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    LOC9663369 uncharacterized LOC9663369 [ Selaginella moellendorffii ]

    Gene ID: 9663369, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9663369
    Gene description
    uncharacterized LOC9663369
    Locus tag
    SELMODRAFT_449151
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9663369 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314422.1 (60931..65509)

    NW_003314422.1Genomic Context describing neighboring genes Neighboring gene NDR1/HIN1-like protein 26 Neighboring gene uncharacterized LOC112343535 Neighboring gene probable disease resistance protein At5g66910 Neighboring gene probable C-terminal domain small phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314422 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC9663369

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314422.1 Reference v1.0

      Range
      60931..65509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002993465.2 → XP_002993511.1  uncharacterized protein LOC9663369

      See identical proteins and their annotated locations for XP_002993511.1

      UniProtKB/TrEMBL
      D8TD49
      Conserved Domains (4) summary
      cd09122
      Location:239 → 405
      PLDc_Tdp1_1; Catalytic domain, repeat 1, of Tyrosyl-DNA phosphodiesterase
      cd09123
      Location:628 → 823
      PLDc_Tdp1_2; Catalytic domain, repeat 2, of tyrosyl-DNA phosphodiesterase
      cd00060
      Location:7 → 104
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      cl07418
      Location:503 → 576
      HIRAN; HIRAN domain

    2. XM_024667181.1 → XP_024522949.1  uncharacterized protein LOC9663369

      UniProtKB/TrEMBL
      D8TD49
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials