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    CK1 choline kinase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843500, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CK1
    Official Full Name
    choline kinase 1
    Primary source
    TAIR:AT1G71697
    Locus tag
    AT1G71697
    See related
    Araport:AT1G71697
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCK1; CHOLINE KINASE; choline kinase 1; CK; F14O23.8; F14O23_8
    Summary
    Encodes choline kinase. mRNA levels are increased in response to wounding.
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    Genomic context

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    See CK1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (26970968..26973464)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Peroxidase superfamily protein Neighboring gene carboxypeptidase D Neighboring gene tRNA-Gly Neighboring gene DNAse I-like superfamily protein Neighboring gene ncRNA Neighboring gene Nucleic acid-binding proteins superfamily Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Jasmonic acid-dependent and -independent signaling pathways control wound-induced gene activation in Arabidopsis thaliana. Titarenko E, et al. Plant Physiol, 1997 Oct. PMID 9342878, Free PMC Article
    2. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105828.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables choline kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    choline kinase 1
    NP_177315.1
    • choline kinase 1 (CK1); FUNCTIONS IN: choline kinase activity; INVOLVED IN: response to salt stress, response to wounding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Choline kinase, N-terminal (InterPro:IPR007521), Choline/ethanolamine kinase (InterPro:IPR002573), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G09760.1); Has 1492 Blast hits to 1438 proteins in 366 species: Archae - 0; Bacteria - 350; Metazoa - 439; Fungi - 247; Plants - 163; Viruses - 0; Other Eukaryotes - 293 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26970968..26973464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105828.4 → NP_177315.1  choline kinase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177315.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9J3, Q9M9H6
      UniProtKB/TrEMBL
      A0A178WJ96, A0A5S9WTR2
      Conserved Domains (1) summary
      PLN02236
      Location:1 → 344
      PLN02236; choline kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M9H6.1

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