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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1005241118

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr17:50584619-50584624 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delGG / delG / dupG / dup(G)6
Variation Type
Indel Insertion and Deletion
Frequency
delGG=0.00000 (0/14046, ALFA)
delG=0.00000 (0/14046, ALFA)
dupG=0.00000 (0/14046, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
CACNA1G : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 14046 GGGGGG=1.00000 GGGG=0.00000, GGGGG=0.00000, GGGGGGG=0.00000 1.0 0.0 0.0 N/A
European Sub 9688 GGGGGG=1.0000 GGGG=0.0000, GGGGG=0.0000, GGGGGGG=0.0000 1.0 0.0 0.0 N/A
African Sub 2898 GGGGGG=1.0000 GGGG=0.0000, GGGGG=0.0000, GGGGGGG=0.0000 1.0 0.0 0.0 N/A
African Others Sub 114 GGGGGG=1.000 GGGG=0.000, GGGGG=0.000, GGGGGGG=0.000 1.0 0.0 0.0 N/A
African American Sub 2784 GGGGGG=1.0000 GGGG=0.0000, GGGGG=0.0000, GGGGGGG=0.0000 1.0 0.0 0.0 N/A
Asian Sub 112 GGGGGG=1.000 GGGG=0.000, GGGGG=0.000, GGGGGGG=0.000 1.0 0.0 0.0 N/A
East Asian Sub 86 GGGGGG=1.00 GGGG=0.00, GGGGG=0.00, GGGGGGG=0.00 1.0 0.0 0.0 N/A
Other Asian Sub 26 GGGGGG=1.00 GGGG=0.00, GGGGG=0.00, GGGGGGG=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 146 GGGGGG=1.000 GGGG=0.000, GGGGG=0.000, GGGGGGG=0.000 1.0 0.0 0.0 N/A
Latin American 2 Sub 608 GGGGGG=1.000 GGGG=0.000, GGGGG=0.000, GGGGGGG=0.000 1.0 0.0 0.0 N/A
South Asian Sub 98 GGGGGG=1.00 GGGG=0.00, GGGGG=0.00, GGGGGGG=0.00 1.0 0.0 0.0 N/A
Other Sub 496 GGGGGG=1.000 GGGG=0.000, GGGGG=0.000, GGGGGGG=0.000 1.0 0.0 0.0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 14046 (G)6=1.00000 delGG=0.00000, delG=0.00000, dupG=0.00000
Allele Frequency Aggregator European Sub 9688 (G)6=1.0000 delGG=0.0000, delG=0.0000, dupG=0.0000
Allele Frequency Aggregator African Sub 2898 (G)6=1.0000 delGG=0.0000, delG=0.0000, dupG=0.0000
Allele Frequency Aggregator Latin American 2 Sub 608 (G)6=1.000 delGG=0.000, delG=0.000, dupG=0.000
Allele Frequency Aggregator Other Sub 496 (G)6=1.000 delGG=0.000, delG=0.000, dupG=0.000
Allele Frequency Aggregator Latin American 1 Sub 146 (G)6=1.000 delGG=0.000, delG=0.000, dupG=0.000
Allele Frequency Aggregator Asian Sub 112 (G)6=1.000 delGG=0.000, delG=0.000, dupG=0.000
Allele Frequency Aggregator South Asian Sub 98 (G)6=1.00 delGG=0.00, delG=0.00, dupG=0.00
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 17 NC_000017.11:g.50584623_50584624del
GRCh38.p14 chr 17 NC_000017.11:g.50584624del
GRCh38.p14 chr 17 NC_000017.11:g.50584624dup
GRCh38.p14 chr 17 NC_000017.11:g.50584619_50584624dup
GRCh37.p13 chr 17 NC_000017.10:g.48661984_48661985del
GRCh37.p13 chr 17 NC_000017.10:g.48661985del
GRCh37.p13 chr 17 NC_000017.10:g.48661985dup
GRCh37.p13 chr 17 NC_000017.10:g.48661980_48661985dup
CACNA1G RefSeqGene NG_032024.1:g.28556_28557del
CACNA1G RefSeqGene NG_032024.1:g.28557del
CACNA1G RefSeqGene NG_032024.1:g.28557dup
CACNA1G RefSeqGene NG_032024.1:g.28552_28557dup
Gene: CACNA1G, calcium voltage-gated channel subunit alpha1 G (plus strand)
Molecule type Change Amino acid[Codon] SO Term
CACNA1G transcript variant 16 NM_001256324.2:c.2302-584…

