Name: rs10564479
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10564479

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr7:101958371-101958391 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GCA)₄ / del(GCA)₃ / del(GCA)₂ …
del(GCA)₄ / del(GCA)₃ / del(GCA)₂ / delGCA / dupGCA / dup(GCA)₂
Variation Type: Indel Insertion and Deletion
Frequency: (GCA)₇=0.172368 (45624/264690, TOPMED)
(GCA)₇=0.39748 (6661/16758, 8.3KJPN)
(GCA)₇=0.2153 (1500/6968, ALFA) (+ 8 more)
(GCA)₇=0.2350 (1177/5008, 1000G)
(GCA)₇=0.1879 (842/4480, Estonian)
(GCA)₇=0.1406 (542/3854, ALSPAC)
(GCA)₇=0.1413 (524/3708, TWINSUK)
(GCA)₇=0.136 (136/998, GoNL)
(GCA)₇=0.152 (91/600, NorthernSweden)
(GCA)₇=0.392 (83/212, Vietnamese)
(GCA)₇=0.17 (7/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: CUX1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	6968	GCAGCAGCAGCAGCAGCAGCA=0.2153	GCAGCAGCA=0.0000, GCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCAGCA=0.7847, GCAGCAGCAGCAGCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0000	0.074914	0.644374	0.280712	32
European	Sub	6702	GCAGCAGCAGCAGCAGCAGCA=0.1987	GCAGCAGCA=0.0000, GCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCAGCA=0.8013, GCAGCAGCAGCAGCAGCAGCAGCA=0.0000, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0000	0.055804	0.658311	0.285885	19
African	Sub	124	GCAGCAGCAGCAGCAGCAGCA=0.468	GCAGCAGCA=0.000, GCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCAGCA=0.532, GCAGCAGCAGCAGCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.000	0.370968	0.435484	0.193548	13
African Others	Sub	8	GCAGCAGCAGCAGCAGCAGCA=0.4	GCAGCAGCA=0.0, GCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCA=0.6, GCAGCAGCAGCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0	0.25	0.5	0.25	1
African American	Sub	116	GCAGCAGCAGCAGCAGCAGCA=0.474	GCAGCAGCA=0.000, GCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCAGCA=0.526, GCAGCAGCAGCAGCAGCAGCAGCA=0.000, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.000	0.37931	0.431034	0.189655	12
Asian	Sub	16	GCAGCAGCAGCAGCAGCAGCA=0.88	GCAGCAGCA=0.00, GCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCA=0.12, GCAGCAGCAGCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.00	0.75	0.0	0.25	0
East Asian	Sub	6	GCAGCAGCAGCAGCAGCAGCA=0.8	GCAGCAGCA=0.0, GCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCA=0.2, GCAGCAGCAGCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0	0.666667	0.0	0.333333	0
Other Asian	Sub	10	GCAGCAGCAGCAGCAGCAGCA=0.9	GCAGCAGCA=0.0, GCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCA=0.1, GCAGCAGCAGCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0	0.8	0.0	0.2	0
Latin American 1	Sub	6	GCAGCAGCAGCAGCAGCAGCA=1.0	GCAGCAGCA=0.0, GCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCAGCAGCA=0.0, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.0	1.0	0.0	0.0	N/A
Latin American 2	Sub	38	GCAGCAGCAGCAGCAGCAGCA=1.00	GCAGCAGCA=0.00, GCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.00	1.0	0.0	0.0	N/A
South Asian	Sub	22	GCAGCAGCAGCAGCAGCAGCA=0.86	GCAGCAGCA=0.00, GCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCA=0.14, GCAGCAGCAGCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.00	0.818182	0.090909	0.090909	3
Other	Sub	60	GCAGCAGCAGCAGCAGCAGCA=0.55	GCAGCAGCA=0.00, GCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCA=0.45, GCAGCAGCAGCAGCAGCAGCAGCA=0.00, GCAGCAGCAGCAGCAGCAGCAGCAGCA=0.00	0.466667	0.366667	0.166667	8

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(GCA)₇=0.172368	delGCA=0.827632
