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    LOC9269435 formin-like protein 6 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 9269435, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC9269435
    Gene description
    formin-like protein 6
    Locus tag
    OSNPB_080280200
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    FH6; OsFH6; OsJ_025644; OJ1003_E05.5-1
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    Genomic context

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    See LOC9269435 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (10979680..10990142)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (10922402..10935862)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator ORR33-like Neighboring gene purple acid phosphatase 23 Neighboring gene uncharacterized LOC112936194 Neighboring gene uncharacterized LOC136351482 Neighboring gene probable metal-nicotianamine transporter YSL17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    formin-like protein 6
    Names
    LOC_Os08g17820
    P0026A08.31-1
    putative diaphanous 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424293.1 → NP_001411222.1  formin-like protein 6

      Status: VALIDATED

      Source sequence(s)
      AK069036, AK100610, AP014964, CI270790, CI271422
      UniProtKB/Swiss-Prot
      A3BRH2, Q0J6R0, Q6ZCX3
      UniProtKB/TrEMBL
      B8B912

    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      10979680..10990142
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015793025.3 → XP_015648511.1  formin-like protein 6 isoform X1

      UniProtKB/TrEMBL
      B8B912
      Conserved Domains (2) summary
      pfam02181
      Location:932 → 1200
      FH2; Formin Homology 2 Domain
      pfam10409
      Location:199 → 337
      PTEN_C2; C2 domain of PTEN tumour-suppressor protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ZCX3.2 GenPept UniProtKB/Swiss-Prot:Q6ZCX3

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