Name: rs10656897
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10656897

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr14:35108392-35108405 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(T)₅ / delTTT / delTT / delT / …
del(T)₅ / delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)₄ / dup(T)₅
Variation Type: Indel Insertion and Deletion
Frequency: del(T)₅=0.000004 (1/264690, TOPMED)
dupTTT=0.02371 (346/14592, ALFA)
dupTTT=0.1158 (580/5008, 1000G) (+ 3 more)
dupTTT=0.0537 (207/3854, ALSPAC)
dupTTT=0.0601 (223/3708, TWINSUK)
delT=0.18 (7/38, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PPP2R3C : Intron Variant
LOC101927178 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	14592	TTTTTTTTTTTTTT=0.95696	TTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.01878, TTTTTTTTTTTTTTT=0.00055, TTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTT=0.02371, TTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.00000	0.956565	0.002421	0.041014	27
European	Sub	11760	TTTTTTTTTTTTTT=0.94668	TTTTTTTTT=0.00000, TTTTTTTTTTTT=0.00000, TTTTTTTTTTTTT=0.02330, TTTTTTTTTTTTTTT=0.00068, TTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTT=0.02934, TTTTTTTTTTTTTTTTTT=0.00000, TTTTTTTTTTTTTTTTTTT=0.00000	0.945772	0.003032	0.051195	19
African	Sub	1724	TTTTTTTTTTTTTT=1.0000	TTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	72	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
African American	Sub	1652	TTTTTTTTTTTTTT=1.0000	TTTTTTTTT=0.0000, TTTTTTTTTTTT=0.0000, TTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTT=0.0000, TTTTTTTTTTTTTTTTTTT=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	96	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	72	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	24	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	98	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Latin American 2	Sub	492	TTTTTTTTTTTTTT=1.000	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	70	TTTTTTTTTTTTTT=1.00	TTTTTTTTT=0.00, TTTTTTTTTTTT=0.00, TTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTT=0.00, TTTTTTTTTTTTTTTTTTT=0.00	1.0	0.0	0.0	N/A
Other	Sub	352	TTTTTTTTTTTTTT=0.997	TTTTTTTTT=0.000, TTTTTTTTTTTT=0.000, TTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTT=0.003, TTTTTTTTTTTTTTTTTT=0.000, TTTTTTTTTTTTTTTTTTT=0.000	0.994318	0.0	0.005682	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(T)₁₄=0.999996	del(T)₅=0.000004
Allele Frequency Aggregator	Total	Global	14592	(T)₁₄=0.95696	del(T)₅=0.00000, delTT=0.00000, delT=0.01878, dupT=0.00055, dupTT=0.00000, dupTTT=0.02371, dup(T)₄=0.00000, dup(T)₅=0.00000
Allele Frequency Aggregator	European	Sub	11760	(T)₁₄=0.94668	del(T)₅=0.00000, delTT=0.00000, delT=0.02330, dupT=0.00068, dupTT=0.00000, dupTTT=0.02934, dup(T)₄=0.00000, dup(T)₅=0.00000
Allele Frequency Aggregator	African	Sub	1724	(T)₁₄=1.0000	del(T)₅=0.0000, delTT=0.0000, delT=0.0000, dupT=0.0000, dupTT=0.0000, dupTTT=0.0000, dup(T)₄=0.0000, dup(T)₅=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	492	(T)₁₄=1.000	del(T)₅=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.000, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	Other	Sub	352	(T)₁₄=0.997	del(T)₅=0.000, delTT=0.000, delT=0.000, dupT=0.000, dupTT=0.000, dupTTT=0.003, dup(T)₄=0.000, dup(T)₅=0.000
