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    ynfD DUF1161 domain-containing protein YnfD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946133, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ynfD
    Official Full Name
    DUF1161 domain-containing protein YnfD
    Primary source
    ECOCYC:G6844
    Locus tag
    b1586
    See related
    ASAP:ABE-0005297
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1581
    Summary
    The protein has been detected . [More information is available at EcoCyc: G6844].
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    Genomic context

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    Sequence:
    NC_000913.3 (1657565..1657870)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene spermidine N-acetyltransferase Neighboring gene PF06788 family lipoprotein YnfC Neighboring gene putative selenate reductase YnfE Neighboring gene putative selenate reductase YnfF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Climbing the protein ladder. Dovichi NJ. Nat Biotechnol, 2004 Oct. PMID 15470461
    2. Protein sequencing by mass analysis of polypeptide ladders after controlled protein hydrolysis. Zhong H, et al. Nat Biotechnol, 2004 Oct. PMID 15361881
    3. Small genes/gene-products in Escherichia coli K-12. Wasinger VC, et al. FEMS Microbiol Lett, 1998 Dec 15. PMID 9868784
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on mature peptide
      Title: Small genes/gene-products in Escherichia coli K-12.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF1161 domain-containing protein YnfD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1657565..1657870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416103.2 DUF1161 domain-containing protein YnfD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416103.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q6EWW5
      Conserved Domains (1) summary
      pfam06649
      Location:26 → 79
      DUF1161; Protein of unknown function (DUF1161)
    Nucleotide Protein
    Heading Accession and Version

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