XM_005260603.1:c.278-2255_278-2253del	XM_005260603.1:c.278-2254_278-2253del	XM_005260603.1:c.278-2253del	XM_005260603.1:c.278-2253dup	XM_005260603.1:c.278-2254_278-2253dup	XM_005260603.1:c.278-2255_278-2253dup	XM_005260603.1:c.278-2256_278-2253dup	XM_005260603.1:c.278-2257_278-2253dup	XM_005260603.1:c.278-2259_278-2253dup
WISP2 transcript variant X2	XM_005260604.1:c.285+2345=	XM_005260604.1:c.285+2355_285+2364del	XM_005260604.1:c.285+2360_285+2364del	XM_005260604.1:c.285+2361_285+2364del	XM_005260604.1:c.285+2362_285+2364del	XM_005260604.1:c.285+2363_285+2364del	XM_005260604.1:c.285+2364del	XM_005260604.1:c.285+2364dup	XM_005260604.1:c.285+2363_285+2364dup	XM_005260604.1:c.285+2362_285+2364dup	XM_005260604.1:c.285+2361_285+2364dup	XM_005260604.1:c.285+2360_285+2364dup	XM_005260604.1:c.285+2358_285+2364dup
CCN5 transcript variant X1	XM_047440578.1:c.278-2272=	XM_047440578.1:c.278-2262_278-2253del	XM_047440578.1:c.278-2257_278-2253del	XM_047440578.1:c.278-2256_278-2253del	XM_047440578.1:c.278-2255_278-2253del	XM_047440578.1:c.278-2254_278-2253del	XM_047440578.1:c.278-2253del	XM_047440578.1:c.278-2253dup	XM_047440578.1:c.278-2254_278-2253dup	XM_047440578.1:c.278-2255_278-2253dup	XM_047440578.1:c.278-2256_278-2253dup	XM_047440578.1:c.278-2257_278-2253dup	XM_047440578.1:c.278-2259_278-2253dup
CCN5 transcript variant X2	XM_047440579.1:c.278-2272=	XM_047440579.1:c.278-2262_278-2253del	XM_047440579.1:c.278-2257_278-2253del	XM_047440579.1:c.278-2256_278-2253del	XM_047440579.1:c.278-2255_278-2253del	XM_047440579.1:c.278-2254_278-2253del	XM_047440579.1:c.278-2253del	XM_047440579.1:c.278-2253dup	XM_047440579.1:c.278-2254_278-2253dup	XM_047440579.1:c.278-2255_278-2253dup	XM_047440579.1:c.278-2256_278-2253dup	XM_047440579.1:c.278-2257_278-2253dup	XM_047440579.1:c.278-2259_278-2253dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

43 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss41383677	Dec 03, 2013 (138)
2	ABI	ss41398634	Dec 03, 2013 (138)
3	HUMANGENOME_JCVI	ss95740878	Feb 13, 2009 (137)
4	HUMANGENOME_JCVI	ss96247796	Feb 04, 2009 (130)
5	PJP	ss295049769	May 09, 2011 (137)
6	PJP	ss295049770	May 09, 2011 (137)
7	SSMP	ss664477342	Apr 01, 2015 (144)
8	SWEGEN	ss3018238778	Jan 10, 2018 (151)
9	EVA_DECODE	ss3707015460	Jul 13, 2019 (153)
10	EVA_DECODE	ss3707015463	Jul 13, 2019 (153)
11	EVA_DECODE	ss3707015464	Jul 13, 2019 (153)
12	PACBIO	ss3793546169	Jul 13, 2019 (153)
13	PACBIO	ss3793546170	Jul 13, 2019 (153)
14	PACBIO	ss3798433115	Jul 13, 2019 (153)
15	PACBIO	ss3798433116	Jul 13, 2019 (153)
16	EVA	ss3835688895	Apr 27, 2020 (154)
17	GNOMAD	ss4354023968	Apr 27, 2021 (155)
18	GNOMAD	ss4354023969	Apr 27, 2021 (155)
19	GNOMAD	ss4354023970	Apr 27, 2021 (155)
20	GNOMAD	ss4354023971	Apr 27, 2021 (155)
21	GNOMAD	ss4354023972	Apr 27, 2021 (155)
22	GNOMAD	ss4354023973	Apr 27, 2021 (155)
23	GNOMAD	ss4354023975	Apr 27, 2021 (155)
24	GNOMAD	ss4354023976	Apr 27, 2021 (155)
25	GNOMAD	ss4354023977	Apr 27, 2021 (155)
26	GNOMAD	ss4354023978	Apr 27, 2021 (155)
27	GNOMAD	ss4354023979	Apr 27, 2021 (155)
28	TOMMO_GENOMICS	ss5229811132	Apr 27, 2021 (155)
29	TOMMO_GENOMICS	ss5229811133	Apr 27, 2021 (155)
30	TOMMO_GENOMICS	ss5229811134	Apr 27, 2021 (155)
31	TOMMO_GENOMICS	ss5229811135	Apr 27, 2021 (155)
