SNP Links for Gene (Select 100423035) - SNP

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Links from Gene

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Select item 14901996801.

rs1490199680 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:75762437 (GRCh38)
15:76054778 (GRCh37)
Canonical SPDI:: NC_000015.10:75762436:G:C
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.75762437G>C, NC_000015.9:g.76054778G>C

Select item 14900063902.

rs1490006390 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 15:75762653 (GRCh38)
15:76054994 (GRCh37)
Canonical SPDI:: NC_000015.10:75762652:A:
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,splice_acceptor_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.75762653del, NC_000015.9:g.76054994del

Select item 14898685163.

rs1489868516 [Homo sapiens]

Variant type:: DEL
Alleles:: GAAGC>- [Show Flanks]
Chromosome:: 15:75763558 (GRCh38)
15:76055899 (GRCh37)
Canonical SPDI:: NC_000015.10:75763557:GAAGC:
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.75763558_75763562del, NC_000015.9:g.76055899_76055903del

Select item 14896261354.

rs1489626135 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:75763300 (GRCh38)
15:76055641 (GRCh37)
Canonical SPDI:: NC_000015.10:75763299:T:C
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000034/9 (TOPMED)
HGVS:: NC_000015.10:g.75763300T>C, NC_000015.9:g.76055641T>C, XR_932484.3:n.692T>C, XR_932484.2:n.1610T>C, XR_932484.1:n.875T>C, XR_932486.3:n.672T>C, XR_932486.2:n.1590T>C, XR_932486.1:n.861T>C, XR_932487.3:n.597T>C, XR_932487.2:n.1515T>C, XR_932487.1:n.779T>C, XR_002957748.2:n.678T>C, XR_002957748.1:n.1596T>C, XR_002957750.2:n.658T>C, XR_002957750.1:n.1576T>C, XR_002957749.2:n.583T>C, XR_002957749.1:n.1501T>C, XR_007064722.1:n.571T>C

Select item 14848530615.

rs1484853061 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:75763897 (GRCh38)
15:76056238 (GRCh37)
Canonical SPDI:: NC_000015.10:75763896:G:A,NC_000015.10:75763896:G:T
Gene:: MIR4313 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.75763897G>A, NC_000015.10:g.75763897G>T, NC_000015.9:g.76056238G>A, NC_000015.9:g.76056238G>T

Select item 14848022616.

rs1484802261 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:75762957 (GRCh38)
15:76055298 (GRCh37)
Canonical SPDI:: NC_000015.10:75762956:C:A,NC_000015.10:75762956:C:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.75762957C>A, NC_000015.10:g.75762957C>T, NC_000015.9:g.76055298C>A, NC_000015.9:g.76055298C>T

Select item 14840576817.

rs1484057681 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:75762756 (GRCh38)
15:76055097 (GRCh37)
Canonical SPDI:: NC_000015.10:75762755:G:A
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000015.10:g.75762756G>A, NC_000015.9:g.76055097G>A

Select item 14836589818.

rs1483658981 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:75762854 (GRCh38)
15:76055195 (GRCh37)
Canonical SPDI:: NC_000015.10:75762853:C:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.75762854C>T, NC_000015.9:g.76055195C>T

Select item 14824236369.

rs1482423636 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 15:75762380 (GRCh38)
15:76054721 (GRCh37)
Canonical SPDI:: NC_000015.10:75762379:GGG:GG
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.75762382del, NC_000015.9:g.76054723del, XR_932484.3:n.234del, XR_932484.2:n.1152del, XR_932484.1:n.417del, XR_932486.3:n.234del, XR_932486.2:n.1152del, XR_932486.1:n.423del, XR_932487.3:n.234del, XR_932487.2:n.1152del, XR_932487.1:n.416del, XR_002957748.2:n.220del, XR_002957748.1:n.1138del, XR_002957750.2:n.220del, XR_002957750.1:n.1138del, XR_002957749.2:n.220del, XR_002957749.1:n.1138del, XR_007064722.1:n.113del

Select item 148138571210.

