Name: rs11289281
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11289281

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr10:119940188-119940205 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₇ / delTTT / delTT / delT / …
del(T)₇ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.0676 (612/9058, ALFA)
delT=0.3259 (1632/5008, 1000G)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SEC23IP : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	9058	TTTTTTTTTTTTTTTTTT=0.8835	TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0489, TTTTTTTTTTTTTTTTTTT=0.0676, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000	0.898268	0.026592	0.07514	32
European	Sub	7126	TTTTTTTTTTTTTTTTTT=0.8522	TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0620, TTTTTTTTTTTTTTTTTTT=0.0857, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000	0.866943	0.03478	0.098277	32
African	Sub	1350	TTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	48	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1302	TTTTTTTTTTTTTTTTTT=1.0000	TTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	58	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	44	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	14	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	54	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	246	TTTTTTTTTTTTTTTTTT=1.000	TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	24	TTTTTTTTTTTTTTTTTT=1.00	TTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	200	TTTTTTTTTTTTTTTTTT=0.990	TTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.005, TTTTTTTTTTTTTTTTTTT=0.005, TTTTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	9058	(T)₁₈=0.8835	del(T)₇=0.0000, delTT=0.0000, delT=0.0489, dupT=0.0676, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	7126	(T)₁₈=0.8522	del(T)₇=0.0000, delTT=0.0000, delT=0.0620, dupT=0.0857, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	1350	(T)₁₈=1.0000	del(T)₇=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	246	(T)₁₈=1.000	del(T)₇=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	200	(T)₁₈=0.990	del(T)₇=0.000, delTT=0.000, delT=0.005, dupT=0.005, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Asian	Sub	58	(T)₁₈=1.00	del(T)₇=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	54	(T)₁₈=1.00	del(T)₇=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	24	(T)₁₈=1.00	del(T)₇=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
1000Genomes	Global	Study-wide	5008	(T)₁₈=0.6741	delT=0.3259
1000Genomes	African	Sub	1322	(T)₁₈=0.7171	delT=0.2829
1000Genomes	East Asian	Sub	1008	(T)₁₈=0.7252	delT=0.2748
1000Genomes	Europe	Sub	1006	(T)₁₈=0.7097	delT=0.2903
1000Genomes	South Asian	Sub	978	(T)₁₈=0.500	delT=0.500
1000Genomes	American	Sub	694	(T)₁₈=0.712	delT=0.288

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 10	NC_000010.11:g.119940199_119940205del
GRCh38.p14 chr 10	NC_000010.11:g.119940203_119940205del
GRCh38.p14 chr 10	NC_000010.11:g.119940204_119940205del
GRCh38.p14 chr 10	NC_000010.11:g.119940205del
GRCh38.p14 chr 10	NC_000010.11:g.119940205dup
GRCh38.p14 chr 10	NC_000010.11:g.119940204_119940205dup
GRCh38.p14 chr 10	NC_000010.11:g.119940203_119940205dup
GRCh38.p14 chr 10	NC_000010.11:g.119940202_119940205dup
GRCh38.p14 chr 10	NC_000010.11:g.119940201_119940205dup
GRCh37.p13 chr 10	NC_000010.10:g.121699711_121699717del
GRCh37.p13 chr 10	NC_000010.10:g.121699715_121699717del
GRCh37.p13 chr 10	NC_000010.10:g.121699716_121699717del
