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    rtp replication terminator protein [ Bacillus subtilis subsp. subtilis str. 168 ]

    Gene ID: 940068, updated on 10-Oct-2024

    Summary

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    Gene symbol
    rtp
    Gene description
    replication terminator protein
    Locus tag
    BSU_18490
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
    Lineage
    Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
    Old locus tag
    BSU18490
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    Genomic context

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    Sequence:
    NC_000964.3 (2017886..2018254, complement)

    NC_000964.3Genomic Context describing neighboring genes Neighboring gene transcriptional regulator (LysR family) (GltC-glutamate) Neighboring gene glutamate 5-kinase Neighboring gene pyrroline-5-carboxylate reductase Neighboring gene putative oxido-reductase Neighboring gene transition-dependent and sulfur-related metabolism protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000964.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site. Vivian JP, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2006 Nov 1. PMID 17077489, Free PMC Article
    2. Interaction of the replication terminator protein of Bacillus subtilis with DNA probed by NMR spectroscopy. Hastings AF, et al. Biochem Biophys Res Commun, 2005 Sep 23. PMID 16061201
    3. An asymmetric structure of the Bacillus subtilis replication terminator protein in complex with DNA. Vivian JP, et al. J Mol Biol, 2007 Jul 13. PMID 17521668
    4. DNA replication fork arrest by the Bacillus subtilis RTP-DNA complex involves a mechanism that is independent of the affinity of RTP-DNA binding. Duggin IG. J Mol Biol, 2006 Aug 4. PMID 16822523
    5. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Results report the crystal structure of a replication terminator protein homologue (RTP.C110S) of B. subtilis in complex with the high affinity component of one of its cognate DNA termination sites, known as the TerI B-site, refined at 2.5 A resolution.
      Title: An asymmetric structure of the Bacillus subtilis replication terminator protein in complex with DNA.
    2. The functional terminator complex comprises two homodimers each of 29 kDa bound to overlapping binding sites.
      Title: Crystallization and preliminary X-ray diffraction analysis of the Bacillus subtilis replication termination protein in complex with the 37-base-pair TerI-binding site.
    3. NMR analysis of interaction of the replication terminator protein of Bacillus subtilis with DNA
      Title: Interaction of the replication terminator protein of Bacillus subtilis with DNA probed by NMR spectroscopy.
    4. RTP interacts with B. subtilis replication machinery in a manner that directly contributes to the fork arrest mechanism.
      Title: DNA replication fork arrest by the Bacillus subtilis RTP-DNA complex involves a mechanism that is independent of the affinity of RTP-DNA binding.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    replication terminator protein
    NP_389731.1
    • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11313334, 15657033, 16822523, 17376071, 17521668, 24946150; Product type f : factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000964.3 Reference assembly

      Range
      2017886..2018254 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_389731.1 replication terminator protein [Bacillus subtilis subsp. subtilis str. 168]

      See identical proteins and their annotated locations for NP_389731.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A1M464
      Conserved Domains (1) summary
      pfam02334
      Location:10 → 122
      RTP; Replication terminator protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CI76.1

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    Research Materials