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    LOC9304136 palmitoyl-protein thioesterase 1 [ Arabidopsis lyrata subsp. lyrata ]

    Gene ID: 9304136, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC9304136
    Gene description
    palmitoyl-protein thioesterase 1
    Locus tag
    ARALYDRAFT_493131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See LOC9304136 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302549.1 (11484069..11486801)

    NW_003302549.1Genomic Context describing neighboring genes Neighboring gene palmitoyl-protein thioesterase 1 Neighboring gene cold shock domain-containing protein 4 Neighboring gene palmitoyl-protein thioesterase 1 Neighboring gene homeobox-leucine zipper protein HAT1 Neighboring gene uncharacterized LOC110226044

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003302549 Unplaced Scaffold Reference v.1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables thiolester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: palmitoyl-protein thioesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v.1.0 Primary Assembly

    Genomic

    1. NW_003302549.1 Reference v.1.0 Primary Assembly

      Range
      11484069..11486801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021018552.1 → XP_020874211.1  LOW QUALITY PROTEIN: palmitoyl-protein thioesterase 1

      Conserved Domains (1) summary
      PLN02606
      Location:1 → 306
      PLN02606; palmitoyl-protein thioesterase
    Nucleotide Protein
    Heading Accession and Version

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