Name: rs111729742
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs111729742

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:66579044-66579055 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delTT / delT / dupT / dupTT / dupT…
delTT / delT / dupT / dupTT / dupTTT
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.1871 (937/5008, 1000G)
delTT=0.0000 (0/3014, ALFA)
delT=0.0000 (0/3014, ALFA) (+ 3 more)
dupT=0.0000 (0/3014, ALFA)
dupTT=0.0000 (0/3014, ALFA)
dupTTT=0.0000 (0/3014, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC01798 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	3014	TTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000	1.0	N/A
European	Sub	2066	TTTTTTTTTTTT=1.0000	TTTTTTTTTT=0.0000, TTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000	1.0	N/A
African	Sub	532	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	N/A
African Others	Sub	8	TTTTTTTTTTTT=1.0	TTTTTTTTTT=0.0, TTTTTTTTTTT=0.0, TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTT=0.0	1.0	N/A
African American	Sub	524	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	N/A
Asian	Sub	38	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A
East Asian	Sub	22	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A
Other Asian	Sub	16	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 1	Sub	44	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A
Latin American 2	Sub	214	TTTTTTTTTTTT=1.000	TTTTTTTTTT=0.000, TTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000	1.0	N/A
South Asian	Sub	24	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A
Other	Sub	96	TTTTTTTTTTTT=1.00	TTTTTTTTTT=0.00, TTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupT=0.1871
1000Genomes	African	Sub	1322	- No frequency provided	dupT=0.2890
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupT=0.0605
1000Genomes	Europe	Sub	1006	- No frequency provided	dupT=0.2833
1000Genomes	South Asian	Sub	978	- No frequency provided	dupT=0.105
1000Genomes	American	Sub	694	- No frequency provided	dupT=0.153
Allele Frequency Aggregator	Total	Global	3014	(T)₁₂=1.0000	delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	European	Sub	2066	(T)₁₂=1.0000	delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000
Allele Frequency Aggregator	African	Sub	532	(T)₁₂=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Latin American 2	Sub	214	(T)₁₂=1.000	delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000
Allele Frequency Aggregator	Other	Sub	96	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Latin American 1	Sub	44	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	Asian	Sub	38	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00
Allele Frequency Aggregator	South Asian	Sub	24	(T)₁₂=1.00	delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.66579054_66579055del
GRCh38.p14 chr 2	NC_000002.12:g.66579055del
GRCh38.p14 chr 2	NC_000002.12:g.66579055dup
GRCh38.p14 chr 2	NC_000002.12:g.66579054_66579055dup
GRCh38.p14 chr 2	NC_000002.12:g.66579053_66579055dup
GRCh37.p13 chr 2	NC_000002.11:g.66806186_66806187del
GRCh37.p13 chr 2	NC_000002.11:g.66806187del
GRCh37.p13 chr 2	NC_000002.11:g.66806187dup
GRCh37.p13 chr 2	NC_000002.11:g.66806186_66806187dup
GRCh37.p13 chr 2	NC_000002.11:g.66806185_66806187dup
HHC2:067347 genomic region	NG_055605.1:g.4380_4381del
HHC2:067347 genomic region	NG_055605.1:g.4381del