NM_001256324.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 17 NM_001256325.2:c.2302-584…

NM_001256325.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 18 NM_001256326.2:c.2302-584…

NM_001256326.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 19 NM_001256327.2:c.2302-584…

NM_001256327.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 20 NM_001256328.2:c.2302-584…

NM_001256328.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 21 NM_001256329.2:c.2302-584…

NM_001256329.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 22 NM_001256330.2:c.2302-584…

NM_001256330.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 23 NM_001256331.2:c.2302-584…

NM_001256331.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 24 NM_001256332.2:c.2302-584…

NM_001256332.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 25 NM_001256333.2:c.2302-584…

NM_001256333.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 26 NM_001256334.2:c.2302-584…

NM_001256334.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 27 NM_001256359.2:c.2302-584…

NM_001256359.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 28 NM_001256360.2:c.2302-584…

NM_001256360.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 29 NM_001256361.2:c.2302-584…

NM_001256361.2:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 1 NM_018896.5:c.2302-5848_2…

NM_018896.5:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 14 NM_198376.3:c.2302-5848_2…

NM_198376.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 2 NM_198377.3:c.2302-5848_2…

NM_198377.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 9 NM_198378.3:c.2302-5848_2…

NM_198378.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 7 NM_198379.3:c.2302-5848_2…

NM_198379.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 5 NM_198380.3:c.2302-5848_2…

NM_198380.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 11 NM_198382.3:c.2302-5848_2…

NM_198382.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 6 NM_198383.3:c.2302-5848_2…

NM_198383.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 8 NM_198384.3:c.2302-5848_2…

NM_198384.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 4 NM_198385.3:c.2302-5848_2…

NM_198385.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 10 NM_198386.3:c.2302-5848_2…

NM_198386.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 12 NM_198387.3:c.2302-5848_2…

NM_198387.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 13 NM_198388.3:c.2302-5848_2…

NM_198388.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 3 NM_198396.3:c.2302-5848_2…

NM_198396.3:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant 30 NR_046054.2:n. N/A Intron Variant
CACNA1G transcript variant 31 NR_046055.2:n. N/A Intron Variant
CACNA1G transcript variant 32 NR_046056.2:n. N/A Intron Variant
CACNA1G transcript variant 33 NR_046057.2:n. N/A Intron Variant
CACNA1G transcript variant 34 NR_046058.2:n. N/A Intron Variant
CACNA1G transcript variant X1 XM_006722160.5:c.2302-584…

