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    rpn9 26S proteasome regulatory complex [ Volvox carteri f. nagariensis ]

    Gene ID: 9628744, updated on 10-Jan-2024

    Summary

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    Gene symbol
    rpn9
    Gene description
    26S proteasome regulatory complex
    Locus tag
    VOLCADRAFT_109166
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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    Genomic context

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    See rpn9 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_003307573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307573.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proteasome regulatory particle, lid subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    26S proteasome regulatory complex
    XP_002952493.1
    • lid subcomplex, non-ATPase subunit Rpn9 (subunit 13; Psd13; PSMD13)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307573.1 Reference assembly

      Range
      314475..318594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002952447.1 → XP_002952493.1  26S proteasome regulatory complex [Volvox carteri f. nagariensis]

      See identical proteins and their annotated locations for XP_002952493.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8U1H0
      Conserved Domains (1) summary
      pfam01399
      Location:238 → 346
      PCI; PCI domain
    Nucleotide Protein
    Heading Accession and Version

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