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    MICPUCDRAFT_6481 uncharacterized protein [ Micromonas pusilla CCMP1545 ]

    Gene ID: 9688950, updated on 1-Feb-2024

    Summary

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    Gene symbol
    MICPUCDRAFT_6481
    Gene description
    uncharacterized protein
    Locus tag
    MICPUCDRAFT_6481
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas pusilla CCMP1545 (strain: CCMP1545)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUCDRAFT_6481 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003315895.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315895.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables MAP kinase phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in abscisic acid-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in auxin-activated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315895.1 Reference assembly

      Range
      729816..730664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003063271.1 → XP_003063317.1  uncharacterized protein MICPUCDRAFT_6481, partial [Micromonas pusilla CCMP1545]

      See identical proteins and their annotated locations for XP_003063317.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1N6D0
      Conserved Domains (1) summary
      cl21483
      Location:48 → 181
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Nucleotide Protein
    Heading Accession and Version

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