8.3KJPN	JAPANESE	Study-wide	16758	(GCA)₇=0.39748	delGCA=0.60252
Allele Frequency Aggregator	Total	Global	6968	(GCA)₇=0.2153	del(GCA)₄=0.0000, del(GCA)₃=0.0000, del(GCA)₂=0.0000, delGCA=0.7847, dupGCA=0.0000, dup(GCA)₂=0.0000
Allele Frequency Aggregator	European	Sub	6702	(GCA)₇=0.1987	del(GCA)₄=0.0000, del(GCA)₃=0.0000, del(GCA)₂=0.0000, delGCA=0.8013, dupGCA=0.0000, dup(GCA)₂=0.0000
Allele Frequency Aggregator	African	Sub	124	(GCA)₇=0.468	del(GCA)₄=0.000, del(GCA)₃=0.000, del(GCA)₂=0.000, delGCA=0.532, dupGCA=0.000, dup(GCA)₂=0.000
Allele Frequency Aggregator	Other	Sub	60	(GCA)₇=0.55	del(GCA)₄=0.00, del(GCA)₃=0.00, del(GCA)₂=0.00, delGCA=0.45, dupGCA=0.00, dup(GCA)₂=0.00
Allele Frequency Aggregator	Latin American 2	Sub	38	(GCA)₇=1.00	del(GCA)₄=0.00, del(GCA)₃=0.00, del(GCA)₂=0.00, delGCA=0.00, dupGCA=0.00, dup(GCA)₂=0.00
Allele Frequency Aggregator	South Asian	Sub	22	(GCA)₇=0.86	del(GCA)₄=0.00, del(GCA)₃=0.00, del(GCA)₂=0.00, delGCA=0.14, dupGCA=0.00, dup(GCA)₂=0.00
Allele Frequency Aggregator	Asian	Sub	16	(GCA)₇=0.88	del(GCA)₄=0.00, del(GCA)₃=0.00, del(GCA)₂=0.00, delGCA=0.12, dupGCA=0.00, dup(GCA)₂=0.00
Allele Frequency Aggregator	Latin American 1	Sub	6	(GCA)₇=1.0	del(GCA)₄=0.0, del(GCA)₃=0.0, del(GCA)₂=0.0, delGCA=0.0, dupGCA=0.0, dup(GCA)₂=0.0
1000Genomes	Global	Study-wide	5008	(GCA)₇=0.2350	delGCA=0.7650
1000Genomes	African	Sub	1322	(GCA)₇=0.1271	delGCA=0.8729
1000Genomes	East Asian	Sub	1008	(GCA)₇=0.3849	delGCA=0.6151
1000Genomes	Europe	Sub	1006	(GCA)₇=0.1680	delGCA=0.8320
1000Genomes	South Asian	Sub	978	(GCA)₇=0.262	delGCA=0.738
1000Genomes	American	Sub	694	(GCA)₇=0.282	delGCA=0.718
Genetic variation in the Estonian population	Estonian	Study-wide	4480	(GCA)₇=0.1879	delGCA=0.8121
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	(GCA)₇=0.1406	delGCA=0.8594
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	(GCA)₇=0.1413	delGCA=0.8587
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	(GCA)₇=0.136	delGCA=0.864
Northern Sweden	ACPOP	Study-wide	600	(GCA)₇=0.152	delGCA=0.848
A Vietnamese Genetic Variation Database	Global	Study-wide	212	(GCA)₇=0.392	delGCA=0.608
The Danish reference pan genome	Danish	Study-wide	40	(GCA)₇=0.17	delGCA=0.82

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[3]
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[4]
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[5]
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[6]
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[8]
GRCh38.p14 chr 7	NC_000007.14:g.101958371GCA[9]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[3]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[4]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[5]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[6]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[8]
GRCh37.p13 chr 7	NC_000007.13:g.101601651GCA[9]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[3]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[4]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[5]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[6]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[8]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468GCA[9]

Gene: CUX1, cut like homeobox 1 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CUX1 transcript variant 4	NM_001202543.2:c.174+4214… NM_001202543.2:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant 5	NM_001202544.3:c.174+4214… NM_001202544.3:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant 6	NM_001202545.3:c.174+4214… NM_001202545.3:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant 7	NM_001202546.3:c.64-69727… NM_001202546.3:c.64-69727GCA[3]	N/A	Intron Variant