XM_006722160.5:c.2302-5848_2302-5847del

N/A Intron Variant
CACNA1G transcript variant X2 XM_006722161.5:c.2251-584…

XM_006722161.5:c.2251-5848_2251-5847del

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (G)6= delGG delG dupG dup(G)6
GRCh38.p14 chr 17 NC_000017.11:g.50584619_50584624= NC_000017.11:g.50584623_50584624del NC_000017.11:g.50584624del NC_000017.11:g.50584624dup NC_000017.11:g.50584619_50584624dup
GRCh37.p13 chr 17 NC_000017.10:g.48661980_48661985= NC_000017.10:g.48661984_48661985del NC_000017.10:g.48661985del NC_000017.10:g.48661985dup NC_000017.10:g.48661980_48661985dup
CACNA1G RefSeqGene NG_032024.1:g.28552_28557= NG_032024.1:g.28556_28557del NG_032024.1:g.28557del NG_032024.1:g.28557dup NG_032024.1:g.28552_28557dup
CACNA1G transcript variant 16 NM_001256324.1:c.2302-5852= NM_001256324.1:c.2302-5848_2302-5847del NM_001256324.1:c.2302-5847del NM_001256324.1:c.2302-5847dup NM_001256324.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 16 NM_001256324.2:c.2302-5852= NM_001256324.2:c.2302-5848_2302-5847del NM_001256324.2:c.2302-5847del NM_001256324.2:c.2302-5847dup NM_001256324.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 17 NM_001256325.1:c.2302-5852= NM_001256325.1:c.2302-5848_2302-5847del NM_001256325.1:c.2302-5847del NM_001256325.1:c.2302-5847dup NM_001256325.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 17 NM_001256325.2:c.2302-5852= NM_001256325.2:c.2302-5848_2302-5847del NM_001256325.2:c.2302-5847del NM_001256325.2:c.2302-5847dup NM_001256325.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 18 NM_001256326.1:c.2302-5852= NM_001256326.1:c.2302-5848_2302-5847del NM_001256326.1:c.2302-5847del NM_001256326.1:c.2302-5847dup NM_001256326.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 18 NM_001256326.2:c.2302-5852= NM_001256326.2:c.2302-5848_2302-5847del NM_001256326.2:c.2302-5847del NM_001256326.2:c.2302-5847dup NM_001256326.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 19 NM_001256327.1:c.2302-5852= NM_001256327.1:c.2302-5848_2302-5847del NM_001256327.1:c.2302-5847del NM_001256327.1:c.2302-5847dup NM_001256327.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 19 NM_001256327.2:c.2302-5852= NM_001256327.2:c.2302-5848_2302-5847del NM_001256327.2:c.2302-5847del NM_001256327.2:c.2302-5847dup NM_001256327.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 20 NM_001256328.1:c.2302-5852= NM_001256328.1:c.2302-5848_2302-5847del NM_001256328.1:c.2302-5847del NM_001256328.1:c.2302-5847dup NM_001256328.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 20 NM_001256328.2:c.2302-5852= NM_001256328.2:c.2302-5848_2302-5847del NM_001256328.2:c.2302-5847del NM_001256328.2:c.2302-5847dup NM_001256328.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 21 NM_001256329.1:c.2302-5852= NM_001256329.1:c.2302-5848_2302-5847del NM_001256329.1:c.2302-5847del NM_001256329.1:c.2302-5847dup NM_001256329.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 21 NM_001256329.2:c.2302-5852= NM_001256329.2:c.2302-5848_2302-5847del NM_001256329.2:c.2302-5847del NM_001256329.2:c.2302-5847dup NM_001256329.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 22 NM_001256330.1:c.2302-5852= NM_001256330.1:c.2302-5848_2302-5847del NM_001256330.1:c.2302-5847del NM_001256330.1:c.2302-5847dup NM_001256330.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 22 NM_001256330.2:c.2302-5852= NM_001256330.2:c.2302-5848_2302-5847del NM_001256330.2:c.2302-5847del NM_001256330.2:c.2302-5847dup NM_001256330.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 23 NM_001256331.1:c.2302-5852= NM_001256331.1:c.2302-5848_2302-5847del NM_001256331.1:c.2302-5847del NM_001256331.1:c.2302-5847dup NM_001256331.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 23 NM_001256331.2:c.2302-5852= NM_001256331.2:c.2302-5848_2302-5847del NM_001256331.2:c.2302-5847del NM_001256331.2:c.2302-5847dup NM_001256331.