Name: rs1038477874
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1038477874

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:246903653-246903662 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delCCC / delCC / delC / dupC / dup…
delCCC / delCC / delC / dupC / dupCC / dupCCC / dup(C)₆ / dup(C)₁₀ / ins(C)₁₂
Variation Type: Indel Insertion and Deletion
Frequency: delCC=0.00000 (0/10854, ALFA)
delC=0.00000 (0/10854, ALFA)
dupC=0.00000 (0/10854, ALFA) (+ 3 more)
dupCC=0.00000 (0/10854, ALFA)
dupCCC=0.00000 (0/10854, ALFA)
delC=0.0183 (75/4096, Estonian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: AHCTF1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HWEP
Total	Global	10854	CCCCCCCCCC=1.00000	CCCCCCCC=0.00000, CCCCCCCCC=0.00000, CCCCCCCCCCC=0.00000, CCCCCCCCCCCC=0.00000, CCCCCCCCCCCCC=0.00000	1.0	N/A
European	Sub	6934	CCCCCCCCCC=1.0000	CCCCCCCC=0.0000, CCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000	1.0	N/A
African	Sub	2590	CCCCCCCCCC=1.0000	CCCCCCCC=0.0000, CCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000	1.0	N/A
African Others	Sub	100	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	N/A
African American	Sub	2490	CCCCCCCCCC=1.0000	CCCCCCCC=0.0000, CCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000, CCCCCCCCCCCCC=0.0000	1.0	N/A
Asian	Sub	106	CCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	1.0	N/A
East Asian	Sub	82	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	N/A
Other Asian	Sub	24	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	N/A
Latin American 1	Sub	134	CCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	1.0	N/A
Latin American 2	Sub	586	CCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	1.0	N/A
South Asian	Sub	92	CCCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00, CCCCCCCCCCCCC=0.00	1.0	N/A
Other	Sub	412	CCCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000, CCCCCCCCCCCCC=0.000	1.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	10854	(C)₁₀=1.00000	delCC=0.00000, delC=0.00000, dupC=0.00000, dupCC=0.00000, dupCCC=0.00000
Allele Frequency Aggregator	European	Sub	6934	(C)₁₀=1.0000	delCC=0.0000, delC=0.0000, dupC=0.0000, dupCC=0.0000, dupCCC=0.0000
Allele Frequency Aggregator	African	Sub	2590	(C)₁₀=1.0000	delCC=0.0000, delC=0.0000, dupC=0.0000, dupCC=0.0000, dupCCC=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	586	(C)₁₀=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Other	Sub	412	(C)₁₀=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Latin American 1	Sub	134	(C)₁₀=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Asian	Sub	106	(C)₁₀=1.000	delCC=0.000, delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	South Asian	Sub	92	(C)₁₀=1.00	delCC=0.00, delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Genetic variation in the Estonian population	Estonian	Study-wide	4096	(C)₁₀=0.9817	delC=0.0183

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.246903660_246903662del
GRCh38.p14 chr 1	NC_000001.11:g.246903661_246903662del
GRCh38.p14 chr 1	NC_000001.11:g.246903662del
GRCh38.p14 chr 1	NC_000001.11:g.246903662dup
GRCh38.p14 chr 1	NC_000001.11:g.246903661_246903662dup
GRCh38.p14 chr 1	NC_000001.11:g.246903660_246903662dup
GRCh38.p14 chr 1	NC_000001.11:g.246903657_246903662dup
GRCh38.p14 chr 1	NC_000001.11:g.246903653_246903662dup
GRCh38.p14 chr 1	NC_000001.11:g.246903662_246903663insCCCCCCCCCCCC
GRCh37.p13 chr 1	NC_000001.10:g.247066962_247066964del
GRCh37.p13 chr 1	NC_000001.10:g.247066963_247066964del
GRCh37.p13 chr 1	NC_000001.10:g.247066964del
GRCh37.p13 chr 1	NC_000001.10:g.247066964dup
GRCh37.p13 chr 1	NC_000001.10:g.247066963_247066964dup
GRCh37.p13 chr 1	NC_000001.10:g.247066962_247066964dup