CUX1 transcript variant 2	NM_001913.5:c.174+42146GC… NM_001913.5:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant 3	NM_181500.4:c.174+42146GC… NM_181500.4:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant 1	NM_181552.4:c.141+42146GC… NM_181552.4:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X1	XM_005250150.4:c.141+4214… XM_005250150.4:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X18	XM_005250154.4:c.141+4214… XM_005250154.4:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X4	XM_006715854.3:c.141+4214… XM_006715854.3:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X13	XM_011515825.3:c.174+4214… XM_011515825.3:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X12	XM_017011760.3:c.174+4214… XM_017011760.3:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X8	XM_024446668.2:c.141+4214… XM_024446668.2:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X2	XM_047419906.1:c.141+4214… XM_047419906.1:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X3	XM_047419907.1:c.141+4214… XM_047419907.1:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X5	XM_047419908.1:c.174+4214… XM_047419908.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X6	XM_047419909.1:c.174+4214… XM_047419909.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X7	XM_047419910.1:c.174+4214… XM_047419910.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X9	XM_047419911.1:c.141+4214… XM_047419911.1:c.141+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X10	XM_047419912.1:c.174+4214… XM_047419912.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X11	XM_047419913.1:c.174+4214… XM_047419913.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X14	XM_047419914.1:c.174+4214… XM_047419914.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X15	XM_047419915.1:c.174+4214… XM_047419915.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X16	XM_047419916.1:c.174+4214… XM_047419916.1:c.174+42146GCA[3]	N/A	Intron Variant
CUX1 transcript variant X17	XM_047419917.1:c.174+4214… XM_047419917.1:c.174+42146GCA[3]	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(GCA)₇=	del(GCA)₄	del(GCA)₃	del(GCA)₂	delGCA	dupGCA	dup(GCA)₂
GRCh38.p14 chr 7	NC_000007.14:g.101958371_101958391=	NC_000007.14:g.101958371GCA[3]	NC_000007.14:g.101958371GCA[4]	NC_000007.14:g.101958371GCA[5]	NC_000007.14:g.101958371GCA[6]	NC_000007.14:g.101958371GCA[8]	NC_000007.14:g.101958371GCA[9]
GRCh37.p13 chr 7	NC_000007.13:g.101601651_101601671=	NC_000007.13:g.101601651GCA[3]	NC_000007.13:g.101601651GCA[4]	NC_000007.13:g.101601651GCA[5]	NC_000007.13:g.101601651GCA[6]	NC_000007.13:g.101601651GCA[8]	NC_000007.13:g.101601651GCA[9]
CUX1 RefSeqGene (LRG_1123)	NG_029476.2:g.147468_147488=	NG_029476.2:g.147468GCA[3]	NG_029476.2:g.147468GCA[4]	NG_029476.2:g.147468GCA[5]	NG_029476.2:g.147468GCA[6]	NG_029476.2:g.147468GCA[8]	NG_029476.2:g.147468GCA[9]
CUX1 transcript variant 4	NM_001202543.1:c.174+42146=	NM_001202543.1:c.174+42146GCA[3]	NM_001202543.1:c.174+42146GCA[4]	NM_001202543.1:c.174+42146GCA[5]	NM_001202543.1:c.174+42146GCA[6]	NM_001202543.1:c.174+42146GCA[8]	NM_001202543.1:c.174+42146GCA[9]
CUX1 transcript variant 4	NM_001202543.2:c.174+42146=	NM_001202543.2:c.174+42146GCA[3]	NM_001202543.2:c.174+42146GCA[4]	NM_001202543.2:c.174+42146GCA[5]	NM_001202543.2:c.174+42146GCA[6]	NM_001202543.2:c.174+42146GCA[8]	NM_001202543.2:c.174+42146GCA[9]
