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    golgin family A protein (DUF1664) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839346, updated on 18-Sep-2024

    Summary

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    Official Full Name
    golgin family A protein (DUF1664)
    Primary source
    TAIR:AT1G04960
    Locus tag
    AT1G04960
    See related
    Araport:AT1G04960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13M7.5; F13M7_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (1407772..1410933, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene HIT-type Zinc finger family protein Neighboring gene translocon at the inner envelope membrane of chloroplasts 20 Neighboring gene TATA BOX ASSOCIATED FACTOR II 59 Neighboring gene lipid-binding serum glycoprotein family protein Neighboring gene PDI-like 2-2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001083992.2
    NM_100374.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    golgin family A protein (DUF1664)
    NP_001077461.1
    • Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G27000.1); Has 160 Blast hits to 159 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_563723.1
    • Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G27000.1); Has 160 Blast hits to 159 proteins in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 152; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1407772..1410933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001083992.2 → NP_001077461.1  golgin family A protein (DUF1664) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0ME55, A8MRN9
      Conserved Domains (1) summary
      pfam07889
      Location:109 → 230
      DUF1664; Protein of unknown function (DUF1664)

    2. NM_100374.3 → NP_563723.1  golgin family A protein (DUF1664) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563723.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ83, A0ME55, Q9MAU4
      Conserved Domains (1) summary
      pfam07889
      Location:92 → 213
      DUF1664; Protein of unknown function (DUF1664)
    Nucleotide Protein
    Heading Accession and Version

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