Links from Gene
Items: 1 to 20 of 2508
1.
rs1490807175 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 7:143817269
(GRCh38)
7:143514362
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143817268:G:A,NC_000007.14:143817268:G:T
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.00005/1
(GnomAD)
T=0.00016/1
(1000Genomes)
- HGVS:
3.
rs1490662947 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 7:143837051
(GRCh38)
7:143534144
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143837050:C:G,NC_000007.14:143837050:C:T
- Gene:
- LOC154761 (Varview), LOC112267988 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
T=0.000012/1
(GnomAD)
- HGVS:
NC_000007.14:g.143837051C>G, NC_000007.14:g.143837051C>T, NC_000007.13:g.143534144C>G, NC_000007.13:g.143534144C>T, NW_018654714.1:g.381355C>G, NW_018654714.1:g.381355C>T, XR_002956525.2:n.289C>G, XR_002956525.2:n.289C>T, XR_002956525.1:n.53C>G, XR_002956525.1:n.53C>T, XR_002959120.2:n.289C>G, XR_002959120.2:n.289C>T, XR_002959120.1:n.53C>G, XR_002959120.1:n.53C>T
5.
rs1490332523 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 7:143816894
(GRCh38)
7:143513987
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143816893:T:C
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
6.
rs1490301608 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 7:143818446
(GRCh38)
7:143515540
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143818446:AAAAAA:AAAAAAA
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAA=0./0
(
ALFA)
A=0.000008/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS:
7.
rs1490221727 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 7:143823583
(GRCh38)
7:143520676
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143823582:C:A
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000084/1
(
ALFA)
A=0.000173/24
(GnomAD)
- HGVS:
8.
rs1490206017 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 7:143818283
(GRCh38)
7:143515376
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143818282:G:A
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.00008/1
(
ALFA)
A=0.00004/3
(GnomAD)
- HGVS:
11.
rs1489843517 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 7:143815449
(GRCh38)
7:143512542
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143815448:C:T
- Gene:
- LOC154761 (Varview), TCAF2P1 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.00098/3
(GnomAD)
- HGVS:
13.
rs1489462490 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 7:143824024
(GRCh38)
7:143521117
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143824023:A:G
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
16.
rs1488687672 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 7:143827029
(GRCh38)
7:143524122
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143827028:C:A
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.00001/1
(GnomAD)
- HGVS:
17.
rs1488571799 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 7:143823354
(GRCh38)
7:143520447
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143823353:C:T
- Gene:
- LOC154761 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
20.
rs1488293245 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 7:143812634
(GRCh38)
7:143509727
(GRCh37)
- Canonical SPDI:
- NC_000007.14:143812633:G:A
- Gene:
- LOC154761 (Varview), TCAF2P1 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.00108/18
(TOMMO)
A=0.00319/8
(KOREAN)
- HGVS: