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    Cbr-nkb-2 Protein CBR-NKB-2 [ Caenorhabditis briggsae ]

    Gene ID: 8576424, updated on 6-Jun-2024

    Summary

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    Gene symbol
    Cbr-nkb-2
    Gene description
    Protein CBR-NKB-2
    Locus tag
    CBG_04440
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis briggsae (strain: AF16)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Cbr-nkb-2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_013487.2 (12201415..12203014, complement)

    Chromosome IV - NC_013487.2Genomic Context describing neighboring genes Neighboring gene Protein CBG04438 Neighboring gene Protein CBG04439 Neighboring gene Protein CBG04441 Neighboring gene Protein CBG26469

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013487.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular potassium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular sodium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in potassium ion import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion export across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sodium:potassium-exchanging ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein CBR-NKB-2
    XP_002634429.1
    • C. briggsae CBR-NKB-2 protein; contains similarity to Pfam domain PF00287 Sodium / potassium ATPase beta chain contains similarity to Interpro domain IPR000402 (ATPase, P-type cation exchange, beta subunit);
      Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013487.2 Reference assembly

      Range
      12201415..12203014 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002634383.1 → XP_002634429.1  Protein CBR-NKB-2 [Caenorhabditis briggsae]

      See identical proteins and their annotated locations for XP_002634429.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAE9D6M8, A0AAE9JHZ6, A8WXK1
      Conserved Domains (1) summary
      cl08255
      Location:105 → 343
      Na_K-ATPase; Sodium / potassium ATPase beta chain
    Nucleotide Protein
    Heading Accession and Version

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