GRCh37.p13 chr 10	NC_000010.10:g.121699717del
GRCh37.p13 chr 10	NC_000010.10:g.121699717dup
GRCh37.p13 chr 10	NC_000010.10:g.121699716_121699717dup
GRCh37.p13 chr 10	NC_000010.10:g.121699715_121699717dup
GRCh37.p13 chr 10	NC_000010.10:g.121699714_121699717dup
GRCh37.p13 chr 10	NC_000010.10:g.121699713_121699717dup

Gene: SEC23IP, SEC23 interacting protein (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SEC23IP transcript variant 1	NM_007190.4:c.21-387_21… NM_007190.4:c.21-387_21-381del	N/A	Intron Variant
SEC23IP transcript variant 2	NR_037771.2:n.	N/A	Intron Variant
SEC23IP transcript variant X3	XM_005269469.4:c.21-387_… XM_005269469.4:c.21-387_*21-381del	N/A	Intron Variant
SEC23IP transcript variant X2	XM_047424537.1:c.	N/A	Genic Downstream Transcript Variant
SEC23IP transcript variant X3	XR_007061940.1:n.	N/A	Intron Variant
SEC23IP transcript variant X1	XR_246061.3:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₈=	del(T)₇	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅
GRCh38.p14 chr 10	NC_000010.11:g.119940188_119940205=	NC_000010.11:g.119940199_119940205del	NC_000010.11:g.119940203_119940205del	NC_000010.11:g.119940204_119940205del	NC_000010.11:g.119940205del	NC_000010.11:g.119940205dup	NC_000010.11:g.119940204_119940205dup	NC_000010.11:g.119940203_119940205dup	NC_000010.11:g.119940202_119940205dup	NC_000010.11:g.119940201_119940205dup
GRCh37.p13 chr 10	NC_000010.10:g.121699700_121699717=	NC_000010.10:g.121699711_121699717del	NC_000010.10:g.121699715_121699717del	NC_000010.10:g.121699716_121699717del	NC_000010.10:g.121699717del	NC_000010.10:g.121699717dup	NC_000010.10:g.121699716_121699717dup	NC_000010.10:g.121699715_121699717dup	NC_000010.10:g.121699714_121699717dup	NC_000010.10:g.121699713_121699717dup
SEC23IP transcript variant 1	NM_007190.3:c.*21-398=	NM_007190.3:c.21-387_21-381del	NM_007190.3:c.21-383_21-381del	NM_007190.3:c.21-382_21-381del	NM_007190.3:c.*21-381del	NM_007190.3:c.*21-381dup	NM_007190.3:c.21-382_21-381dup	NM_007190.3:c.21-383_21-381dup	NM_007190.3:c.21-384_21-381dup	NM_007190.3:c.21-385_21-381dup
SEC23IP transcript variant 1	NM_007190.4:c.*21-398=	NM_007190.4:c.21-387_21-381del	NM_007190.4:c.21-383_21-381del	NM_007190.4:c.21-382_21-381del	NM_007190.4:c.*21-381del	NM_007190.4:c.*21-381dup	NM_007190.4:c.21-382_21-381dup	NM_007190.4:c.21-383_21-381dup	NM_007190.4:c.21-384_21-381dup	NM_007190.4:c.21-385_21-381dup
SEC23IP transcript variant X1	XM_005269469.1:c.*21-398=	XM_005269469.1:c.21-387_21-381del	XM_005269469.1:c.21-383_21-381del	XM_005269469.1:c.21-382_21-381del	XM_005269469.1:c.*21-381del	XM_005269469.1:c.*21-381dup	XM_005269469.1:c.21-382_21-381dup	XM_005269469.1:c.21-383_21-381dup	XM_005269469.1:c.21-384_21-381dup	XM_005269469.1:c.21-385_21-381dup
SEC23IP transcript variant X3	XM_005269469.4:c.*21-398=	XM_005269469.4:c.21-387_21-381del	XM_005269469.4:c.21-383_21-381del	XM_005269469.4:c.21-382_21-381del	XM_005269469.4:c.*21-381del	XM_005269469.4:c.*21-381dup	XM_005269469.4:c.21-382_21-381dup	XM_005269469.4:c.21-383_21-381dup	XM_005269469.4:c.21-384_21-381dup	XM_005269469.4:c.21-385_21-381dup
SEC23IP transcript variant X2	XM_005269470.1:c.*21-398=	XM_005269470.1:c.21-387_21-381del	XM_005269470.1:c.21-383_21-381del	XM_005269470.1:c.21-382_21-381del	XM_005269470.1:c.*21-381del	XM_005269470.1:c.*21-381dup	XM_005269470.1:c.21-382_21-381dup	XM_005269470.1:c.21-383_21-381dup	XM_005269470.1:c.21-384_21-381dup	XM_005269470.1:c.21-385_21-381dup
