SNP Links for Nucleotide (Select 683524112) - SNP

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Links from Nucleotide

Items: 1 to 20 of 422

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Select item 14897788491.

rs1489778849 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:105603057 (GRCh38)
1:106145679 (GRCh37)
Canonical SPDI:: NC_000001.11:105603056:T:G
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.105603057T>G, NC_000001.10:g.106145679T>G, NR_125954.1:n.921A>C

Select item 14891852462.

rs1489185246 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:105603522 (GRCh38)
1:106146144 (GRCh37)
Canonical SPDI:: NC_000001.11:105603521:C:T
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000066/1 (ALFA)
T=0.000023/3 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.105603522C>T, NC_000001.10:g.106146144C>T, NR_125954.1:n.456G>A

Select item 14887973973.

rs1488797397 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:105602593 (GRCh38)
1:106145215 (GRCh37)
Canonical SPDI:: NC_000001.11:105602592:C:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.105602593C>A, NC_000001.10:g.106145215C>A, NR_125954.1:n.1385G>T

Select item 14881184194.

rs1488118419 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:105602970 (GRCh38)
1:106145592 (GRCh37)
Canonical SPDI:: NC_000001.11:105602969:T:G
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.105602970T>G, NC_000001.10:g.106145592T>G, NR_125954.1:n.1008A>C

Select item 14866860155.

rs1486686015 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:105602160 (GRCh38)
1:106144782 (GRCh37)
Canonical SPDI:: NC_000001.11:105602159:T:C
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.105602160T>C, NC_000001.10:g.106144782T>C, NR_125954.1:n.1818A>G

Select item 14864642256.

rs1486464225 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:105603525 (GRCh38)
1:106146147 (GRCh37)
Canonical SPDI:: NC_000001.11:105603524:GG:G
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.105603526del, NC_000001.10:g.106146148del, NR_125954.1:n.453del

Select item 14849285827.

rs1484928582 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:105602369 (GRCh38)
1:106144991 (GRCh37)
Canonical SPDI:: NC_000001.11:105602368:C:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.105602369C>A, NC_000001.10:g.106144991C>A, NR_125954.1:n.1609G>T

Select item 14827179538.

rs1482717953 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:105604194 (GRCh38)
1:106146816 (GRCh37)
Canonical SPDI:: NC_000001.11:105604193:C:T
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.009259/2 (Vietnamese)
HGVS:: NC_000001.11:g.105604194C>T, NC_000001.10:g.106146816C>T, NR_125954.1:n.388G>A, NR_125955.1:n.304G>A

Select item 14809182939.

rs1480918293 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:105603040 (GRCh38)
1:106145662 (GRCh37)
Canonical SPDI:: NC_000001.11:105603039:T:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.105603040T>A, NC_000001.10:g.106145662T>A, NR_125954.1:n.938A>T

Select item 148027208010.

rs1480272080 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:105602153 (GRCh38)
1:106144775 (GRCh37)
Canonical SPDI:: NC_000001.11:105602152:T:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.105602153T>A, NC_000001.10:g.106144775T>A, NR_125954.1:n.1825A>T

Select item 148022048911.

rs1480220489 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:105603133 (GRCh38)
1:106145755 (GRCh37)
Canonical SPDI:: NC_000001.11:105603132:T:C
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.105603133T>C, NC_000001.10:g.106145755T>C, NR_125954.1:n.845A>G

Select item 147948679212.

rs1479486792 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:105602370 (GRCh38)
1:106144992 (GRCh37)
Canonical SPDI:: NC_000001.11:105602369:C:T
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.105602370C>T, NC_000001.10:g.106144992C>T, NR_125954.1:n.1608G>A

Select item 147943606813.

rs1479436068 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:105603381 (GRCh38)
1:106146003 (GRCh37)
Canonical SPDI:: NC_000001.11:105603380:G:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.105603381G>A, NC_000001.10:g.106146003G>A, NR_125954.1:n.597C>T

Select item 147860497114.

rs1478604971 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:105603304 (GRCh38)
1:106145926 (GRCh37)
Canonical SPDI:: NC_000001.11:105603303:G:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
A=0.000142/2 (TOMMO)
HGVS:: NC_000001.11:g.105603304G>A, NC_000001.10:g.106145926G>A, NR_125954.1:n.674C>T

Select item 147638537415.

rs1476385374 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:105603148 (GRCh38)
1:106145770 (GRCh37)
Canonical SPDI:: NC_000001.11:105603147:T:C
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.105603148T>C, NC_000001.10:g.106145770T>C, NR_125954.1:n.830A>G

Select item 147435120516.

rs1474351205 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:105602153 (GRCh38)
1:106144776 (GRCh37)
Canonical SPDI:: NC_000001.11:105602153::A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.105602153_105602154insA, NC_000001.10:g.106144775_106144776insA, NR_125954.1:n.1824_1825insT

Select item 147188932817.

rs1471889328 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:105618918 (GRCh38)
1:106161540 (GRCh37)
Canonical SPDI:: NC_000001.11:105618917:C:A
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000029/4 (GnomAD)
A=0.000684/2 (KOREAN)
HGVS:: NC_000001.11:g.105618918C>A, NC_000001.10:g.106161540C>A, NR_125954.1:n.18G>T, NR_125955.1:n.18G>T

Select item 147052410918.

rs1470524109 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:105602277 (GRCh38)
1:106144899 (GRCh37)
Canonical SPDI:: NC_000001.11:105602276:A:G
Gene:: LINC01676 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000001.11:g.105602277A>G, NC_000001.10:g.106144899A>G, NR_125954.1:n.1701T>C

Select item 146682505419.

rs1466825054 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:105603088 (GRCh38)
1:106145710 (GRCh37)
Canonical SPDI:: NC_000001.11:105603087:C:T
Gene:: LINC01676 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.105603088C>T, NC_000001.10:g.106145710C>T, NR_125954.1:n.890G>A

Select item 146069741520.

rs1460697415 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:105602337 (GRCh38)
1:106144959 (GRCh37)
Canonical SPDI:: NC_000001.11:105602336:A:T
Gene:: LINC01676 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.105602337A>T, NC_000001.10:g.106144959A>T, NR_125954.1:n.1641T>A