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 24 NM_001256332.1:c.2302-5852= NM_001256332.1:c.2302-5848_2302-5847del NM_001256332.1:c.2302-5847del NM_001256332.1:c.2302-5847dup NM_001256332.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 24 NM_001256332.2:c.2302-5852= NM_001256332.2:c.2302-5848_2302-5847del NM_001256332.2:c.2302-5847del NM_001256332.2:c.2302-5847dup NM_001256332.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 25 NM_001256333.1:c.2302-5852= NM_001256333.1:c.2302-5848_2302-5847del NM_001256333.1:c.2302-5847del NM_001256333.1:c.2302-5847dup NM_001256333.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 25 NM_001256333.2:c.2302-5852= NM_001256333.2:c.2302-5848_2302-5847del NM_001256333.2:c.2302-5847del NM_001256333.2:c.2302-5847dup NM_001256333.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 26 NM_001256334.1:c.2302-5852= NM_001256334.1:c.2302-5848_2302-5847del NM_001256334.1:c.2302-5847del NM_001256334.1:c.2302-5847dup NM_001256334.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 26 NM_001256334.2:c.2302-5852= NM_001256334.2:c.2302-5848_2302-5847del NM_001256334.2:c.2302-5847del NM_001256334.2:c.2302-5847dup NM_001256334.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 27 NM_001256359.1:c.2302-5852= NM_001256359.1:c.2302-5848_2302-5847del NM_001256359.1:c.2302-5847del NM_001256359.1:c.2302-5847dup NM_001256359.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 27 NM_001256359.2:c.2302-5852= NM_001256359.2:c.2302-5848_2302-5847del NM_001256359.2:c.2302-5847del NM_001256359.2:c.2302-5847dup NM_001256359.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 28 NM_001256360.1:c.2302-5852= NM_001256360.1:c.2302-5848_2302-5847del NM_001256360.1:c.2302-5847del NM_001256360.1:c.2302-5847dup NM_001256360.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 28 NM_001256360.2:c.2302-5852= NM_001256360.2:c.2302-5848_2302-5847del NM_001256360.2:c.2302-5847del NM_001256360.2:c.2302-5847dup NM_001256360.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 29 NM_001256361.1:c.2302-5852= NM_001256361.1:c.2302-5848_2302-5847del NM_001256361.1:c.2302-5847del NM_001256361.1:c.2302-5847dup NM_001256361.1:c.2302-5852_2302-5847dup
CACNA1G transcript variant 29 NM_001256361.2:c.2302-5852= NM_001256361.2:c.2302-5848_2302-5847del NM_001256361.2:c.2302-5847del NM_001256361.2:c.2302-5847dup NM_001256361.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 1 NM_018896.4:c.2302-5852= NM_018896.4:c.2302-5848_2302-5847del NM_018896.4:c.2302-5847del NM_018896.4:c.2302-5847dup NM_018896.4:c.2302-5852_2302-5847dup
CACNA1G transcript variant 1 NM_018896.5:c.2302-5852= NM_018896.5:c.2302-5848_2302-5847del NM_018896.5:c.2302-5847del NM_018896.5:c.2302-5847dup NM_018896.5:c.2302-5852_2302-5847dup
CACNA1G transcript variant 14 NM_198376.2:c.2302-5852= NM_198376.2:c.2302-5848_2302-5847del NM_198376.2:c.2302-5847del NM_198376.2:c.2302-5847dup NM_198376.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 14 NM_198376.3:c.2302-5852= NM_198376.3:c.2302-5848_2302-5847del NM_198376.3:c.2302-5847del NM_198376.3:c.2302-5847dup NM_198376.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 2 NM_198377.2:c.2302-5852= NM_198377.2:c.2302-5848_2302-5847del NM_198377.2:c.2302-5847del NM_198377.2:c.2302-5847dup NM_198377.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 2 NM_198377.3:c.2302-5852= NM_198377.3:c.2302-5848_2302-5847del NM_198377.3:c.2302-5847del NM_198377.3:c.2302-5847dup NM_198377.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 9 NM_198378.2:c.2302-5852= NM_198378.2:c.2302-5848_2302-5847del NM_198378.2:c.2302-5847del NM_198378.2:c.2302-5847dup NM_198378.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 9 NM_198378.3:c.2302-5852= NM_198378.3:c.2302-5848_2302-5847del NM_198378.3:c.2302-5847del NM_198378.3:c.2302-5847dup NM_198378.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 7 NM_198379.2:c.2302-5852= NM_198379.2:c.2302-5848_2302-5847del NM_198379.2:c.2302-5847del NM_198379.2:c.2302-5847dup NM_198379.