GRCh37.p13 chr 1	NC_000001.10:g.247066959_247066964dup
GRCh37.p13 chr 1	NC_000001.10:g.247066955_247066964dup
GRCh37.p13 chr 1	NC_000001.10:g.247066964_247066965insCCCCCCCCCCCC

Gene: AHCTF1, AT-hook containing transcription factor 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
AHCTF1 transcript variant 2	NM_001323342.2:c.966+294_… NM_001323342.2:c.966+294_966+296del	N/A	Intron Variant
AHCTF1 transcript variant 3	NM_001323343.2:c.966+294_… NM_001323343.2:c.966+294_966+296del	N/A	Intron Variant
AHCTF1 transcript variant 1	NM_015446.5:c.993+294_993… NM_015446.5:c.993+294_993+296del	N/A	Intron Variant
AHCTF1 transcript variant 4	NR_136586.2:n.	N/A	Intron Variant
AHCTF1 transcript variant X1	XM_006711758.1:c.1071+294… XM_006711758.1:c.1071+294_1071+296del	N/A	Intron Variant
AHCTF1 transcript variant X1	XM_011544156.3:c.1071+294… XM_011544156.3:c.1071+294_1071+296del	N/A	Intron Variant
AHCTF1 transcript variant X2	XM_011544157.4:c.1071+294… XM_011544157.4:c.1071+294_1071+296del	N/A	Intron Variant
AHCTF1 transcript variant X3	XM_047417231.1:c.1071+294… XM_047417231.1:c.1071+294_1071+296del	N/A	Intron Variant
AHCTF1 transcript variant X4	XM_047417232.1:c.1071+294… XM_047417232.1:c.1071+294_1071+296del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₁₀=	delCCC	delCC	delC	dupC	dupCC	dupCCC	dup(C)₆	dup(C)₁₀	ins(C)₁₂
GRCh38.p14 chr 1	NC_000001.11:g.246903653_246903662=	NC_000001.11:g.246903660_246903662del	NC_000001.11:g.246903661_246903662del	NC_000001.11:g.246903662del	NC_000001.11:g.246903662dup	NC_000001.11:g.246903661_246903662dup	NC_000001.11:g.246903660_246903662dup	NC_000001.11:g.246903657_246903662dup	NC_000001.11:g.246903653_246903662dup	NC_000001.11:g.246903662_246903663insCCCCCCCCCCCC
GRCh37.p13 chr 1	NC_000001.10:g.247066955_247066964=	NC_000001.10:g.247066962_247066964del	NC_000001.10:g.247066963_247066964del	NC_000001.10:g.247066964del	NC_000001.10:g.247066964dup	NC_000001.10:g.247066963_247066964dup	NC_000001.10:g.247066962_247066964dup	NC_000001.10:g.247066959_247066964dup	NC_000001.10:g.247066955_247066964dup	NC_000001.10:g.247066964_247066965insCCCCCCCCCCCC
AHCTF1 transcript variant 2	NM_001323342.2:c.966+296=	NM_001323342.2:c.966+294_966+296del	NM_001323342.2:c.966+295_966+296del	NM_001323342.2:c.966+296del	NM_001323342.2:c.966+296dup	NM_001323342.2:c.966+295_966+296dup	NM_001323342.2:c.966+294_966+296dup	NM_001323342.2:c.966+291_966+296dup	NM_001323342.2:c.966+287_966+296dup	NM_001323342.2:c.966+296_966+297insGGGGGGGGGGGG
AHCTF1 transcript variant 3	NM_001323343.2:c.966+296=	NM_001323343.2:c.966+294_966+296del	NM_001323343.2:c.966+295_966+296del	NM_001323343.2:c.966+296del	NM_001323343.2:c.966+296dup	NM_001323343.2:c.966+295_966+296dup	NM_001323343.2:c.966+294_966+296dup	NM_001323343.2:c.966+291_966+296dup	NM_001323343.2:c.966+287_966+296dup	NM_001323343.2:c.966+296_966+297insGGGGGGGGGGGG
AHCTF1 transcript variant 1	NM_015446.4:c.993+296=	NM_015446.4:c.993+294_993+296del	NM_015446.4:c.993+295_993+296del	NM_015446.4:c.993+296del	NM_015446.4:c.993+296dup	NM_015446.4:c.993+295_993+296dup	NM_015446.4:c.993+294_993+296dup	NM_015446.4:c.993+291_993+296dup	NM_015446.4:c.993+287_993+296dup	NM_015446.4:c.993+296_993+297insGGGGGGGGGGGG
AHCTF1 transcript variant 1	NM_015446.5:c.993+296=	NM_015446.5:c.993+294_993+296del	NM_015446.5:c.993+295_993+296del	NM_015446.5:c.993+296del	NM_015446.5:c.993+296dup	NM_015446.5:c.993+295_993+296dup	NM_015446.5:c.993+294_993+296dup	NM_015446.5:c.993+291_993+296dup	NM_015446.5:c.993+287_993+296dup	NM_015446.5:c.993+296_993+297insGGGGGGGGGGGG
AHCTF1 transcript variant X1	XM_006711758.1:c.1071+296=	XM_006711758.1:c.1071+294_1071+296del	XM_006711758.1:c.1071+295_1071+296del	XM_006711758.1:c.1071+296del	XM_006711758.1:c.1071+296dup	XM_006711758.1:c.1071+295_1071+296dup	XM_006711758.1:c.1071+294_1071+296dup	XM_006711758.1:c.1071+291_1071+296dup	XM_006711758.1:c.1071+287_1071+296dup	XM_006711758.1:c.1071+296_1071+297insGGGGGGGGGGGG