CUX1 transcript variant 5	NM_001202544.1:c.174+42146=	NM_001202544.1:c.174+42146GCA[3]	NM_001202544.1:c.174+42146GCA[4]	NM_001202544.1:c.174+42146GCA[5]	NM_001202544.1:c.174+42146GCA[6]	NM_001202544.1:c.174+42146GCA[8]	NM_001202544.1:c.174+42146GCA[9]
CUX1 transcript variant 5	NM_001202544.3:c.174+42146=	NM_001202544.3:c.174+42146GCA[3]	NM_001202544.3:c.174+42146GCA[4]	NM_001202544.3:c.174+42146GCA[5]	NM_001202544.3:c.174+42146GCA[6]	NM_001202544.3:c.174+42146GCA[8]	NM_001202544.3:c.174+42146GCA[9]
CUX1 transcript variant 6	NM_001202545.1:c.174+42146=	NM_001202545.1:c.174+42146GCA[3]	NM_001202545.1:c.174+42146GCA[4]	NM_001202545.1:c.174+42146GCA[5]	NM_001202545.1:c.174+42146GCA[6]	NM_001202545.1:c.174+42146GCA[8]	NM_001202545.1:c.174+42146GCA[9]
CUX1 transcript variant 6	NM_001202545.3:c.174+42146=	NM_001202545.3:c.174+42146GCA[3]	NM_001202545.3:c.174+42146GCA[4]	NM_001202545.3:c.174+42146GCA[5]	NM_001202545.3:c.174+42146GCA[6]	NM_001202545.3:c.174+42146GCA[8]	NM_001202545.3:c.174+42146GCA[9]
CUX1 transcript variant 7	NM_001202546.1:c.64-69727=	NM_001202546.1:c.64-69727GCA[3]	NM_001202546.1:c.64-69727GCA[4]	NM_001202546.1:c.64-69727GCA[5]	NM_001202546.1:c.64-69727GCA[6]	NM_001202546.1:c.64-69727GCA[8]	NM_001202546.1:c.64-69727GCA[9]
CUX1 transcript variant 7	NM_001202546.3:c.64-69727=	NM_001202546.3:c.64-69727GCA[3]	NM_001202546.3:c.64-69727GCA[4]	NM_001202546.3:c.64-69727GCA[5]	NM_001202546.3:c.64-69727GCA[6]	NM_001202546.3:c.64-69727GCA[8]	NM_001202546.3:c.64-69727GCA[9]
CUX1 transcript variant 2	NM_001913.3:c.174+42146=	NM_001913.3:c.174+42146GCA[3]	NM_001913.3:c.174+42146GCA[4]	NM_001913.3:c.174+42146GCA[5]	NM_001913.3:c.174+42146GCA[6]	NM_001913.3:c.174+42146GCA[8]	NM_001913.3:c.174+42146GCA[9]
CUX1 transcript variant 2	NM_001913.5:c.174+42146=	NM_001913.5:c.174+42146GCA[3]	NM_001913.5:c.174+42146GCA[4]	NM_001913.5:c.174+42146GCA[5]	NM_001913.5:c.174+42146GCA[6]	NM_001913.5:c.174+42146GCA[8]	NM_001913.5:c.174+42146GCA[9]
CUX1 transcript variant 3	NM_181500.2:c.174+42146=	NM_181500.2:c.174+42146GCA[3]	NM_181500.2:c.174+42146GCA[4]	NM_181500.2:c.174+42146GCA[5]	NM_181500.2:c.174+42146GCA[6]	NM_181500.2:c.174+42146GCA[8]	NM_181500.2:c.174+42146GCA[9]
CUX1 transcript variant 3	NM_181500.4:c.174+42146=	NM_181500.4:c.174+42146GCA[3]	NM_181500.4:c.174+42146GCA[4]	NM_181500.4:c.174+42146GCA[5]	NM_181500.4:c.174+42146GCA[6]	NM_181500.4:c.174+42146GCA[8]	NM_181500.4:c.174+42146GCA[9]
CUX1 transcript variant 1	NM_181552.3:c.141+42146=	NM_181552.3:c.141+42146GCA[3]	NM_181552.3:c.141+42146GCA[4]	NM_181552.3:c.141+42146GCA[5]	NM_181552.3:c.141+42146GCA[6]	NM_181552.3:c.141+42146GCA[8]	NM_181552.3:c.141+42146GCA[9]
CUX1 transcript variant 1	NM_181552.4:c.141+42146=	NM_181552.4:c.141+42146GCA[3]	NM_181552.4:c.141+42146GCA[4]	NM_181552.4:c.141+42146GCA[5]	NM_181552.4:c.141+42146GCA[6]	NM_181552.4:c.141+42146GCA[8]	NM_181552.4:c.141+42146GCA[9]
CUX1 transcript variant X1	XM_005250150.1:c.441+42146=	XM_005250150.1:c.441+42146GCA[3]	XM_005250150.1:c.441+42146GCA[4]	XM_005250150.1:c.441+42146GCA[5]	XM_005250150.1:c.441+42146GCA[6]	XM_005250150.1:c.441+42146GCA[8]	XM_005250150.1:c.441+42146GCA[9]
CUX1 transcript variant X1	XM_005250150.4:c.141+42146=	XM_005250150.4:c.141+42146GCA[3]	XM_005250150.4:c.141+42146GCA[4]	XM_005250150.4:c.141+42146GCA[5]	XM_005250150.4:c.141+42146GCA[6]	XM_005250150.4:c.141+42146GCA[8]	XM_005250150.4:c.141+42146GCA[9]