Allele Frequency Aggregator	Latin American 1	Sub	98	(T)₁₄=1.00	del(T)₅=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
Allele Frequency Aggregator	Asian	Sub	96	(T)₁₄=1.00	del(T)₅=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
Allele Frequency Aggregator	South Asian	Sub	70	(T)₁₄=1.00	del(T)₅=0.00, delTT=0.00, delT=0.00, dupT=0.00, dupTT=0.00, dupTTT=0.00, dup(T)₄=0.00, dup(T)₅=0.00
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupTTT=0.1158
1000Genomes	African	Sub	1322	- No frequency provided	dupTTT=0.2050
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupTTT=0.0327
1000Genomes	Europe	Sub	1006	- No frequency provided	dupTTT=0.0746
1000Genomes	South Asian	Sub	978	- No frequency provided	dupTTT=0.162
1000Genomes	American	Sub	694	- No frequency provided	dupTTT=0.062
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	- No frequency provided	dupTTT=0.0537
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	- No frequency provided	dupTTT=0.0601
The Danish reference pan genome	Danish	Study-wide	38	(T)₁₄=0.82	delT=0.18

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 14	NC_000014.9:g.35108401_35108405del
GRCh38.p14 chr 14	NC_000014.9:g.35108403_35108405del
GRCh38.p14 chr 14	NC_000014.9:g.35108404_35108405del
GRCh38.p14 chr 14	NC_000014.9:g.35108405del
GRCh38.p14 chr 14	NC_000014.9:g.35108405dup
GRCh38.p14 chr 14	NC_000014.9:g.35108404_35108405dup
GRCh38.p14 chr 14	NC_000014.9:g.35108403_35108405dup
GRCh38.p14 chr 14	NC_000014.9:g.35108402_35108405dup
GRCh38.p14 chr 14	NC_000014.9:g.35108401_35108405dup
GRCh37.p13 chr 14	NC_000014.8:g.35577607_35577611del
GRCh37.p13 chr 14	NC_000014.8:g.35577609_35577611del
GRCh37.p13 chr 14	NC_000014.8:g.35577610_35577611del
GRCh37.p13 chr 14	NC_000014.8:g.35577611del
GRCh37.p13 chr 14	NC_000014.8:g.35577611dup
GRCh37.p13 chr 14	NC_000014.8:g.35577610_35577611dup
GRCh37.p13 chr 14	NC_000014.8:g.35577609_35577611dup
GRCh37.p13 chr 14	NC_000014.8:g.35577608_35577611dup
GRCh37.p13 chr 14	NC_000014.8:g.35577607_35577611dup

Gene: PPP2R3C, protein phosphatase 2 regulatory subunit B''gamma (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PPP2R3C transcript variant 2	NM_001305155.2:c.75-160_7… NM_001305155.2:c.75-160_75-156del	N/A	Intron Variant
PPP2R3C transcript variant 3	NM_001305156.2:c.75-160_7… NM_001305156.2:c.75-160_75-156del	N/A	Intron Variant
PPP2R3C transcript variant 1	NM_017917.4:c.405-160_405… NM_017917.4:c.405-160_405-156del	N/A	Intron Variant
PPP2R3C transcript variant 4	NR_130972.2:n.	N/A	Intron Variant
PPP2R3C transcript variant X1	XM_005267782.5:c.405-160_… XM_005267782.5:c.405-160_405-156del	N/A	Intron Variant
PPP2R3C transcript variant X2	XM_024449638.2:c.312-160_… XM_024449638.2:c.312-160_312-156del	N/A	Intron Variant
PPP2R3C transcript variant X3	XM_024449639.2:c.249-160_… XM_024449639.2:c.249-160_249-156del	N/A	Intron Variant
PPP2R3C transcript variant X4	XM_047431517.1:c.405-160_… XM_047431517.1:c.405-160_405-156del	N/A	Intron Variant

Gene: LOC101927178, uncharacterized LOC101927178 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC101927178 transcript	NR_110415.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₁₄=	del(T)₅	delTTT	delTT	delT	dupT	dupTT	dupTTT	dup(T)₄	dup(T)₅