AHCTF1 transcript variant X1	XM_011544156.3:c.1071+296=	XM_011544156.3:c.1071+294_1071+296del	XM_011544156.3:c.1071+295_1071+296del	XM_011544156.3:c.1071+296del	XM_011544156.3:c.1071+296dup	XM_011544156.3:c.1071+295_1071+296dup	XM_011544156.3:c.1071+294_1071+296dup	XM_011544156.3:c.1071+291_1071+296dup	XM_011544156.3:c.1071+287_1071+296dup	XM_011544156.3:c.1071+296_1071+297insGGGGGGGGGGGG
AHCTF1 transcript variant X2	XM_011544157.4:c.1071+296=	XM_011544157.4:c.1071+294_1071+296del	XM_011544157.4:c.1071+295_1071+296del	XM_011544157.4:c.1071+296del	XM_011544157.4:c.1071+296dup	XM_011544157.4:c.1071+295_1071+296dup	XM_011544157.4:c.1071+294_1071+296dup	XM_011544157.4:c.1071+291_1071+296dup	XM_011544157.4:c.1071+287_1071+296dup	XM_011544157.4:c.1071+296_1071+297insGGGGGGGGGGGG
AHCTF1 transcript variant X3	XM_047417231.1:c.1071+296=	XM_047417231.1:c.1071+294_1071+296del	XM_047417231.1:c.1071+295_1071+296del	XM_047417231.1:c.1071+296del	XM_047417231.1:c.1071+296dup	XM_047417231.1:c.1071+295_1071+296dup	XM_047417231.1:c.1071+294_1071+296dup	XM_047417231.1:c.1071+291_1071+296dup	XM_047417231.1:c.1071+287_1071+296dup	XM_047417231.1:c.1071+296_1071+297insGGGGGGGGGGGG
AHCTF1 transcript variant X4	XM_047417232.1:c.1071+296=	XM_047417232.1:c.1071+294_1071+296del	XM_047417232.1:c.1071+295_1071+296del	XM_047417232.1:c.1071+296del	XM_047417232.1:c.1071+296dup	XM_047417232.1:c.1071+295_1071+296dup	XM_047417232.1:c.1071+294_1071+296dup	XM_047417232.1:c.1071+291_1071+296dup	XM_047417232.1:c.1071+287_1071+296dup	XM_047417232.1:c.1071+296_1071+297insGGGGGGGGGGGG

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

31 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SWEGEN	ss2988812239	Nov 08, 2017 (151)
2	MCHAISSO	ss3064454678	Jan 10, 2018 (151)
3	EGCUT_WGS	ss3656768273	Jul 12, 2019 (153)
4	EVA_DECODE	ss3689064025	Jul 12, 2019 (153)
5	EVA_DECODE	ss3689064026	Jul 12, 2019 (153)
6	EVA_DECODE	ss3689064027	Jul 12, 2019 (153)
7	EVA_DECODE	ss3689064028	Jul 12, 2019 (153)
8	ACPOP	ss3728060828	Jul 12, 2019 (153)
9	ACPOP	ss3728060829	Jul 12, 2019 (153)
10	EVA	ss3826763334	Apr 25, 2020 (154)
11	KOGIC	ss3946917582	Apr 25, 2020 (154)
12	KOGIC	ss3946917583	Apr 25, 2020 (154)
13	GNOMAD	ss4014957574	Apr 25, 2021 (155)
14	GNOMAD	ss4014957575	Apr 25, 2021 (155)
15	GNOMAD	ss4014957576	Apr 25, 2021 (155)
16	GNOMAD	ss4014957577	Apr 25, 2021 (155)
17	GNOMAD	ss4014957578	Apr 25, 2021 (155)
18	GNOMAD	ss4014957579	Apr 25, 2021 (155)
19	GNOMAD	ss4014957580	Apr 25, 2021 (155)
20	TOMMO_GENOMICS	ss5149423046	Apr 25, 2021 (155)
21	TOMMO_GENOMICS	ss5149423047	Apr 25, 2021 (155)
22	1000G_HIGH_COVERAGE	ss5246558733	Oct 12, 2022 (156)
23	1000G_HIGH_COVERAGE	ss5246558734	Oct 12, 2022 (156)
24	1000G_HIGH_COVERAGE	ss5246558735	Oct 12, 2022 (156)
25	HUGCELL_USP	ss5446917786	Oct 12, 2022 (156)
26	HUGCELL_USP	ss5446917787	Oct 12, 2022 (156)
27	SANFORD_IMAGENETICS	ss5627886381	Oct 12, 2022 (156)
28	TOMMO_GENOMICS	ss5677470000	Oct 12, 2022 (156)
29	TOMMO_GENOMICS	ss5677470001	Oct 12, 2022 (156)
30	YY_MCH	ss5801837244	Oct 12, 2022 (156)
31	EVA	ss5912837188	Oct 12, 2022 (156)
32	Genetic variation in the Estonian population	NC_000001.10 - 247066955	Oct 11, 2018 (152)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
39	gnomAD - Genomes Submission ignored due to conflicting rows: Row 45719725 (NC_000001.11:246903652::C 1725/80870) Row 45719726 (NC_000001.11:246903652::CC 489/80810) Row 45719727 (NC_000001.11:246903652::CCC 6/80952)...	-	Apr 25, 2021 (155)