CUX1 transcript variant X2	XM_005250151.1:c.441+42146=	XM_005250151.1:c.441+42146GCA[3]	XM_005250151.1:c.441+42146GCA[4]	XM_005250151.1:c.441+42146GCA[5]	XM_005250151.1:c.441+42146GCA[6]	XM_005250151.1:c.441+42146GCA[8]	XM_005250151.1:c.441+42146GCA[9]
CUX1 transcript variant X3	XM_005250152.1:c.441+42146=	XM_005250152.1:c.441+42146GCA[3]	XM_005250152.1:c.441+42146GCA[4]	XM_005250152.1:c.441+42146GCA[5]	XM_005250152.1:c.441+42146GCA[6]	XM_005250152.1:c.441+42146GCA[8]	XM_005250152.1:c.441+42146GCA[9]
CUX1 transcript variant X4	XM_005250153.1:c.174+42146=	XM_005250153.1:c.174+42146GCA[3]	XM_005250153.1:c.174+42146GCA[4]	XM_005250153.1:c.174+42146GCA[5]	XM_005250153.1:c.174+42146GCA[6]	XM_005250153.1:c.174+42146GCA[8]	XM_005250153.1:c.174+42146GCA[9]
CUX1 transcript variant X5	XM_005250154.1:c.441+42146=	XM_005250154.1:c.441+42146GCA[3]	XM_005250154.1:c.441+42146GCA[4]	XM_005250154.1:c.441+42146GCA[5]	XM_005250154.1:c.441+42146GCA[6]	XM_005250154.1:c.441+42146GCA[8]	XM_005250154.1:c.441+42146GCA[9]
CUX1 transcript variant X18	XM_005250154.4:c.141+42146=	XM_005250154.4:c.141+42146GCA[3]	XM_005250154.4:c.141+42146GCA[4]	XM_005250154.4:c.141+42146GCA[5]	XM_005250154.4:c.141+42146GCA[6]	XM_005250154.4:c.141+42146GCA[8]	XM_005250154.4:c.141+42146GCA[9]
CUX1 transcript variant X6	XM_005250155.1:c.216+42146=	XM_005250155.1:c.216+42146GCA[3]	XM_005250155.1:c.216+42146GCA[4]	XM_005250155.1:c.216+42146GCA[5]	XM_005250155.1:c.216+42146GCA[6]	XM_005250155.1:c.216+42146GCA[8]	XM_005250155.1:c.216+42146GCA[9]
CUX1 transcript variant X4	XM_006715854.3:c.141+42146=	XM_006715854.3:c.141+42146GCA[3]	XM_006715854.3:c.141+42146GCA[4]	XM_006715854.3:c.141+42146GCA[5]	XM_006715854.3:c.141+42146GCA[6]	XM_006715854.3:c.141+42146GCA[8]	XM_006715854.3:c.141+42146GCA[9]
CUX1 transcript variant X13	XM_011515825.3:c.174+42146=	XM_011515825.3:c.174+42146GCA[3]	XM_011515825.3:c.174+42146GCA[4]	XM_011515825.3:c.174+42146GCA[5]	XM_011515825.3:c.174+42146GCA[6]	XM_011515825.3:c.174+42146GCA[8]	XM_011515825.3:c.174+42146GCA[9]
CUX1 transcript variant X12	XM_017011760.3:c.174+42146=	XM_017011760.3:c.174+42146GCA[3]	XM_017011760.3:c.174+42146GCA[4]	XM_017011760.3:c.174+42146GCA[5]	XM_017011760.3:c.174+42146GCA[6]	XM_017011760.3:c.174+42146GCA[8]	XM_017011760.3:c.174+42146GCA[9]
CUX1 transcript variant X8	XM_024446668.2:c.141+42146=	XM_024446668.2:c.141+42146GCA[3]	XM_024446668.2:c.141+42146GCA[4]	XM_024446668.2:c.141+42146GCA[5]	XM_024446668.2:c.141+42146GCA[6]	XM_024446668.2:c.141+42146GCA[8]	XM_024446668.2:c.141+42146GCA[9]
CUX1 transcript variant X2	XM_047419906.1:c.141+42146=	XM_047419906.1:c.141+42146GCA[3]	XM_047419906.1:c.141+42146GCA[4]	XM_047419906.1:c.141+42146GCA[5]	XM_047419906.1:c.141+42146GCA[6]	XM_047419906.1:c.141+42146GCA[8]	XM_047419906.1:c.141+42146GCA[9]
CUX1 transcript variant X3	XM_047419907.1:c.141+42146=	XM_047419907.1:c.141+42146GCA[3]	XM_047419907.1:c.141+42146GCA[4]	XM_047419907.1:c.141+42146GCA[5]	XM_047419907.1:c.141+42146GCA[6]	XM_047419907.1:c.141+42146GCA[8]	XM_047419907.1:c.141+42146GCA[9]
CUX1 transcript variant X5	XM_047419908.1:c.174+42146=	XM_047419908.1:c.174+42146GCA[3]	XM_047419908.1:c.174+42146GCA[4]	XM_047419908.1:c.174+42146GCA[5]	XM_047419908.1:c.174+42146GCA[6]	XM_047419908.1:c.174+42146GCA[8]	XM_047419908.1:c.174+42146GCA[9]
CUX1 transcript variant X6	XM_047419909.1:c.174+42146=	XM_047419909.1:c.174+42146GCA[3]	XM_047419909.1:c.174+42146GCA[4]	XM_047419909.1:c.174+42146GCA[5]	XM_047419909.1:c.174+42146GCA[6]	XM_047419909.1:c.174+42146GCA[8]	XM_047419909.1:c.174+42146GCA[9]
