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    ENTH/VHS family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836642, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ENTH/VHS family protein
    Primary source
    TAIR:AT5G65180
    Locus tag
    AT5G65180
    See related
    Araport:AT5G65180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQN23.12; MQN23_12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (26045327..26048031)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene succinate dehydrogenase 2-3 Neighboring gene VQ motif-containing protein Neighboring gene plant U-box 38 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_125916.3
    NM_203267.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ENTH/VHS family protein
    NP_569007.1
    • ENTH/VHS family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G10060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974996.1
    • ENTH/VHS family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT5G10060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26045327..26048031
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_203267.2 → NP_974996.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974996.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DHK1, F4KGJ9
      Conserved Domains (1) summary
      cl20817
      Location:50 → 156
      GBP_C; Guanylate-binding protein, C-terminal domain

    2. NM_125916.3 → NP_569007.1  ENTH/VHS family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_569007.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAS8, A0A7G2FPU1, Q9FJP7
      Conserved Domains (2) summary
      PRK03918
      Location:197 → 288
      PRK03918; DNA double-strand break repair ATPase Rad50
      cd16981
      Location:7 → 130
      CID_RPRD_like; CID (CTD-Interacting Domain) of Regulation of nuclear pre-mRNA domain-containing proteins
    Nucleotide Protein
    Heading Accession and Version

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