32	TOMMO_GENOMICS	ss5229811136	Apr 27, 2021 (155)
33	1000G_HIGH_COVERAGE	ss5308923345	Oct 16, 2022 (156)
34	1000G_HIGH_COVERAGE	ss5308923346	Oct 16, 2022 (156)
35	HUGCELL_USP	ss5501189891	Oct 16, 2022 (156)
36	HUGCELL_USP	ss5501189892	Oct 16, 2022 (156)
37	HUGCELL_USP	ss5501189893	Oct 16, 2022 (156)
38	HUGCELL_USP	ss5501189894	Oct 16, 2022 (156)
39	TOMMO_GENOMICS	ss5789660623	Oct 16, 2022 (156)
40	TOMMO_GENOMICS	ss5789660624	Oct 16, 2022 (156)
41	TOMMO_GENOMICS	ss5789660625	Oct 16, 2022 (156)
42	TOMMO_GENOMICS	ss5789660626	Oct 16, 2022 (156)
43	TOMMO_GENOMICS	ss5789660627	Oct 16, 2022 (156)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
47	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
51	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
52	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 552900198 (NC_000020.11:44722465::T 30870/98628) Row 552900199 (NC_000020.11:44722465::TT 6896/98500) Row 552900200 (NC_000020.11:44722465::TTT 109/98584)...	-	Apr 27, 2021 (155)
55	8.3KJPN Submission ignored due to conflicting rows: Row 87780439 (NC_000020.10:43351106:TT: 11/15528) Row 87780440 (NC_000020.10:43351106::T 3193/15528) Row 87780441 (NC_000020.10:43351106:TTT: 13/15528)...	-	Apr 27, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 87780439 (NC_000020.10:43351106:TT: 11/15528) Row 87780440 (NC_000020.10:43351106::T 3193/15528) Row 87780441 (NC_000020.10:43351106:TTT: 13/15528)...	-	Apr 27, 2021 (155)
57	8.3KJPN Submission ignored due to conflicting rows: Row 87780439 (NC_000020.10:43351106:TT: 11/15528) Row 87780440 (NC_000020.10:43351106::T 3193/15528) Row 87780441 (NC_000020.10:43351106:TTT: 13/15528)...	-	Apr 27, 2021 (155)
58	8.3KJPN Submission ignored due to conflicting rows: Row 87780439 (NC_000020.10:43351106:TT: 11/15528) Row 87780440 (NC_000020.10:43351106::T 3193/15528) Row 87780441 (NC_000020.10:43351106:TTT: 13/15528)...	-	Apr 27, 2021 (155)
59	8.3KJPN Submission ignored due to conflicting rows: Row 87780439 (NC_000020.10:43351106:TT: 11/15528) Row 87780440 (NC_000020.10:43351106::T 3193/15528) Row 87780441 (NC_000020.10:43351106:TTT: 13/15528)...	-	Apr 27, 2021 (155)
60	14KJPN Submission ignored due to conflicting rows: Row 123497727 (NC_000020.11:44722465:TT: 32/27386) Row 123497728 (NC_000020.11:44722465:TTT: 131/27386) Row 123497729 (NC_000020.11:44722465:T: 7290/27386)...	-	Oct 16, 2022 (156)
61	14KJPN Submission ignored due to conflicting rows: Row 123497727 (NC_000020.11:44722465:TT: 32/27386) Row 123497728 (NC_000020.11:44722465:TTT: 131/27386) Row 123497729 (NC_000020.11:44722465:T: 7290/27386)...	-	Oct 16, 2022 (156)
62	14KJPN Submission ignored due to conflicting rows: Row 123497727 (NC_000020.11:44722465:TT: 32/27386) Row 123497728 (NC_000020.11:44722465:TTT: 131/27386) Row 123497729 (NC_000020.11:44722465:T: 7290/27386)...	-	Oct 16, 2022 (156)
63	14KJPN Submission ignored due to conflicting rows: Row 123497727 (NC_000020.11:44722465:TT: 32/27386) Row 123497728 (NC_000020.11:44722465:TTT: 131/27386) Row 123497729 (NC_000020.11:44722465:T: 7290/27386)...	-	Oct 16, 2022 (156)
64	14KJPN Submission ignored due to conflicting rows: Row 123497727 (NC_000020.11:44722465:TT: 32/27386) Row 123497728 (NC_000020.11:44722465:TTT: 131/27386) Row 123497729 (NC_000020.11:44722465:T: 7290/27386)...	-	Oct 16, 2022 (156)
