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    VOLCADRAFT_86489 uncharacterized protein [ Volvox carteri f. nagariensis ]

    Gene ID: 9625332, updated on 10-Jan-2024

    Summary

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    Gene symbol
    VOLCADRAFT_86489
    Gene description
    uncharacterized protein
    Locus tag
    VOLCADRAFT_86489
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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    Genomic context

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    See VOLCADRAFT_86489 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    9

    NW_003307545.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003307545.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in snRNA transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in snRNA transcription by RNA polymerase III IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of snRNA-activating protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_002946327.1
    • predicted protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003307545.1 Reference assembly

      Range
      5889500..5897503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002946281.1 → XP_002946327.1  uncharacterized protein VOLCADRAFT_86489 [Volvox carteri f. nagariensis]

      See identical proteins and their annotated locations for XP_002946327.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8TGU9
      Conserved Domains (1) summary
      pfam09808
      Location:725 → 783
      SNAPc_SNAP43; Small nuclear RNA activating complex (SNAPc), subunit SNAP43
    Nucleotide Protein
    Heading Accession and Version

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