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    arpC4 actin-related protein ArpC4 [ Volvox carteri f. nagariensis ]

    Gene ID: 9625512, updated on 10-Jan-2024

    Summary

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    Gene symbol
    arpC4
    Gene description
    actin-related protein ArpC4
    Locus tag
    VOLCADRAFT_72447
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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    Genomic context

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    See arpC4 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003307545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ATP synthase, subunit gamma, chloroplast precursor Neighboring gene mitochondrial ribosomal protein L29

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307545.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Arp2/3 protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-related protein ArpC4
    XP_002945817.1
    • encodes actin-related protein complex member ArpC4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307545.1 Reference assembly

      Range
      3230529..3232321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002945771.1 → XP_002945817.1  actin-related protein ArpC4 [Volvox carteri f. nagariensis]

      See identical proteins and their annotated locations for XP_002945817.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8TI15
      Conserved Domains (1) summary
      pfam05856
      Location:1 → 166
      ARPC4; ARP2/3 complex 20 kDa subunit (ARPC4)
    Nucleotide Protein
    Heading Accession and Version

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