HHC2:067347 genomic region	NG_055605.1:g.4381dup
HHC2:067347 genomic region	NG_055605.1:g.4380_4381dup
HHC2:067347 genomic region	NG_055605.1:g.4379_4381dup

Gene: LINC01798, long intergenic non-protein coding RNA 1798 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC01798 transcript	NR_110156.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₂=	delTT	delT	dupT	dupTT	dupTTT
GRCh38.p14 chr 2	NC_000002.12:g.66579044_66579055=	NC_000002.12:g.66579054_66579055del	NC_000002.12:g.66579055del	NC_000002.12:g.66579055dup	NC_000002.12:g.66579054_66579055dup	NC_000002.12:g.66579053_66579055dup
GRCh37.p13 chr 2	NC_000002.11:g.66806176_66806187=	NC_000002.11:g.66806186_66806187del	NC_000002.11:g.66806187del	NC_000002.11:g.66806187dup	NC_000002.11:g.66806186_66806187dup	NC_000002.11:g.66806185_66806187dup
HHC2:067347 genomic region	NG_055605.1:g.4370_4381=	NG_055605.1:g.4380_4381del	NG_055605.1:g.4381del	NG_055605.1:g.4381dup	NG_055605.1:g.4380_4381dup	NG_055605.1:g.4379_4381dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

49 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss81771688	Dec 04, 2013 (138)
2	BUSHMAN	ss193544027	Jul 04, 2010 (132)
3	GMI	ss288174186	May 04, 2012 (137)
4	SSMP	ss663321748	Apr 01, 2015 (144)
5	BILGI_BIOE	ss666151375	Apr 25, 2013 (138)
6	1000GENOMES	ss1368262527	Aug 21, 2014 (142)
7	EVA_UK10K_TWINSUK	ss1702672157	Apr 01, 2015 (144)
8	EVA_UK10K_ALSPAC	ss1702672160	Apr 01, 2015 (144)
9	EVA_UK10K_ALSPAC	ss1710007081	Apr 01, 2015 (144)
10	EVA_UK10K_TWINSUK	ss1710007082	Apr 01, 2015 (144)
11	SYSTEMSBIOZJU	ss2624819388	Nov 08, 2017 (151)
12	MCHAISSO	ss3064791141	Nov 08, 2017 (151)
13	MCHAISSO	ss3065745415	Nov 08, 2017 (151)
14	BEROUKHIMLAB	ss3644093590	Oct 11, 2018 (152)
15	BIOINF_KMB_FNS_UNIBA	ss3645557603	Oct 11, 2018 (152)
16	EVA_DECODE	ss3704088363	Jul 13, 2019 (153)
17	EVA_DECODE	ss3704088364	Jul 13, 2019 (153)
18	EVA_DECODE	ss3704088365	Jul 13, 2019 (153)
19	EVA_DECODE	ss3704088366	Jul 13, 2019 (153)
20	ACPOP	ss3728518168	Jul 13, 2019 (153)
21	ACPOP	ss3728518169	Jul 13, 2019 (153)
22	PACBIO	ss3783887913	Jul 13, 2019 (153)
23	KHV_HUMAN_GENOMES	ss3801248984	Jul 13, 2019 (153)
24	KHV_HUMAN_GENOMES	ss3801248985	Jul 13, 2019 (153)
25	EVA	ss3827030134	Apr 25, 2020 (154)
26	EVA	ss3836924647	Apr 25, 2020 (154)
27	EVA	ss3842340555	Apr 25, 2020 (154)
28	KOGIC	ss3947948451	Apr 25, 2020 (154)
29	KOGIC	ss3947948452	Apr 25, 2020 (154)
30	KOGIC	ss3947948453	Apr 25, 2020 (154)
31	GNOMAD	ss4043066449	Apr 26, 2021 (155)
32	GNOMAD	ss4043066450	Apr 26, 2021 (155)
33	GNOMAD	ss4043066451	Apr 26, 2021 (155)
34	GNOMAD	ss4043066452	Apr 26, 2021 (155)
35	GNOMAD	ss4043066453	Apr 26, 2021 (155)
36	TOMMO_GENOMICS	ss5151822098	Apr 26, 2021 (155)
37	TOMMO_GENOMICS	ss5151822099	Apr 26, 2021 (155)
38	TOMMO_GENOMICS	ss5151822100	Apr 26, 2021 (155)
39	1000G_HIGH_COVERAGE	ss5248408718	Oct 12, 2022 (156)
40	1000G_HIGH_COVERAGE	ss5248408719	Oct 12, 2022 (156)
41	1000G_HIGH_COVERAGE	ss5248408720	Oct 12, 2022 (156)
42	HUGCELL_USP	ss5448580062	Oct 12, 2022 (156)
43	HUGCELL_USP	ss5448580063	Oct 12, 2022 (156)
44	HUGCELL_USP	ss5448580064	Oct 12, 2022 (156)
45	TOMMO_GENOMICS	ss5680578070	Oct 12, 2022 (156)
46	TOMMO_GENOMICS	ss5680578071	Oct 12, 2022 (156)
47	TOMMO_GENOMICS	ss5680578072	Oct 12, 2022 (156)
48	EVA	ss5820232222	Oct 12, 2022 (156)
49	EVA	ss5820232223	Oct 12, 2022 (156)
50	1000Genomes	NC_000002.11 - 66806176	Oct 11, 2018 (152)
