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    THH1 tobamovirus multiplication-like protein (DUF1084) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838015, updated on 18-Sep-2024

    Summary

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    Official Symbol
    THH1
    Official Full Name
    tobamovirus multiplication-like protein (DUF1084)
    Primary source
    TAIR:AT1G14530
    Locus tag
    AT1G14530
    See related
    Araport:AT1G14530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14L17.31; F14L17_31; TOM THREE HOMOLOG 1
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    Genomic context

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    See THH1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (4970858..4973726, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene myo-inositol oxygenase 1 Neighboring gene Peroxidase superfamily protein Neighboring gene Peroxidase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Involvement of THH1, an Arabidopsis thaliana homologue of the TOM1 gene, in tobamovirus multiplication. Fujisaki K, et al. J Gen Virol, 2006 Aug. PMID 16847136
    2. Complete inhibition of tobamovirus multiplication by simultaneous mutations in two homologous host genes. Yamanaka T, et al. J Virol, 2002 Mar. PMID 11836427, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results suggest that THH1 supports tobamovirus multiplication, but to a lesser extent than TOM1 and TOM3.
      Title: Involvement of THH1, an Arabidopsis thaliana homologue of the TOM1 gene, in tobamovirus multiplication.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001332124.1
    NM_179330.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables virion binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type vacuole membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    tobamovirus multiplication-like protein (DUF1084)
    NP_001319003.1
    • TOM THREE HOMOLOG 1 (THH1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 257 Blast hits to 256 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).
    NP_849661.1
    • TOM THREE HOMOLOG 1 (THH1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication protein 3 (TAIR:AT2G02180.1); Has 257 Blast hits to 256 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4970858..4973726 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332124.1 → NP_001319003.1  tobamovirus multiplication-like protein (DUF1084) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZEB0, A0A654E9Q0

    2. NM_179330.4 → NP_849661.1  tobamovirus multiplication-like protein (DUF1084) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849661.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84WT2, Q8LFE7, Q948R8, Q9M9R0, Q9MA29
      UniProtKB/TrEMBL
      A0A654E9Q0
      Conserved Domains (1) summary
      pfam06454
      Location:21 → 291
      DUF1084; Protein of unknown function (DUF1084)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q948R8.1

    Gene LinkOut

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