rs1481385712 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:75764030 (GRCh38)
15:76056371 (GRCh37)
Canonical SPDI:: NC_000015.10:75764029:C:T
Gene:: MIR4313 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.75764030C>T, NC_000015.9:g.76056371C>T

Select item 148133605311.

rs1481336053 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 15:75763165 (GRCh38)
15:76055506 (GRCh37)
Canonical SPDI:: NC_000015.10:75763164:A:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.75763165A>T, NC_000015.9:g.76055506A>T, XR_932484.3:n.557A>T, XR_932484.2:n.1475A>T, XR_932484.1:n.740A>T, XR_932486.3:n.537A>T, XR_932486.2:n.1455A>T, XR_932486.1:n.726A>T, XR_932487.3:n.462A>T, XR_932487.2:n.1380A>T, XR_932487.1:n.644A>T, XR_002957748.2:n.543A>T, XR_002957748.1:n.1461A>T, XR_002957750.2:n.523A>T, XR_002957750.1:n.1441A>T, XR_002957749.2:n.448A>T, XR_002957749.1:n.1366A>T, XR_007064722.1:n.436A>T

Select item 147969809912.

rs1479698099 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:75762750 (GRCh38)
15:76055091 (GRCh37)
Canonical SPDI:: NC_000015.10:75762749:G:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: splice_donor_variant,upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.75762750G>T, NC_000015.9:g.76055091G>T

Select item 147830332013.

rs1478303320 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:75764032 (GRCh38)
15:76056373 (GRCh37)
Canonical SPDI:: NC_000015.10:75764031:C:G
Gene:: MIR4313 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.75764032C>G, NC_000015.9:g.76056373C>G

Select item 147779065614.

rs1477790656 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:75764298 (GRCh38)
15:76056639 (GRCh37)
Canonical SPDI:: NC_000015.10:75764297:C:G
Gene:: MIR4313 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000043/6 (GnomAD)
G=0.000045/12 (TOPMED)
HGVS:: NC_000015.10:g.75764298C>G, NC_000015.9:g.76056639C>G

Select item 147593068515.

rs1475930685 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:75763464 (GRCh38)
15:76055805 (GRCh37)
Canonical SPDI:: NC_000015.10:75763463:C:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: upstream_transcript_variant,500B_downstream_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.75763464C>T, NC_000015.9:g.76055805C>T

Select item 147533155216.

rs1475331552 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 15:75763544 (GRCh38)
15:76055885 (GRCh37)
Canonical SPDI:: NC_000015.10:75763543:G:A,NC_000015.10:75763543:G:C
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: upstream_transcript_variant,500B_downstream_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.75763544G>A, NC_000015.10:g.75763544G>C, NC_000015.9:g.76055885G>A, NC_000015.9:g.76055885G>C

Select item 147477532417.

rs1474775324 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:75762868 (GRCh38)
15:76055209 (GRCh37)
Canonical SPDI:: NC_000015.10:75762867:C:T
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.75762868C>T, NC_000015.9:g.76055209C>T

Select item 147283963718.

rs1472839637 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 15:75762351 (GRCh38)
15:76054692 (GRCh37)
Canonical SPDI:: NC_000015.10:75762350:T:
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.75762351del, NC_000015.9:g.76054692del, XR_932484.3:n.203del, XR_932484.2:n.1121del, XR_932484.1:n.386del, XR_932486.3:n.203del, XR_932486.2:n.1121del, XR_932486.1:n.392del, XR_932487.3:n.203del, XR_932487.2:n.1121del, XR_932487.1:n.385del, XR_002957748.2:n.189del, XR_002957748.1:n.1107del, XR_002957750.2:n.189del, XR_002957750.1:n.1107del, XR_002957749.2:n.189del, XR_002957749.1:n.1107del, XR_007064722.1:n.82del

Select item 147151320519.

rs1471513205 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:75762549 (GRCh38)
15:76054890 (GRCh37)
Canonical SPDI:: NC_000015.10:75762548:G:A
Gene:: MIR4313 (Varview), LOC101929408 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.75762549G>A, NC_000015.9:g.76054890G>A