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 7 NM_198379.3:c.2302-5852= NM_198379.3:c.2302-5848_2302-5847del NM_198379.3:c.2302-5847del NM_198379.3:c.2302-5847dup NM_198379.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 5 NM_198380.2:c.2302-5852= NM_198380.2:c.2302-5848_2302-5847del NM_198380.2:c.2302-5847del NM_198380.2:c.2302-5847dup NM_198380.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 5 NM_198380.3:c.2302-5852= NM_198380.3:c.2302-5848_2302-5847del NM_198380.3:c.2302-5847del NM_198380.3:c.2302-5847dup NM_198380.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 11 NM_198382.2:c.2302-5852= NM_198382.2:c.2302-5848_2302-5847del NM_198382.2:c.2302-5847del NM_198382.2:c.2302-5847dup NM_198382.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 11 NM_198382.3:c.2302-5852= NM_198382.3:c.2302-5848_2302-5847del NM_198382.3:c.2302-5847del NM_198382.3:c.2302-5847dup NM_198382.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 6 NM_198383.2:c.2302-5852= NM_198383.2:c.2302-5848_2302-5847del NM_198383.2:c.2302-5847del NM_198383.2:c.2302-5847dup NM_198383.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 6 NM_198383.3:c.2302-5852= NM_198383.3:c.2302-5848_2302-5847del NM_198383.3:c.2302-5847del NM_198383.3:c.2302-5847dup NM_198383.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 8 NM_198384.2:c.2302-5852= NM_198384.2:c.2302-5848_2302-5847del NM_198384.2:c.2302-5847del NM_198384.2:c.2302-5847dup NM_198384.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 8 NM_198384.3:c.2302-5852= NM_198384.3:c.2302-5848_2302-5847del NM_198384.3:c.2302-5847del NM_198384.3:c.2302-5847dup NM_198384.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 4 NM_198385.2:c.2302-5852= NM_198385.2:c.2302-5848_2302-5847del NM_198385.2:c.2302-5847del NM_198385.2:c.2302-5847dup NM_198385.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 4 NM_198385.3:c.2302-5852= NM_198385.3:c.2302-5848_2302-5847del NM_198385.3:c.2302-5847del NM_198385.3:c.2302-5847dup NM_198385.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 10 NM_198386.2:c.2302-5852= NM_198386.2:c.2302-5848_2302-5847del NM_198386.2:c.2302-5847del NM_198386.2:c.2302-5847dup NM_198386.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 10 NM_198386.3:c.2302-5852= NM_198386.3:c.2302-5848_2302-5847del NM_198386.3:c.2302-5847del NM_198386.3:c.2302-5847dup NM_198386.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 12 NM_198387.2:c.2302-5852= NM_198387.2:c.2302-5848_2302-5847del NM_198387.2:c.2302-5847del NM_198387.2:c.2302-5847dup NM_198387.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 12 NM_198387.3:c.2302-5852= NM_198387.3:c.2302-5848_2302-5847del NM_198387.3:c.2302-5847del NM_198387.3:c.2302-5847dup NM_198387.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 13 NM_198388.2:c.2302-5852= NM_198388.2:c.2302-5848_2302-5847del NM_198388.2:c.2302-5847del NM_198388.2:c.2302-5847dup NM_198388.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 13 NM_198388.3:c.2302-5852= NM_198388.3:c.2302-5848_2302-5847del NM_198388.3:c.2302-5847del NM_198388.3:c.2302-5847dup NM_198388.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant 3 NM_198396.2:c.2302-5852= NM_198396.2:c.2302-5848_2302-5847del NM_198396.2:c.2302-5847del NM_198396.2:c.2302-5847dup NM_198396.2:c.2302-5852_2302-5847dup
CACNA1G transcript variant 3 NM_198396.3:c.2302-5852= NM_198396.3:c.2302-5848_2302-5847del NM_198396.3:c.2302-5847del NM_198396.3:c.2302-5847dup NM_198396.3:c.2302-5852_2302-5847dup
CACNA1G transcript variant X1 XM_006722160.5:c.2302-5852= XM_006722160.5:c.2302-5848_2302-5847del XM_006722160.5:c.2302-5847del XM_006722160.5:c.2302-5847dup XM_006722160.5:c.2302-5852_2302-5847dup
CACNA1G transcript variant X2 XM_006722161.5:c.2251-5852= XM_006722161.5:c.2251-5848_2251-5847del XM_006722161.5:c.2251-5847del XM_006722161.5:c.2251-5847dup XM_006722161.5:c.2251-5852_2251-5847dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