SEC23IP transcript variant X3	XM_005269471.1:c.*21-398=	XM_005269471.1:c.21-387_21-381del	XM_005269471.1:c.21-383_21-381del	XM_005269471.1:c.21-382_21-381del	XM_005269471.1:c.*21-381del	XM_005269471.1:c.*21-381dup	XM_005269471.1:c.21-382_21-381dup	XM_005269471.1:c.21-383_21-381dup	XM_005269471.1:c.21-384_21-381dup	XM_005269471.1:c.21-385_21-381dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

36 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss39836965	Dec 03, 2013 (138)
2	HUMANGENOME_JCVI	ss95554856	Feb 05, 2009 (137)
3	HUMANGENOME_JCVI	ss97610162	Feb 05, 2009 (137)
4	BILGI_BIOE	ss666518185	Apr 25, 2013 (138)
5	1000GENOMES	ss1370208429	Aug 21, 2014 (142)
6	URBANLAB	ss3649480891	Oct 12, 2018 (152)
7	KHV_HUMAN_GENOMES	ss3814042835	Jul 13, 2019 (153)
8	EVA	ss3832365486	Apr 26, 2020 (154)
9	GNOMAD	ss4226836463	Apr 26, 2021 (155)
10	GNOMAD	ss4226836464	Apr 26, 2021 (155)
11	GNOMAD	ss4226836465	Apr 26, 2021 (155)
12	GNOMAD	ss4226836466	Apr 26, 2021 (155)
13	GNOMAD	ss4226836467	Apr 26, 2021 (155)
14	GNOMAD	ss4226836468	Apr 26, 2021 (155)
15	GNOMAD	ss4226836469	Apr 26, 2021 (155)
16	GNOMAD	ss4226836470	Apr 26, 2021 (155)
17	GNOMAD	ss4226836471	Apr 26, 2021 (155)
18	TOMMO_GENOMICS	ss5199774658	Apr 26, 2021 (155)
19	TOMMO_GENOMICS	ss5199774659	Apr 26, 2021 (155)
20	TOMMO_GENOMICS	ss5199774660	Apr 26, 2021 (155)
21	TOMMO_GENOMICS	ss5199774661	Apr 26, 2021 (155)
22	1000G_HIGH_COVERAGE	ss5285700362	Oct 16, 2022 (156)
23	1000G_HIGH_COVERAGE	ss5285700363	Oct 16, 2022 (156)
24	1000G_HIGH_COVERAGE	ss5285700364	Oct 16, 2022 (156)
25	1000G_HIGH_COVERAGE	ss5285700365	Oct 16, 2022 (156)
26	HUGCELL_USP	ss5481099796	Oct 16, 2022 (156)
27	HUGCELL_USP	ss5481099797	Oct 16, 2022 (156)
28	HUGCELL_USP	ss5481099798	Oct 16, 2022 (156)
29	TOMMO_GENOMICS	ss5746232886	Oct 16, 2022 (156)
30	TOMMO_GENOMICS	ss5746232887	Oct 16, 2022 (156)
31	TOMMO_GENOMICS	ss5746232889	Oct 16, 2022 (156)
32	TOMMO_GENOMICS	ss5746232890	Oct 16, 2022 (156)
33	TOMMO_GENOMICS	ss5746232891	Oct 16, 2022 (156)
34	EVA	ss5825048945	Oct 16, 2022 (156)
35	EVA	ss5825048946	Oct 16, 2022 (156)
36	EVA	ss5849768932	Oct 16, 2022 (156)
37	1000Genomes	NC_000010.10 - 121699700	Oct 12, 2018 (152)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
40	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
41	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
42	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
43	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
44	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
45	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
46	gnomAD - Genomes Submission ignored due to conflicting rows: Row 365900647 (NC_000010.11:119940187::T 24132/117570) Row 365900648 (NC_000010.11:119940187::TT 1110/117570) Row 365900649 (NC_000010.11:119940187::TTT 7/117580)...	-	Apr 26, 2021 (155)
47	8.3KJPN Submission ignored due to conflicting rows: Row 57743965 (NC_000010.10:121699699:T: 2967/16720) Row 57743966 (NC_000010.10:121699699::T 963/16720) Row 57743967 (NC_000010.10:121699699:TT: 2/16720)...	-	Apr 26, 2021 (155)
48	8.3KJPN Submission ignored due to conflicting rows: Row 57743965 (NC_000010.10:121699699:T: 2967/16720) Row 57743966 (NC_000010.10:121699699::T 963/16720) Row 57743967 (NC_000010.10:121699699:TT: 2/16720)...	-	Apr 26, 2021 (155)
49	8.3KJPN Submission ignored due to conflicting rows: Row 57743965 (NC_000010.10:121699699:T: 2967/16720) Row 57743966 (NC_000010.10:121699699::T 963/16720) Row 57743967 (NC_000010.10:121699699:TT: 2/16720)...	-	Apr 26, 2021 (155)
