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    cspE transcription antiterminator/RNA stability regulator CspE [ Raoultella ornithinolytica ]

    Gene ID: 93755331, updated on 10-Oct-2024

    Summary

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    Gene symbol
    cspE
    Gene description
    transcription antiterminator/RNA stability regulator CspE
    Locus tag
    Q1L34_RS19115
    Gene type
    protein coding
    Organism
    Raoultella ornithinolytica (strain: RoM27LC23)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Raoultella
    Also known as
    gicA; msmC
    Old locus tag
    Q1L34_19110
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    Genomic context

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    NZ_CP130153.1Genomic Context describing neighboring genes Neighboring gene deaminated glutathione amidase Neighboring gene fluoride efflux transporter CrcB Neighboring gene lipid IV(A) palmitoyltransferase PagP Neighboring gene anaerobic C4-dicarboxylate transporter DcuC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP130153.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Specificity of DNA binding and dimerization by CspE from Escherichia coli. Johnston D, et al. J Biol Chem, 2006 Dec 29. PMID 17088256
    2. Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase E. Feng Y, et al. J Biol Chem, 2001 Aug 24. PMID 11390393
    3. Escherichia coli CspA-family RNA chaperones are transcription antiterminators. Bae W, et al. Proc Natl Acad Sci U S A, 2000 Jul 5. PMID 10884409, Free PMC Article
    4. Sequence-selective interactions with RNA by CspB, CspC and CspE, members of the CspA family of Escherichia coli. Phadtare S, et al. Mol Microbiol, 1999 Sep. PMID 10476034
    5. Co-existence of tmexCD2-toprJ2 and bla(NDM-1) on a single plasmid carried by Raoultella ornithinolytica isolated from public garbage bins. Li J, et al. J Glob Antimicrob Resist, 2024 Jun. PMID 38408560

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    transcription antiterminator/RNA stability regulator CspE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP130153.1 Reference assembly

      Range
      3993897..3994106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004859511.1 MULTISPECIES: transcription antiterminator/RNA stability regulator CspE [Enterobacteriaceae]

      See identical proteins and their annotated locations for WP_004859511.1

      UniProtKB/TrEMBL
      A0A038CQA5, A0A3N1IYG8, A0A3N2EB22, A0A3N2ENZ6, A0A4V2W6X9, A0A6L6Y1G9, A0A7G8QT63, A0A8B4Z4W1, A0AAJ5QS95, A0AAN5L1L1, A0AAP1MKB7, A0AAP9XMP8
    Nucleotide Protein
    Heading Accession and Version