5 SubSNP, 6 Frequency submissions
No Submitter Submission ID Date (Build)
1 GNOMAD ss4312573814 Apr 26, 2021 (155)
2 GNOMAD ss4312573815 Apr 26, 2021 (155)
3 GNOMAD ss4312573816 Apr 26, 2021 (155)
4 TOPMED ss5037818657 Apr 26, 2021 (155)
5 TOPMED ss5037818658 Apr 26, 2021 (155)
6 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 508838398 (NC_000017.11:50584618::GGGGGG 1/4414)
Row 508838399 (NC_000017.11:50584618:G: 1/4414)
Row 508838400 (NC_000017.11:50584618:GG: 2/4414)

- Apr 26, 2021 (155)
7 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 508838398 (NC_000017.11:50584618::GGGGGG 1/4414)
Row 508838399 (NC_000017.11:50584618:G: 1/4414)
Row 508838400 (NC_000017.11:50584618:GG: 2/4414)

- Apr 26, 2021 (155)
8 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 508838398 (NC_000017.11:50584618::GGGGGG 1/4414)
Row 508838399 (NC_000017.11:50584618:G: 1/4414)
Row 508838400 (NC_000017.11:50584618:GG: 2/4414)

- Apr 26, 2021 (155)
9 TopMed

Submission ignored due to conflicting rows:
Row 253364319 (NC_000017.11:50584618:G: 3/264690)
Row 253364320 (NC_000017.11:50584618:GG: 3/264690)

- Apr 26, 2021 (155)
10 TopMed

Submission ignored due to conflicting rows:
Row 253364319 (NC_000017.11:50584618:G: 3/264690)
Row 253364320 (NC_000017.11:50584618:GG: 3/264690)

- Apr 26, 2021 (155)
11 ALFA NC_000017.11 - 50584619 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4312573816, ss5037818658 NC_000017.11:50584618:GG: NC_000017.11:50584618:GGGGGG:GGGG (self)
6113719410 NC_000017.11:50584618:GGGGGG:GGGG NC_000017.11:50584618:GGGGGG:GGGG (self)
ss4312573815, ss5037818657 NC_000017.11:50584618:G: NC_000017.11:50584618:GGGGGG:GGGGG (self)
6113719410 NC_000017.11:50584618:GGGGGG:GGGGG NC_000017.11:50584618:GGGGGG:GGGGG (self)
6113719410 NC_000017.11:50584618:GGGGGG:GGGGG…

NC_000017.11:50584618:GGGGGG:GGGGGGG

NC_000017.11:50584618:GGGGGG:GGGGG…

NC_000017.11:50584618:GGGGGG:GGGGGGG

(self)
ss4312573814 NC_000017.11:50584618::GGGGGG NC_000017.11:50584618:GGGGGG:GGGGG…

NC_000017.11:50584618:GGGGGG:GGGGGGGGGGGG

(self)
Removed from this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Destination RSIDs
ss2382399476 NC_000017.10:48661979:G: NC_000017.11:50584618:GGGGGG:GGGGG
ss3264275632 NC_000017.11:50584618::G NC_000017.11:50584618:GGGGGG:GGGGG…

NC_000017.11:50584618:GGGGGG:GGGGGGG

Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1005241118

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d