CUX1 transcript variant X7	XM_047419910.1:c.174+42146=	XM_047419910.1:c.174+42146GCA[3]	XM_047419910.1:c.174+42146GCA[4]	XM_047419910.1:c.174+42146GCA[5]	XM_047419910.1:c.174+42146GCA[6]	XM_047419910.1:c.174+42146GCA[8]	XM_047419910.1:c.174+42146GCA[9]
CUX1 transcript variant X9	XM_047419911.1:c.141+42146=	XM_047419911.1:c.141+42146GCA[3]	XM_047419911.1:c.141+42146GCA[4]	XM_047419911.1:c.141+42146GCA[5]	XM_047419911.1:c.141+42146GCA[6]	XM_047419911.1:c.141+42146GCA[8]	XM_047419911.1:c.141+42146GCA[9]
CUX1 transcript variant X10	XM_047419912.1:c.174+42146=	XM_047419912.1:c.174+42146GCA[3]	XM_047419912.1:c.174+42146GCA[4]	XM_047419912.1:c.174+42146GCA[5]	XM_047419912.1:c.174+42146GCA[6]	XM_047419912.1:c.174+42146GCA[8]	XM_047419912.1:c.174+42146GCA[9]
CUX1 transcript variant X11	XM_047419913.1:c.174+42146=	XM_047419913.1:c.174+42146GCA[3]	XM_047419913.1:c.174+42146GCA[4]	XM_047419913.1:c.174+42146GCA[5]	XM_047419913.1:c.174+42146GCA[6]	XM_047419913.1:c.174+42146GCA[8]	XM_047419913.1:c.174+42146GCA[9]
CUX1 transcript variant X14	XM_047419914.1:c.174+42146=	XM_047419914.1:c.174+42146GCA[3]	XM_047419914.1:c.174+42146GCA[4]	XM_047419914.1:c.174+42146GCA[5]	XM_047419914.1:c.174+42146GCA[6]	XM_047419914.1:c.174+42146GCA[8]	XM_047419914.1:c.174+42146GCA[9]
CUX1 transcript variant X15	XM_047419915.1:c.174+42146=	XM_047419915.1:c.174+42146GCA[3]	XM_047419915.1:c.174+42146GCA[4]	XM_047419915.1:c.174+42146GCA[5]	XM_047419915.1:c.174+42146GCA[6]	XM_047419915.1:c.174+42146GCA[8]	XM_047419915.1:c.174+42146GCA[9]
CUX1 transcript variant X16	XM_047419916.1:c.174+42146=	XM_047419916.1:c.174+42146GCA[3]	XM_047419916.1:c.174+42146GCA[4]	XM_047419916.1:c.174+42146GCA[5]	XM_047419916.1:c.174+42146GCA[6]	XM_047419916.1:c.174+42146GCA[8]	XM_047419916.1:c.174+42146GCA[9]
CUX1 transcript variant X17	XM_047419917.1:c.174+42146=	XM_047419917.1:c.174+42146GCA[3]	XM_047419917.1:c.174+42146GCA[4]	XM_047419917.1:c.174+42146GCA[5]	XM_047419917.1:c.174+42146GCA[6]	XM_047419917.1:c.174+42146GCA[8]	XM_047419917.1:c.174+42146GCA[9]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

70 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	HGSV	ss79887177	Sep 08, 2015 (146)
2	HGSV	ss81874278	Sep 08, 2015 (146)
3	HGSV	ss81945635	Sep 08, 2015 (146)
4	HUMANGENOME_JCVI	ss95470030	Feb 04, 2009 (137)
5	BCMHGSC_JDW	ss103755344	Dec 06, 2013 (138)
6	BUSHMAN	ss193936965	Jul 04, 2010 (132)
7	BL	ss256081483	May 09, 2011 (135)
8	GMI	ss288861857	May 04, 2012 (137)
9	PJP	ss295348892	May 09, 2011 (134)
10	1000GENOMES	ss326969810	May 09, 2011 (135)
11	1000GENOMES	ss327024435	May 09, 2011 (135)
12	1000GENOMES	ss327320329	May 09, 2011 (135)
13	1000GENOMES	ss499962088	May 04, 2012 (137)
14	LUNTER	ss551767407	Apr 25, 2013 (138)
15	LUNTER	ss551972674	Apr 25, 2013 (138)
16	LUNTER	ss553310586	Apr 25, 2013 (138)
17	SSMP	ss663729800	Apr 01, 2015 (144)
18	BILGI_BIOE	ss666410115	Apr 25, 2013 (138)
19	EVA-GONL	ss984606033	Aug 21, 2014 (142)
20	1000GENOMES	ss1377456258	Aug 21, 2014 (142)
21	DDI	ss1536557753	Apr 01, 2015 (144)
22	EVA_GENOME_DK	ss1577055696	Apr 01, 2015 (144)
23	EVA_DECODE	ss1594185378	Apr 01, 2015 (144)
24	EVA_DECODE	ss1594185379	Apr 01, 2015 (144)
25	EVA_UK10K_ALSPAC	ss1705755974	Apr 01, 2015 (144)
26	EVA_UK10K_TWINSUK	ss1705756089	Apr 01, 2015 (144)
27	HAMMER_LAB	ss1805139958	Sep 08, 2015 (146)
28	JJLAB	ss2030860194	Sep 14, 2016 (149)
29	SYSTEMSBIOZJU	ss2626799916	Nov 08, 2017 (151)
30	SWEGEN	ss3001738172	Nov 08, 2017 (151)
31	MCHAISSO	ss3064267540	Nov 08, 2017 (151)