51	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 4787201 (NC_000002.11:66806175::T 1192/3854) Row 4787202 (NC_000002.11:66806175:T: 561/3854)	-	Oct 11, 2018 (152)
52	The Avon Longitudinal Study of Parents and Children Submission ignored due to conflicting rows: Row 4787201 (NC_000002.11:66806175::T 1192/3854) Row 4787202 (NC_000002.11:66806175:T: 561/3854)	-	Oct 11, 2018 (152)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 61135662 (NC_000002.12:66579043::T 41709/135962) Row 61135663 (NC_000002.12:66579043::TT 252/136082) Row 61135664 (NC_000002.12:66579043::TTT 1/136102)...	-	Apr 26, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 61135662 (NC_000002.12:66579043::T 41709/135962) Row 61135663 (NC_000002.12:66579043::TT 252/136082) Row 61135664 (NC_000002.12:66579043::TTT 1/136102)...	-	Apr 26, 2021 (155)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 61135662 (NC_000002.12:66579043::T 41709/135962) Row 61135663 (NC_000002.12:66579043::TT 252/136082) Row 61135664 (NC_000002.12:66579043::TTT 1/136102)...	-	Apr 26, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 61135662 (NC_000002.12:66579043::T 41709/135962) Row 61135663 (NC_000002.12:66579043::TT 252/136082) Row 61135664 (NC_000002.12:66579043::TTT 1/136102)...	-	Apr 26, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 61135662 (NC_000002.12:66579043::T 41709/135962) Row 61135663 (NC_000002.12:66579043::TT 252/136082) Row 61135664 (NC_000002.12:66579043::TTT 1/136102)...	-	Apr 26, 2021 (155)
58	Korean Genome Project Submission ignored due to conflicting rows: Row 4326452 (NC_000002.12:66579044:T: 788/1832) Row 4326453 (NC_000002.12:66579045::T 97/1832) Row 4326454 (NC_000002.12:66579043:TT: 9/1832)	-	Apr 25, 2020 (154)
59	Korean Genome Project Submission ignored due to conflicting rows: Row 4326452 (NC_000002.12:66579044:T: 788/1832) Row 4326453 (NC_000002.12:66579045::T 97/1832) Row 4326454 (NC_000002.12:66579043:TT: 9/1832)	-	Apr 25, 2020 (154)
60	Korean Genome Project Submission ignored due to conflicting rows: Row 4326452 (NC_000002.12:66579044:T: 788/1832) Row 4326453 (NC_000002.12:66579045::T 97/1832) Row 4326454 (NC_000002.12:66579043:TT: 9/1832)	-	Apr 25, 2020 (154)
61	Northern Sweden Submission ignored due to conflicting rows: Row 1803033 (NC_000002.11:66806175::T 162/600) Row 1803034 (NC_000002.11:66806175:T: 114/600)	-	Jul 13, 2019 (153)
62	Northern Sweden Submission ignored due to conflicting rows: Row 1803033 (NC_000002.11:66806175::T 162/600) Row 1803034 (NC_000002.11:66806175:T: 114/600)	-	Jul 13, 2019 (153)
63	8.3KJPN Submission ignored due to conflicting rows: Row 9791405 (NC_000002.11:66806175::T 1666/16760) Row 9791406 (NC_000002.11:66806175:T: 7156/16760) Row 9791407 (NC_000002.11:66806175::TT 4/16760)	-	Apr 26, 2021 (155)
64	8.3KJPN Submission ignored due to conflicting rows: Row 9791405 (NC_000002.11:66806175::T 1666/16760) Row 9791406 (NC_000002.11:66806175:T: 7156/16760) Row 9791407 (NC_000002.11:66806175::TT 4/16760)	-	Apr 26, 2021 (155)
65	8.3KJPN Submission ignored due to conflicting rows: Row 9791405 (NC_000002.11:66806175::T 1666/16760) Row 9791406 (NC_000002.11:66806175:T: 7156/16760) Row 9791407 (NC_000002.11:66806175::TT 4/16760)	-	Apr 26, 2021 (155)
66	14KJPN Submission ignored due to conflicting rows: Row 14415174 (NC_000002.12:66579043:T: 11875/28258) Row 14415175 (NC_000002.12:66579043::T 2939/28258) Row 14415176 (NC_000002.12:66579043::TT 16/28258)	-	Oct 12, 2022 (156)