GRCh38.p14 chr 14	NC_000014.9:g.35108392_35108405=	NC_000014.9:g.35108401_35108405del	NC_000014.9:g.35108403_35108405del	NC_000014.9:g.35108404_35108405del	NC_000014.9:g.35108405del	NC_000014.9:g.35108405dup	NC_000014.9:g.35108404_35108405dup	NC_000014.9:g.35108403_35108405dup	NC_000014.9:g.35108402_35108405dup	NC_000014.9:g.35108401_35108405dup
GRCh37.p13 chr 14	NC_000014.8:g.35577598_35577611=	NC_000014.8:g.35577607_35577611del	NC_000014.8:g.35577609_35577611del	NC_000014.8:g.35577610_35577611del	NC_000014.8:g.35577611del	NC_000014.8:g.35577611dup	NC_000014.8:g.35577610_35577611dup	NC_000014.8:g.35577609_35577611dup	NC_000014.8:g.35577608_35577611dup	NC_000014.8:g.35577607_35577611dup
PPP2R3C transcript variant 2	NM_001305155.2:c.75-156=	NM_001305155.2:c.75-160_75-156del	NM_001305155.2:c.75-158_75-156del	NM_001305155.2:c.75-157_75-156del	NM_001305155.2:c.75-156del	NM_001305155.2:c.75-156dup	NM_001305155.2:c.75-157_75-156dup	NM_001305155.2:c.75-158_75-156dup	NM_001305155.2:c.75-159_75-156dup	NM_001305155.2:c.75-160_75-156dup
PPP2R3C transcript variant 3	NM_001305156.2:c.75-156=	NM_001305156.2:c.75-160_75-156del	NM_001305156.2:c.75-158_75-156del	NM_001305156.2:c.75-157_75-156del	NM_001305156.2:c.75-156del	NM_001305156.2:c.75-156dup	NM_001305156.2:c.75-157_75-156dup	NM_001305156.2:c.75-158_75-156dup	NM_001305156.2:c.75-159_75-156dup	NM_001305156.2:c.75-160_75-156dup
PPP2R3C transcript	NM_017917.2:c.405-156=	NM_017917.2:c.405-160_405-156del	NM_017917.2:c.405-158_405-156del	NM_017917.2:c.405-157_405-156del	NM_017917.2:c.405-156del	NM_017917.2:c.405-156dup	NM_017917.2:c.405-157_405-156dup	NM_017917.2:c.405-158_405-156dup	NM_017917.2:c.405-159_405-156dup	NM_017917.2:c.405-160_405-156dup
PPP2R3C transcript variant 1	NM_017917.4:c.405-156=	NM_017917.4:c.405-160_405-156del	NM_017917.4:c.405-158_405-156del	NM_017917.4:c.405-157_405-156del	NM_017917.4:c.405-156del	NM_017917.4:c.405-156dup	NM_017917.4:c.405-157_405-156dup	NM_017917.4:c.405-158_405-156dup	NM_017917.4:c.405-159_405-156dup	NM_017917.4:c.405-160_405-156dup
PPP2R3C transcript variant X1	XM_005267782.1:c.405-156=	XM_005267782.1:c.405-160_405-156del	XM_005267782.1:c.405-158_405-156del	XM_005267782.1:c.405-157_405-156del	XM_005267782.1:c.405-156del	XM_005267782.1:c.405-156dup	XM_005267782.1:c.405-157_405-156dup	XM_005267782.1:c.405-158_405-156dup	XM_005267782.1:c.405-159_405-156dup	XM_005267782.1:c.405-160_405-156dup
PPP2R3C transcript variant X1	XM_005267782.5:c.405-156=	XM_005267782.5:c.405-160_405-156del	XM_005267782.5:c.405-158_405-156del	XM_005267782.5:c.405-157_405-156del	XM_005267782.5:c.405-156del	XM_005267782.5:c.405-156dup	XM_005267782.5:c.405-157_405-156dup	XM_005267782.5:c.405-158_405-156dup	XM_005267782.5:c.405-159_405-156dup	XM_005267782.5:c.405-160_405-156dup
PPP2R3C transcript variant X2	XM_005267783.1:c.291+2133=	XM_005267783.1:c.291+2129_291+2133del	XM_005267783.1:c.291+2131_291+2133del	XM_005267783.1:c.291+2132_291+2133del	XM_005267783.1:c.291+2133del	XM_005267783.1:c.291+2133dup	XM_005267783.1:c.291+2132_291+2133dup	XM_005267783.1:c.291+2131_291+2133dup	XM_005267783.1:c.291+2130_291+2133dup	XM_005267783.1:c.291+2129_291+2133dup
PPP2R3C transcript variant X3	XM_005267784.1:c.75-156=	XM_005267784.1:c.75-160_75-156del	XM_005267784.1:c.75-158_75-156del	XM_005267784.1:c.75-157_75-156del	XM_005267784.1:c.75-156del	XM_005267784.1:c.75-156dup	XM_005267784.1:c.75-157_75-156dup	XM_005267784.1:c.75-158_75-156dup	XM_005267784.1:c.75-159_75-156dup	XM_005267784.1:c.75-160_75-156dup
