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    cyclin-D1-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838904, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cyclin-D1-binding protein
    Primary source
    TAIR:AT1G22970
    Locus tag
    AT1G22970
    See related
    Araport:AT1G22970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19G10.8; F19G10_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (8130598..8132435, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene thiamine biosynthesis protein Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Grap2/cyclin-D-interacting protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Heavy metal transport/detoxification superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    2. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001332569.1
    NM_001332570.1
    NM_001332571.1
    NM_102144.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cyclin-D1-binding protein
    NP_173710.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8130598..8132435 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102144.3 → NP_173710.1  cyclin-D1-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173710.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WB97, A0A654ECF6, O23126
      Conserved Domains (1) summary
      pfam13324
      Location:42 → 307
      GCIP; Grap2 and cyclin-D-interacting

    2. NM_001332569.1 → NP_001322163.1  cyclin-D1-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT61, A0A654ECF6

    3. NM_001332570.1 → NP_001322164.1  cyclin-D1-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT63, A0A654ECF6

    4. NM_001332571.1 → NP_001322165.1  cyclin-D1-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AT61, A0A654ECF6
    Nucleotide Protein
    Heading Accession and Version

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