65	ALFA	NC_000020.11 - 44722466	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs35585437	May 11, 2012 (137)
rs71197576	May 11, 2012 (137)
rs72026657	May 11, 2012 (137)
rs35687775	May 11, 2012 (137)
rs71723287	May 11, 2012 (137)
rs71998317	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT	(self)
ss4354023979	NC_000020.11:44722465:TTTTT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4354023978	NC_000020.11:44722465:TTTT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss5229811134	NC_000020.10:43351106:TTT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3707015460, ss4354023977, ss5308923345, ss5789660624	NC_000020.11:44722465:TTT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3018238778, ss3793546169, ss3798433115, ss5229811132	NC_000020.10:43351106:TT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4354023976, ss5501189892, ss5789660623	NC_000020.11:44722465:TT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss3793546170, ss3798433116, ss3835688895, ss5229811135	NC_000020.10:43351106:T:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4354023975, ss5308923346, ss5501189893, ss5789660625	NC_000020.11:44722465:T:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss3707015463	NC_000020.11:44722467:T:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss41383677	NT_011362.10:13547217:T:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss295049769	NC_000020.9:42784521::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss295049770	NC_000020.9:42784540::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss664477342, ss5229811133	NC_000020.10:43351106::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023968, ss5501189891, ss5789660626	NC_000020.11:44722465::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss41398634	NT_011362.10:13547217::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss95740878	NT_011362.10:13547218::T	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss5229811136	NC_000020.10:43351106::TT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023969, ss5501189894, ss5789660627	NC_000020.11:44722465::TT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss3707015464	NC_000020.11:44722468::TT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss96247796	NT_011362.10:13547200:T:TTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023970	NC_000020.11:44722465::TTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
13253818026	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023971	NC_000020.11:44722465::TTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023972	NC_000020.11:44722465::TTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT	(self)
ss4354023973	NC_000020.11:44722465::TTTTTTT	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT	(self)

Removed from this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Destination RSIDs
ss3361386994	NC_000020.11:44722465:TTTTTTTTTT:	NC_000020.11:44722465:TTTTTTTTTTTT… NC_000020.11:44722465:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11341536

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11341536