PPP2R3C transcript variant X4	XM_005267785.1:c.405-156=	XM_005267785.1:c.405-160_405-156del	XM_005267785.1:c.405-158_405-156del	XM_005267785.1:c.405-157_405-156del	XM_005267785.1:c.405-156del	XM_005267785.1:c.405-156dup	XM_005267785.1:c.405-157_405-156dup	XM_005267785.1:c.405-158_405-156dup	XM_005267785.1:c.405-159_405-156dup	XM_005267785.1:c.405-160_405-156dup
PPP2R3C transcript variant X2	XM_024449638.2:c.312-156=	XM_024449638.2:c.312-160_312-156del	XM_024449638.2:c.312-158_312-156del	XM_024449638.2:c.312-157_312-156del	XM_024449638.2:c.312-156del	XM_024449638.2:c.312-156dup	XM_024449638.2:c.312-157_312-156dup	XM_024449638.2:c.312-158_312-156dup	XM_024449638.2:c.312-159_312-156dup	XM_024449638.2:c.312-160_312-156dup
PPP2R3C transcript variant X3	XM_024449639.2:c.249-156=	XM_024449639.2:c.249-160_249-156del	XM_024449639.2:c.249-158_249-156del	XM_024449639.2:c.249-157_249-156del	XM_024449639.2:c.249-156del	XM_024449639.2:c.249-156dup	XM_024449639.2:c.249-157_249-156dup	XM_024449639.2:c.249-158_249-156dup	XM_024449639.2:c.249-159_249-156dup	XM_024449639.2:c.249-160_249-156dup
PPP2R3C transcript variant X4	XM_047431517.1:c.405-156=	XM_047431517.1:c.405-160_405-156del	XM_047431517.1:c.405-158_405-156del	XM_047431517.1:c.405-157_405-156del	XM_047431517.1:c.405-156del	XM_047431517.1:c.405-156dup	XM_047431517.1:c.405-157_405-156dup	XM_047431517.1:c.405-158_405-156dup	XM_047431517.1:c.405-159_405-156dup	XM_047431517.1:c.405-160_405-156dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

51 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ABI	ss40468178	Mar 14, 2006 (126)
2	BCMHGSC_JDW	ss103557369	Mar 15, 2016 (147)
3	GMI	ss287915753	Oct 12, 2018 (152)
4	PJP	ss294826941	May 09, 2011 (138)
5	SSMP	ss664221140	Apr 01, 2015 (144)
6	1000GENOMES	ss1373927680	Aug 21, 2014 (142)
7	EVA_GENOME_DK	ss1574739324	Apr 01, 2015 (144)
8	EVA_UK10K_ALSPAC	ss1708009290	Apr 01, 2015 (144)
9	EVA_UK10K_TWINSUK	ss1708009343	Apr 01, 2015 (144)
10	SWEGEN	ss3012004401	Nov 08, 2017 (151)
11	EVA_DECODE	ss3696442373	Jul 13, 2019 (153)
12	EVA_DECODE	ss3696442374	Jul 13, 2019 (153)
13	EVA_DECODE	ss3696442375	Jul 13, 2019 (153)
14	ACPOP	ss3740274050	Jul 13, 2019 (153)
15	ACPOP	ss3740274051	Jul 13, 2019 (153)
16	PACBIO	ss3787632022	Jul 13, 2019 (153)
17	KHV_HUMAN_GENOMES	ss3817507249	Jul 13, 2019 (153)
18	EVA	ss3833855154	Apr 27, 2020 (154)
19	EVA	ss3840520284	Apr 27, 2020 (154)
20	EVA	ss3846008383	Apr 27, 2020 (154)
21	GNOMAD	ss4275944279	Apr 27, 2021 (155)
22	GNOMAD	ss4275944280	Apr 27, 2021 (155)
23	GNOMAD	ss4275944281	Apr 27, 2021 (155)
24	GNOMAD	ss4275944282	Apr 27, 2021 (155)
25	GNOMAD	ss4275944283	Apr 27, 2021 (155)
26	GNOMAD	ss4275944284	Apr 27, 2021 (155)
27	GNOMAD	ss4275944285	Apr 27, 2021 (155)
28	GNOMAD	ss4275944286	Apr 27, 2021 (155)
29	TOPMED	ss4966432957	Apr 27, 2021 (155)
30	TOMMO_GENOMICS	ss5212688608	Apr 27, 2021 (155)
31	TOMMO_GENOMICS	ss5212688609	Apr 27, 2021 (155)
32	TOMMO_GENOMICS	ss5212688610	Apr 27, 2021 (155)
33	TOMMO_GENOMICS	ss5212688611	Apr 27, 2021 (155)
34	1000G_HIGH_COVERAGE	ss5295797059	Oct 16, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5295797060	Oct 16, 2022 (156)
36	1000G_HIGH_COVERAGE	ss5295797061	Oct 16, 2022 (156)