67	14KJPN Submission ignored due to conflicting rows: Row 14415174 (NC_000002.12:66579043:T: 11875/28258) Row 14415175 (NC_000002.12:66579043::T 2939/28258) Row 14415176 (NC_000002.12:66579043::TT 16/28258)	-	Oct 12, 2022 (156)
68	14KJPN Submission ignored due to conflicting rows: Row 14415174 (NC_000002.12:66579043:T: 11875/28258) Row 14415175 (NC_000002.12:66579043::T 2939/28258) Row 14415176 (NC_000002.12:66579043::TT 16/28258)	-	Oct 12, 2022 (156)
69	UK 10K study - Twins Submission ignored due to conflicting rows: Row 4787201 (NC_000002.11:66806175::T 1149/3708) Row 4787202 (NC_000002.11:66806175:T: 586/3708)	-	Oct 11, 2018 (152)
70	UK 10K study - Twins Submission ignored due to conflicting rows: Row 4787201 (NC_000002.11:66806175::T 1149/3708) Row 4787202 (NC_000002.11:66806175:T: 586/3708)	-	Oct 11, 2018 (152)
71	ALFA	NC_000002.12 - 66579044	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss3704088363, ss3947948453, ss4043066453	NC_000002.12:66579043:TT:	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTT	(self)
790939261	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTT	(self)
ss288174186	NC_000002.10:66659679:T:	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss663321748, ss1702672157, ss1702672160, ss2624819388, ss3644093590, ss3728518169, ss3783887913, ss3827030134, ss3836924647, ss5151822099, ss5820232222	NC_000002.11:66806175:T:	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3064791141, ss3065745415, ss3645557603, ss3801248985, ss3842340555, ss4043066452, ss5248408718, ss5448580062, ss5680578070	NC_000002.12:66579043:T:	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
790939261	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
ss3704088364, ss3947948451	NC_000002.12:66579044:T:	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTT	(self)
8605744, ss666151375, ss1368262527, ss3728518168, ss5151822098, ss5820232223	NC_000002.11:66806175::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss1710007081, ss1710007082	NC_000002.11:66806176::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3801248984, ss4043066449, ss5248408719, ss5448580063, ss5680578071	NC_000002.12:66579043::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
790939261	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3704088365, ss3947948452	NC_000002.12:66579045::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss81771688	NT_022184.15:45628074::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss193544027	NT_022184.16:50432924::T	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss5151822100	NC_000002.11:66806175::TT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4043066450, ss5248408720, ss5448580064, ss5680578072	NC_000002.12:66579043::TT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
790939261	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss3704088366	NC_000002.12:66579045::TT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTT	(self)
ss4043066451	NC_000002.12:66579043::TTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
790939261	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000002.12:66579043:TTTTTTTTTTTT… NC_000002.12:66579043:TTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs111729742

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs111729742