40	Korean Genome Project Submission ignored due to conflicting rows: Row 3295583 (NC_000001.11:246903652:C: 50/1798) Row 3295584 (NC_000001.11:246903653::C 57/1798)	-	Apr 25, 2020 (154)
41	Korean Genome Project Submission ignored due to conflicting rows: Row 3295583 (NC_000001.11:246903652:C: 50/1798) Row 3295584 (NC_000001.11:246903653::C 57/1798)	-	Apr 25, 2020 (154)
42	Northern Sweden Submission ignored due to conflicting rows: Row 1345693 (NC_000001.10:247066954::C 12/582) Row 1345694 (NC_000001.10:247066954:C: 10/582)	-	Jul 12, 2019 (153)
43	Northern Sweden Submission ignored due to conflicting rows: Row 1345693 (NC_000001.10:247066954::C 12/582) Row 1345694 (NC_000001.10:247066954:C: 10/582)	-	Jul 12, 2019 (153)
44	8.3KJPN Submission ignored due to conflicting rows: Row 7392353 (NC_000001.10:247066954:C: 28/15134) Row 7392354 (NC_000001.10:247066954::C 301/15134)	-	Apr 25, 2021 (155)
45	8.3KJPN Submission ignored due to conflicting rows: Row 7392353 (NC_000001.10:247066954:C: 28/15134) Row 7392354 (NC_000001.10:247066954::C 301/15134)	-	Apr 25, 2021 (155)
46	14KJPN Submission ignored due to conflicting rows: Row 11307104 (NC_000001.11:246903652::C 525/28232) Row 11307105 (NC_000001.11:246903652:C: 33/28232)	-	Oct 12, 2022 (156)
47	14KJPN Submission ignored due to conflicting rows: Row 11307104 (NC_000001.11:246903652::C 525/28232) Row 11307105 (NC_000001.11:246903652:C: 33/28232)	-	Oct 12, 2022 (156)
48	ALFA	NC_000001.11 - 246903653	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5912837188	NC_000001.11:246903652:CCC:	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCC
ss3689064028, ss4014957580	NC_000001.11:246903652:CC:	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCC	(self)
11835143490	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCC	(self)
2506521, ss2988812239, ss3656768273, ss3728060829, ss3826763334, ss5149423046, ss5627886381	NC_000001.10:247066954:C:	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCC	(self)
ss3946917582, ss4014957579, ss5246558735, ss5446917786, ss5677470001, ss5801837244	NC_000001.11:246903652:C:	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCC	(self)
11835143490	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCC	(self)
ss3689064027	NC_000001.11:246903653:C:	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCC	(self)
ss3728060828, ss5149423047	NC_000001.10:247066954::C	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss4014957574, ss5246558733, ss5446917787, ss5677470000	NC_000001.11:246903652::C	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	(self)
11835143490	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss3946917583	NC_000001.11:246903653::C	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss3689064026	NC_000001.11:246903654::C	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCC	(self)
ss4014957575, ss5246558734	NC_000001.11:246903652::CC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCC	(self)
11835143490	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCC	(self)
ss3689064025	NC_000001.11:246903654::CC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCC	(self)
ss4014957576	NC_000001.11:246903652::CCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCC	(self)
11835143490	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCC	(self)
ss3064454678	NC_000001.11:246903652::CCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCCCCC	(self)
ss4014957577	NC_000001.11:246903652::CCCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCC	(self)
ss4014957578	NC_000001.11:246903652::CCCCCCCCCC… NC_000001.11:246903652::CCCCCCCCCCCC	NC_000001.11:246903652:CCCCCCCCCC:… NC_000001.11:246903652:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1038477874

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1038477874