37	1000G_HIGH_COVERAGE	ss5295797062	Oct 16, 2022 (156)
38	1000G_HIGH_COVERAGE	ss5295797063	Oct 16, 2022 (156)
39	HUGCELL_USP	ss5489895585	Oct 16, 2022 (156)
40	HUGCELL_USP	ss5489895586	Oct 16, 2022 (156)
41	HUGCELL_USP	ss5489895587	Oct 16, 2022 (156)
42	HUGCELL_USP	ss5489895588	Oct 16, 2022 (156)
43	EVA	ss5511188623	Oct 16, 2022 (156)
44	TOMMO_GENOMICS	ss5765336579	Oct 16, 2022 (156)
45	TOMMO_GENOMICS	ss5765336580	Oct 16, 2022 (156)
46	TOMMO_GENOMICS	ss5765336581	Oct 16, 2022 (156)
47	TOMMO_GENOMICS	ss5765336582	Oct 16, 2022 (156)
48	EVA	ss5840940069	Oct 16, 2022 (156)
49	EVA	ss5850982204	Oct 16, 2022 (156)
50	EVA	ss5947397720	Oct 16, 2022 (156)
51	EVA	ss5980821989	Oct 16, 2022 (156)
52	1000Genomes	NC_000014.8 - 35577598	Oct 12, 2018 (152)
53	The Avon Longitudinal Study of Parents and Children	NC_000014.8 - 35577598	Oct 12, 2018 (152)
54	The Danish reference pan genome	NC_000014.8 - 35577598	Apr 27, 2020 (154)
55	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
56	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
57	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
58	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
59	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
60	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
61	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
62	gnomAD - Genomes Submission ignored due to conflicting rows: Row 447657541 (NC_000014.9:35108391::T 855/134190) Row 447657542 (NC_000014.9:35108391::TT 177/134202) Row 447657543 (NC_000014.9:35108391::TTT 14363/134110)...	-	Apr 27, 2021 (155)
63	Northern Sweden Submission ignored due to conflicting rows: Row 13558915 (NC_000014.8:35577597::TTT 72/600) Row 13558916 (NC_000014.8:35577597:T: 39/600)	-	Jul 13, 2019 (153)
64	Northern Sweden Submission ignored due to conflicting rows: Row 13558915 (NC_000014.8:35577597::TTT 72/600) Row 13558916 (NC_000014.8:35577597:T: 39/600)	-	Jul 13, 2019 (153)
65	8.3KJPN Submission ignored due to conflicting rows: Row 70657915 (NC_000014.8:35577597::T 17/16760) Row 70657916 (NC_000014.8:35577597:T: 31/16760) Row 70657917 (NC_000014.8:35577597::TTT 654/16760)...	-	Apr 27, 2021 (155)
66	8.3KJPN Submission ignored due to conflicting rows: Row 70657915 (NC_000014.8:35577597::T 17/16760) Row 70657916 (NC_000014.8:35577597:T: 31/16760) Row 70657917 (NC_000014.8:35577597::TTT 654/16760)...	-	Apr 27, 2021 (155)
67	8.3KJPN Submission ignored due to conflicting rows: Row 70657915 (NC_000014.8:35577597::T 17/16760) Row 70657916 (NC_000014.8:35577597:T: 31/16760) Row 70657917 (NC_000014.8:35577597::TTT 654/16760)...	-	Apr 27, 2021 (155)
68	8.3KJPN Submission ignored due to conflicting rows: Row 70657915 (NC_000014.8:35577597::T 17/16760) Row 70657916 (NC_000014.8:35577597:T: 31/16760) Row 70657917 (NC_000014.8:35577597::TTT 654/16760)...	-	Apr 27, 2021 (155)
69	14KJPN Submission ignored due to conflicting rows: Row 99173683 (NC_000014.9:35108391::TTT 1089/28258) Row 99173684 (NC_000014.9:35108391:T: 36/28258) Row 99173685 (NC_000014.9:35108391::TT 1/28258)...	-	Oct 16, 2022 (156)
70	14KJPN Submission ignored due to conflicting rows: Row 99173683 (NC_000014.9:35108391::TTT 1089/28258) Row 99173684 (NC_000014.9:35108391:T: 36/28258) Row 99173685 (NC_000014.9:35108391::TT 1/28258)...	-	Oct 16, 2022 (156)
