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    LOC9635127 upstream activation factor subunit spp27 [ Selaginella moellendorffii ]

    Gene ID: 9635127, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9635127
    Gene description
    upstream activation factor subunit spp27
    Locus tag
    SELMODRAFT_419232
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9635127 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314302.1 (1060211..1062189)

    NW_003314302.1Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g74360 Neighboring gene uncharacterized LOC9635126 Neighboring gene flocculation protein FLO11 Neighboring gene uncharacterized LOC112349666 Neighboring gene uncharacterized LOC112349665 Neighboring gene pentatricopeptide repeat-containing protein At4g02750

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314302 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    upstream activation factor subunit spp27

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314302.1 Reference v1.0

      Range
      1060211..1062189
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002979442.2 → XP_002979488.1  upstream activation factor subunit spp27

      See identical proteins and their annotated locations for XP_002979488.1

      UniProtKB/TrEMBL
      D8S898
      Conserved Domains (2) summary
      pfam02201
      Location:140 → 210
      SWIB; SWIB/MDM2 domain
      pfam08766
      Location:20 → 71
      DEK_C; DEK C terminal domain

    RNA

    1. XR_002993462.1 RNA Sequence

    2. XR_002993460.1 RNA Sequence

    3. XR_002993461.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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