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    PITG_13015 uncharacterized protein [ Phytophthora infestans T30-4 ]

    Gene ID: 9474518, updated on 17-May-2024

    Summary

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    Gene symbol
    PITG_13015
    Gene description
    uncharacterized protein
    Locus tag
    PITG_13015
    See related
    FungiDB:PITG_13015; VEuPathDB:PITG_13015
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Phytophthora infestans T30-4 (strain: T30-4)
    Lineage
    Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora
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    Genomic context

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    See PITG_13015 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_003303734.1Genomic Context describing neighboring genes Neighboring gene nitrite reductase [NAD(P)H], putative Neighboring gene proliferation-associated protein, metalloprotease family M24X, putative Neighboring gene pescadillo-like protein Neighboring gene ATP-dependent RNA helicase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003303734.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003303734.1 Reference assembly

      Range
      761837..763628
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002900510.1 → XP_002900556.1  uncharacterized protein PITG_13015 [Phytophthora infestans T30-4]

      See identical proteins and their annotated locations for XP_002900556.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A833SVI1, D0NK34
      Conserved Domains (3) summary
      cd00183
      Location:432 → 495
      TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
      pfam00855
      Location:7 → 116
      PWWP; PWWP domain
      pfam08766
      Location:251 → 293
      DEK_C; DEK C terminal domain
    Nucleotide Protein
    Heading Accession and Version

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