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    CAB3 chlorophyll A/B binding protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839869, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CAB3
    Official Full Name
    chlorophyll A/B binding protein 3
    Primary source
    TAIR:AT1G29910
    Locus tag
    AT1G29910
    See related
    Araport:AT1G29910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AB180; CELLULOSE SYNTHASE LIKE B3; chlorophyll A/B binding protein 3; CSLB3; F1N18.5; LHCB1.2; LIGHT HARVESTING CHLOROPHYLL A/B BINDING PROTEIN 1.2
    Summary
    member of Chlorophyll a/b-binding protein family
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    Genomic context

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    See CAB3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (10472280..10473502, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene O-acetyltransferase family protein Neighboring gene carbamoyl phosphate synthetase B Neighboring gene chlorophyll A/B-binding protein 2 Neighboring gene chlorophyll A/B binding protein 1 Neighboring gene nuclear RNA polymerase A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phytochrome-regulated expression of genes encoding light-harvesting chlorophyll a/b-protein in two long hypocotyl mutants and wild type plants of Arabidopsis thaliana. Sun L, et al. Photochem Photobiol, 1990 Jul. PMID 2204948
    2. The SCO2 protein disulphide isomerase is required for thylakoid biogenesis and interacts with LHCB1 chlorophyll a/b binding proteins which affects chlorophyll biosynthesis in Arabidopsis seedlings. Tanz SK, et al. Plant J, 2012 Mar. PMID 22040291
    3. Regulation of Active DNA Demethylation by a Methyl-CpG-Binding Domain Protein in Arabidopsis thaliana. Li Q, et al. PLoS Genet, 2015 May. PMID 25933434, Free PMC Article
    4. Tocopherol cyclase (VTE1) localization and vitamin E accumulation in chloroplast plastoglobule lipoprotein particles. Vidi PA, et al. J Biol Chem, 2006 Apr 21. PMID 16414959
    5. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_102731.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables chlorophyll binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables chlorophyll binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in photosynthesis, light harvesting IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    NOT located_in Golgi apparatus RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast thylakoid HDA PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 
    located_in mitochondrion HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in plastoglobule HDA PubMed 
    located_in thylakoid HDA PubMed 

    General protein information

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    Preferred Names
    chlorophyll A/B binding protein 3
    NP_564339.1
    • chlorophyll A/B binding protein 3 (CAB3); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, light harvesting, photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: cotyledon, guard cell, juvenile leaf, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: chlorophyll A/B-binding protein 2 (TAIR:AT1G29920.1); Has 2420 Blast hits to 2340 proteins in 222 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 2091; Viruses - 0; Other Eukaryotes - 325 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10472280..10473502 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102731.3 → NP_564339.1  chlorophyll A/B binding protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564339.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P04777, P0CJ48, P83754, Q8VZ87
      UniProtKB/TrEMBL
      A0A178W2T0, A0A178WFB8, A0A5S9WCI0
      Conserved Domains (1) summary
      PLN00025
      Location:5 → 267
      PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CJ48.1
    Q8VZ87.2

    Gene LinkOut

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    Research Materials