U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PPK1 putative protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844108, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PPK1
    Official Full Name
    putative protein kinase 1
    Primary source
    TAIR:AT1G77720
    Locus tag
    AT1G77720
    See related
    Araport:AT1G77720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    putative protein kinase 1; T32E8.5; T32E8_5
    Summary
    Encodes a predicted protein kinase based on sequence similarity.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PPK1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (29210496..29214135)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene Pleckstrin homology (PH) domain superfamily protein Neighboring gene phosphatidylinositol-4-phosphate 5-kinase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. PPKs mediate direct signal transfer from phytochrome photoreceptors to transcription factor PIF3. Ni W, et al. Nat Commun, 2017 May 11. PMID 28492231, Free PMC Article
    2. Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. Nemoto K, et al. Phytochemistry, 2011 Jul. PMID 21477822
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_106421.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables MAP kinase kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity HDA PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein autophosphorylation HDA PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative protein kinase 1
    NP_565160.3
    • putative protein kinase 1 (PPK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: MAPK/ERK kinase kinase 3 (TAIR:AT4G08470.1); Has 102737 Blast hits to 99628 proteins in 3502 species: Archae - 97; Bacteria - 12996; Metazoa - 35733; Fungi - 11774; Plants - 22485; Viruses - 236; Other Eukaryotes - 19416 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29210496..29214135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106421.5 → NP_565160.3  putative protein kinase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565160.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84VX4, Q8LA38, Q9CA22
      UniProtKB/TrEMBL
      A0A178W4E7, A0A7G2E9M8
      Conserved Domains (1) summary
      cd14131
      Location:398 → 693
      PKc_Mps1; Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84VX4.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools