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GenBank: JAHUYP000000000.1
LOCUS JAHUYP010000000 121 rc DNA linear BCT 14-JUL-2021 DEFINITION Klebsiella pneumoniae subsp. pneumoniae strain WRC28_CMC387MPC, whole genome shotgun sequencing project. ACCESSION JAHUYP000000000 VERSION JAHUYP000000000.1 DBLINK BioProject: PRJNA744686 BioSample: SAMN20114561 KEYWORDS WGS. SOURCE Klebsiella pneumoniae subsp. pneumoniae ORGANISM Klebsiella pneumoniae subsp. pneumoniae Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella; Klebsiella pneumoniae complex. REFERENCE 1 (bases 1 to 121) AUTHORS Balaji,V., Snehal,P., Yamuna,B.D. and Monisha,P. TITLE Carbapenem resistant Klebsiella pneumoniae_WRC28_CMC387MPC JOURNAL Unpublished REFERENCE 2 (bases 1 to 121) AUTHORS Balaji,V., Snehal,P., Yamuna,B.D. and Monisha,P. TITLE Direct Submission JOURNAL Submitted (08-JUL-2021) Clinical Microbiology, Christian Medical College, Ida Scudder Road, Vellore, Tamil Nadu 632004, India COMMENT The Klebsiella pneumoniae subsp. pneumoniae whole genome shotgun (WGS) project has the project accession JAHUYP000000000. This version of the project (01) has the accession number JAHUYP010000000, and consists of sequences JAHUYP010000001-JAHUYP010000121. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Bacteria and source DNA available from Christian medical college. ##Genome-Assembly-Data-START## Assembly Date :: 2021 Assembly Method :: UNICYCLER v. V.0.4.8 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 188.0x Sequencing Technology :: Illumina MiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/09/2021 14:53:58 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 5.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,732 CDSs (total) :: 5,645 Genes (coding) :: 5,539 CDSs (with protein) :: 5,539 Genes (RNA) :: 87 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1 (5S, 16S) partial rRNAs :: 1 (23S) tRNAs :: 77 ncRNAs :: 7 Pseudo Genes (total) :: 106 CDSs (without protein) :: 106 Pseudo Genes (ambiguous residues) :: 0 of 106 Pseudo Genes (frameshifted) :: 54 of 106 Pseudo Genes (incomplete) :: 43 of 106 Pseudo Genes (internal stop) :: 25 of 106 Pseudo Genes (multiple problems) :: 15 of 106 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..121 /organism="Klebsiella pneumoniae subsp. pneumoniae" /mol_type="genomic DNA" /strain="WRC28_CMC387MPC" /isolation_source="blood" /host="Homo sapiens" /sub_species="pneumoniae" /db_xref="taxon:72407" /geo_loc_name="India" /lat_lon="12.9165 N 79.1325 E" /collection_date="2018" /collected_by="Christian Medical College" WGS JAHUYP010000001-JAHUYP010000121 //
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