32	MCHAISSO	ss3065150775	Nov 08, 2017 (151)
33	MCHAISSO	ss3066160714	Nov 08, 2017 (151)
34	BEROUKHIMLAB	ss3644244957	Oct 12, 2018 (152)
35	BIOINF_KMB_FNS_UNIBA	ss3646047633	Oct 12, 2018 (152)
36	URBANLAB	ss3648715553	Oct 12, 2018 (152)
37	EGCUT_WGS	ss3669487052	Jul 13, 2019 (153)
38	EVA_DECODE	ss3720336108	Jul 13, 2019 (153)
39	EVA_DECODE	ss3720336109	Jul 13, 2019 (153)
40	ACPOP	ss3734916365	Jul 13, 2019 (153)
41	PACBIO	ss3785910160	Jul 13, 2019 (153)
42	PACBIO	ss3791196817	Jul 13, 2019 (153)
43	PACBIO	ss3796076877	Jul 13, 2019 (153)
44	KHV_HUMAN_GENOMES	ss3810114455	Jul 13, 2019 (153)
45	EVA	ss3830730414	Apr 26, 2020 (154)
46	EVA	ss3838863692	Apr 26, 2020 (154)
47	EVA	ss3844319096	Apr 26, 2020 (154)
48	KOGIC	ss3962232910	Apr 26, 2020 (154)
49	KOGIC	ss3962232911	Apr 26, 2020 (154)
50	KOGIC	ss3962232912	Apr 26, 2020 (154)
51	GNOMAD	ss4169697644	Apr 26, 2021 (155)
52	GNOMAD	ss4169697645	Apr 26, 2021 (155)
53	GNOMAD	ss4169697646	Apr 26, 2021 (155)
54	GNOMAD	ss4169697647	Apr 26, 2021 (155)
55	GNOMAD	ss4169697648	Apr 26, 2021 (155)
56	GNOMAD	ss4169697649	Apr 26, 2021 (155)
57	TOPMED	ss4757122793	Apr 26, 2021 (155)
58	TOMMO_GENOMICS	ss5184746498	Apr 26, 2021 (155)
59	1000G_HIGH_COVERAGE	ss5274093702	Oct 14, 2022 (156)
60	1000G_HIGH_COVERAGE	ss5274093703	Oct 14, 2022 (156)
61	HUGCELL_USP	ss5471054515	Oct 14, 2022 (156)
62	HUGCELL_USP	ss5471054516	Oct 14, 2022 (156)
63	EVA	ss5509069281	Oct 14, 2022 (156)
64	TOMMO_GENOMICS	ss5725493027	Oct 14, 2022 (156)
65	TOMMO_GENOMICS	ss5725493028	Oct 14, 2022 (156)
66	YY_MCH	ss5808940014	Oct 14, 2022 (156)
67	EVA	ss5823278999	Oct 14, 2022 (156)
68	EVA	ss5823279000	Oct 14, 2022 (156)
69	EVA	ss5856027582	Oct 14, 2022 (156)
70	EVA	ss5972802893	Oct 14, 2022 (156)
71	1000Genomes	NC_000007.13 - 101601651	Oct 12, 2018 (152)
72	The Avon Longitudinal Study of Parents and Children	NC_000007.13 - 101601651	Oct 12, 2018 (152)
73	Genetic variation in the Estonian population	NC_000007.13 - 101601651	Oct 12, 2018 (152)
74	The Danish reference pan genome	NC_000007.13 - 101601651	Apr 26, 2020 (154)
75	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
76	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
77	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
78	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
79	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
80	gnomAD - Genomes Submission ignored due to conflicting rows: Row 271140279 (NC_000007.14:101958370::GCA 1/139098) Row 271140280 (NC_000007.14:101958370::GCAGCA 3/139098) Row 271140281 (NC_000007.14:101958370:GCA: 115945/139004)...	-	Apr 26, 2021 (155)
81	Genome of the Netherlands Release 5	NC_000007.13 - 101601651	Apr 26, 2020 (154)
82	Korean Genome Project Submission ignored due to conflicting rows: Row 18610911 (NC_000007.14:101958373:GCA: 1209/1832) Row 18610912 (NC_000007.14:101958370:GCAGCA: 4/1832) Row 18610913 (NC_000007.14:101958376::GCA 3/1832)	-	Apr 26, 2020 (154)
83	Korean Genome Project Submission ignored due to conflicting rows: Row 18610911 (NC_000007.14:101958373:GCA: 1209/1832) Row 18610912 (NC_000007.14:101958370:GCAGCA: 4/1832) Row 18610913 (NC_000007.14:101958376::GCA 3/1832)	-	Apr 26, 2020 (154)
84	Korean Genome Project Submission ignored due to conflicting rows: Row 18610911 (NC_000007.14:101958373:GCA: 1209/1832) Row 18610912 (NC_000007.14:101958370:GCAGCA: 4/1832) Row 18610913 (NC_000007.14:101958376::GCA 3/1832)	-	Apr 26, 2020 (154)
85	Northern Sweden	NC_000007.13 - 101601651	Jul 13, 2019 (153)
86	8.3KJPN	NC_000007.13 - 101601651	Apr 26, 2021 (155)
