U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GKD17_RS05200 PaaI family thioesterase [ Phocaeicola dorei ]

    Gene ID: 93446091, updated on 9-Jan-2025

    Summary

    Go to the top of the page Help
    Gene symbol
    GKD17_RS05200
    Gene description
    PaaI family thioesterase
    Locus tag
    GKD17_RS05200
    Gene type
    protein coding
    Organism
    Phocaeicola dorei (strain: DSM 17855, nat-host: Homo sapiens, culture-collection: DSM:17855, type-material: type strain of Bacteroides dorei)
    Lineage
    Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola
    Old locus tag
    GKD17_05245
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help

    NZ_CP046176.1Genomic Context describing neighboring genes Neighboring gene transglycosylase SLT domain-containing protein Neighboring gene Dabb family protein Neighboring gene uridine kinase Neighboring gene ATP phosphoribosyltransferase Neighboring gene histidinol dehydrogenase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NZ_CP046176.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A novel induced-fit reaction mechanism of asymmetric hot dog thioesterase PAAI. Kunishima N, et al. J Mol Biol, 2005 Sep 9. PMID 16061252
    2. The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases. Dillon SC, et al. BMC Bioinformatics, 2004 Aug 12. PMID 15307895, Free PMC Article
    3. Mobile Type VI secretion system loci of the gut Bacteroidales display extensive intra-ecosystem transfer, multi-species spread and geographical clustering. García-Bayona L, et al. PLoS Genet, 2021 Apr. PMID 33901198, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    PaaI family thioesterase
    WP_007837299.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP046176.1 Reference assembly

      Range
      1338803..1339294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_007837299.1 MULTISPECIES: PaaI family thioesterase [Phocaeicola]

      See identical proteins and their annotated locations for WP_007837299.1

      UniProtKB/TrEMBL
      A0A076IL49, B6W223, C3R6I2, I8WKB6, I9G119
    Nucleotide Protein
    Heading Accession and Version