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    hypothetical protein (DUF1204) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838629, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF1204)
    Primary source
    TAIR:AT1G20400
    Locus tag
    AT1G20400
    See related
    Araport:AT1G20400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5M15.25; F5M15_25
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (7072192..7076619, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Prolyl oligopeptidase family protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene Pseudouridine synthase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF1204)
    NP_173465.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1204 (InterPro:IPR009596); BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G15420.1); Has 2374 Blast hits to 2027 proteins in 308 species: Archae - 22; Bacteria - 170; Metazoa - 962; Fungi - 207; Plants - 198; Viruses - 74; Other Eukaryotes - 741 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7072192..7076619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101891.2 → NP_173465.1  hypothetical protein (DUF1204) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173465.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HSS6, Q9LMV2
      Conserved Domains (1) summary
      pfam06721
      Location:717 → 944
      DUF1204; Protein of unknown function (DUF1204)
    Nucleotide Protein
    Heading Accession and Version

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