87	14KJPN Submission ignored due to conflicting rows: Row 59330131 (NC_000007.14:101958370:GCA: 16853/28258) Row 59330132 (NC_000007.14:101958370:GCAGCA: 2/28258)	-	Oct 14, 2022 (156)
88	14KJPN Submission ignored due to conflicting rows: Row 59330131 (NC_000007.14:101958370:GCA: 16853/28258) Row 59330132 (NC_000007.14:101958370:GCAGCA: 2/28258)	-	Oct 14, 2022 (156)
89	TopMed	NC_000007.14 - 101958371	Apr 26, 2021 (155)
90	UK 10K study - Twins	NC_000007.13 - 101601651	Oct 12, 2018 (152)
91	A Vietnamese Genetic Variation Database	NC_000007.13 - 101601651	Jul 13, 2019 (153)
92	ALFA	NC_000007.14 - 101958371	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs10589487	May 11, 2012 (137)
rs34483674	May 23, 2006 (127)
rs57560007	May 23, 2008 (130)
rs144797272	Sep 17, 2011 (135)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4169697649	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCA	(self)
ss4169697648	NC_000007.14:101958370:GCAGCAGCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCA	(self)
ss5823279000	NC_000007.13:101601650:GCAGCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCA
ss3720336109, ss3962232911, ss4169697647, ss5274093703, ss5471054516, ss5725493028	NC_000007.14:101958370:GCAGCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCA	(self)
ss79887177, ss81874278, ss81945635	NC_000007.11:101195103:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss256081483, ss288861857, ss326969810, ss327024435, ss327320329, ss551767407, ss551972674, ss553310586, ss1594185378	NC_000007.12:101388370:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss1594185379	NC_000007.12:101388371:CAG:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss295348892	NC_000007.12:101388377:CAG:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
38419012, 21374678, 15225300, 1172297, 9541559, 8201230, 42715805, 21374678, 4764952, ss499962088, ss663729800, ss666410115, ss984606033, ss1377456258, ss1536557753, ss1577055696, ss1705755974, ss1705756089, ss1805139958, ss2030860194, ss2626799916, ss3001738172, ss3644244957, ss3669487052, ss3734916365, ss3785910160, ss3791196817, ss3796076877, ss3830730414, ss3838863692, ss5184746498, ss5509069281, ss5823278999, ss5972802893	NC_000007.13:101601650:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
594500352, ss3064267540, ss3065150775, ss3066160714, ss3646047633, ss3648715553, ss3810114455, ss3844319096, ss4169697646, ss4757122793, ss5274093702, ss5471054515, ss5725493027, ss5808940014, ss5856027582	NC_000007.14:101958370:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss3720336108, ss3962232910	NC_000007.14:101958373:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss95470030, ss103755344	NT_007933.15:39634511:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss193936965	NT_007933.16:39451591:GCA:	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCA	(self)
ss4169697644	NC_000007.14:101958370::GCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCA	(self)
ss3962232912	NC_000007.14:101958376::GCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCA	(self)
ss4169697645	NC_000007.14:101958370::GCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCAGCA	(self)
7277590894	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCAGCA	NC_000007.14:101958370:GCAGCAGCAGC… NC_000007.14:101958370:GCAGCAGCAGCAGCAGCAGCA:GCAGCAGCAGCAGCAGCAGCAGCAGCA	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10564479

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10564479