71	14KJPN Submission ignored due to conflicting rows: Row 99173683 (NC_000014.9:35108391::TTT 1089/28258) Row 99173684 (NC_000014.9:35108391:T: 36/28258) Row 99173685 (NC_000014.9:35108391::TT 1/28258)...	-	Oct 16, 2022 (156)
72	14KJPN Submission ignored due to conflicting rows: Row 99173683 (NC_000014.9:35108391::TTT 1089/28258) Row 99173684 (NC_000014.9:35108391:T: 36/28258) Row 99173685 (NC_000014.9:35108391::TT 1/28258)...	-	Oct 16, 2022 (156)
73	TopMed	NC_000014.9 - 35108392	Apr 27, 2021 (155)
74	UK 10K study - Twins	NC_000014.8 - 35577598	Oct 12, 2018 (152)
75	ALFA	NC_000014.9 - 35108392	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs72318960	May 15, 2013 (138)
rs142746581	Sep 17, 2011 (135)
rs79587839	Oct 12, 2011 (135)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
181978616, ss4275944286, ss4966432957	NC_000014.9:35108391:TTTTT:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTT	(self)
ss5511188623	NC_000014.8:35577597:TTT:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTT
ss4275944285	NC_000014.9:35108391:TT:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
ss103557369	NT_026437.12:16577609:TT:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTT	(self)
442688, ss1574739324, ss3012004401, ss3740274051, ss3787632022, ss5212688609, ss5980821989	NC_000014.8:35577597:T:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss3696442373, ss4275944284, ss5295797059, ss5489895585, ss5765336580	NC_000014.9:35108391:T:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss40468178	NT_026437.12:16577610:T:	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTT	(self)
ss5212688608	NC_000014.8:35577597::T	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss4275944279, ss5295797062, ss5489895588, ss5765336582	NC_000014.9:35108391::T	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss3696442374	NC_000014.9:35108392::T	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT	(self)
ss5212688611	NC_000014.8:35577597::TT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss4275944280, ss5295797063, ss5765336581	NC_000014.9:35108391::TT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT	(self)
ss294826941	NC_000014.7:34647349::TTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
63483032, 35266074, 35266074, ss664221140, ss1373927680, ss1708009290, ss1708009343, ss3740274050, ss3833855154, ss3840520284, ss5212688610, ss5840940069, ss5947397720	NC_000014.8:35577597::TTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3817507249, ss3846008383, ss4275944281, ss5295797060, ss5489895586, ss5765336579, ss5850982204	NC_000014.9:35108391::TTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss3696442375	NC_000014.9:35108392::TTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss287915753	NT_026437.12:16577611::TTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT	(self)
ss4275944282, ss5295797061, ss5489895587	NC_000014.9:35108391::TTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT	(self)
ss4275944283	NC_000014.9:35108391::TTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)
10478823448	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	NC_000014.9:35108391:TTTTTTTTTTTTT… NC_000014.9:35108391:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10656897

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10656897