50	8.3KJPN Submission ignored due to conflicting rows: Row 57743965 (NC_000010.10:121699699:T: 2967/16720) Row 57743966 (NC_000010.10:121699699::T 963/16720) Row 57743967 (NC_000010.10:121699699:TT: 2/16720)...	-	Apr 26, 2021 (155)
51	14KJPN Submission ignored due to conflicting rows: Row 80069990 (NC_000010.11:119940187::T 1676/28252) Row 80069991 (NC_000010.11:119940187:T: 5554/28252) Row 80069993 (NC_000010.11:119940187::TT 2/28252)...	-	Oct 16, 2022 (156)
52	14KJPN Submission ignored due to conflicting rows: Row 80069990 (NC_000010.11:119940187::T 1676/28252) Row 80069991 (NC_000010.11:119940187:T: 5554/28252) Row 80069993 (NC_000010.11:119940187::TT 2/28252)...	-	Oct 16, 2022 (156)
53	14KJPN Submission ignored due to conflicting rows: Row 80069990 (NC_000010.11:119940187::T 1676/28252) Row 80069991 (NC_000010.11:119940187:T: 5554/28252) Row 80069993 (NC_000010.11:119940187::TT 2/28252)...	-	Oct 16, 2022 (156)
54	14KJPN Submission ignored due to conflicting rows: Row 80069990 (NC_000010.11:119940187::T 1676/28252) Row 80069991 (NC_000010.11:119940187:T: 5554/28252) Row 80069993 (NC_000010.11:119940187::TT 2/28252)...	-	Oct 16, 2022 (156)
55	14KJPN Submission ignored due to conflicting rows: Row 80069990 (NC_000010.11:119940187::T 1676/28252) Row 80069991 (NC_000010.11:119940187:T: 5554/28252) Row 80069993 (NC_000010.11:119940187::TT 2/28252)...	-	Oct 16, 2022 (156)
56	ALFA	NC_000010.11 - 119940188	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs35458981	May 11, 2012 (137)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4226836471	NC_000010.11:119940187:TTTTTTT:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss4226836470, ss5746232891	NC_000010.11:119940187:TTT:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss5199774660, ss5825048946	NC_000010.10:121699699:TT:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4226836469, ss5285700365, ss5746232890	NC_000010.11:119940187:TT:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
51786489, ss1370208429, ss3832365486, ss5199774658	NC_000010.10:121699699:T:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3649480891, ss3814042835, ss4226836468, ss5285700362, ss5481099796, ss5746232887, ss5849768932	NC_000010.11:119940187:T:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss39836965, ss95554856, ss97610162	NT_030059.13:72504180:T:	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss666518185, ss5199774659, ss5825048945	NC_000010.10:121699699::T	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss4226836463, ss5285700363, ss5481099797, ss5746232886	NC_000010.11:119940187::T	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
ss5199774661	NC_000010.10:121699699::TT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4226836464, ss5285700364, ss5481099798, ss5746232889	NC_000010.11:119940187::TT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT	(self)
ss4226836465	NC_000010.11:119940187::TTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
31519270	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT	(self)
ss4226836466	NC_000010.11:119940187::TTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT	(self)
ss4226836467	NC_000010.11:119940187::TTTTT	NC_000010.11:119940187:TTTTTTTTTTT… NC_000010.11:119940187:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11289281

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11289281