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    yncJ DUF2554 domain-containing protein YncJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945990, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yncJ
    Official Full Name
    DUF2554 domain-containing protein YncJ
    Primary source
    ECOCYC:G6747
    Locus tag
    b1436
    See related
    ASAP:ABE-0004789
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1430
    Summary
    First 22 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG14300].
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    Genomic context

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    Sequence:
    NC_000913.3 (1508834..1509064, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator SutR Neighboring gene 23S rRNA 5-hydroxycytidine C2501 synthase Neighboring gene mRNA interferase toxin HicA Neighboring gene antitoxin of the HicA-HicB toxin-antitoxin system/ DNA-binding transcriptional repressor HicB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional response of Escherichia coli to external copper. Yamamoto K, et al. Mol Microbiol, 2005 Apr. PMID 15773991
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF2554 domain-containing protein YncJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1508834..1509064 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415953.1 DUF2554 domain-containing protein YncJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415953.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376K114
      Conserved Domains (1) summary
      pfam10829
      Location:1 → 76
      DUF2554; Protein of unknown function (DUF2554)
    Nucleotide Protein
    Heading Accession and Version

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